Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq25975 196 9e-45 seq22281 168 1e-36 >seq25975 Length=7706 Score = 196 bits (216), Expect = 9e-45 Identities = 848/1315 (64%), Gaps = 56/1315 (4%) Strand=Plus/Minus Query 212908 GGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGG 212967 |||| || | ||| || ||||| || ||||| | || | ||| | ||| || ||||||| Sbjct 3361 GGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTATTGTATACGTTCGACGTGTAGG 3302 Query 212968 GCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCA 213027 |||||| || ||||| || ||||| || || || || || ||||| || |||| Sbjct 3301 GCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCATCGGGGCCA 3242 Query 213028 CCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCC 213087 ||| || || | | ||||||| | | || | | ||| | ||||| || Sbjct 3241 ACAGCAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCCTTCAACTCCGACCAGTTCC 3182 Query 213088 ATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGC 213147 | ||| ||| | ||||| ||||||||| || |||||| |||||| || | Sbjct 3181 A-----CAGCTCAGTCGGC-TCCTT---GTTCCACATTTCGTACTGCAGGATGCCCTTAC 3131 Query 213148 TCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACG 213207 |||| || || |||| ||| | ||| || |||| ||||| ||| ||| | Sbjct 3130 TCACCGGACTACCCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTCACAGCTAG 3071 Query 213208 CCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC-- 213265 | | ||| || || | ||||||||||| ||||| | ||| ||||| | ||||| Sbjct 3070 CTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTTGAGCCTCCT 3011 Query 213266 ----TGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCC 213321 | | ||| || |||| | ||| ||| |||| |||| ||||| || | Sbjct 3010 CGCTTTCGTACGGATAGCGCATTAAGATG------AACGCATCGGCCATTCCCTGAACAC 2957 Query 213322 CGATGCCGATGGGTCTGTGTCTCAGGTTAGA---CTTGGAGCACTCCTCCAAGGGGTAAA 213378 | || |||||||||| ||| | || ||| || ||| ||| |||| | || || Sbjct 2956 CTATACCGATGGGTCGGTGGCGCATGTTGGAGCGCTT--AGC-CTCCGGGACAGGATAGT 2900 Query 213379 AGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGT 213438 ||||| || ||||||||||| || ||||| || | | || | ||| | ||| | Sbjct 2899 AGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTATCTTAGCGACTTCCTTCAGCT 2840 Query 213439 ACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCA 213498 | || | | |||| | | || |||||| || || || ||||| Sbjct 2839 --TGGTAAAATCATACGTTTTATCT-TGCTTTACAAACATGTTCAAAGCAATCGAGGCCA 2783 Query 213499 GGTTGCAAACGGCCACCTC---CTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGT 213555 | ||||| || || || || || || | ||||||| || ||||||||||||| Sbjct 2782 GATTGCACACCGCTACTTCGTCCTTCGAC---GAATACTCCACAATTTCGGTGCACAGGT 2726 Query 213556 TGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTG-CGTTGGCA-GAATCCTT 213613 || ||| ||||| || | ||||| || || ||||| || | ||| | |||||| Sbjct 2725 TGGAACATTTAATGGTTCCGACATTCTGCTGATT--ACTTTTACGATTGCATGCATCCTT 2668 Query 213614 GTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTA 213673 ||| |||||||| || || || || | ||| ||| | | ||| | ||| | || Sbjct 2667 GTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCACAAGT- 2609 Query 213674 CCTG-GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCT 213732 |||| || |||||| || | | ||| | | | ||||||| ||| |||| Sbjct 2608 CCTGTGCTTTGACCTGTCGAATAA-AGCGACCCTCTTT--CTCGTACCCCGTGTACAGCT 2552 Query 213733 CGTTGAATTCGTGGCCCCA-GACCCTGTCCAGTCCCGGACAGGAT-GCG-GGACACATGA 213789 | ||| || | ||||| | ||| |||| || ||||| || | | |||||||| | Sbjct 2551 TCTCGAACTCTTCACCCCACGTATCTG-CCAGACCGGGACA--ATCGTGTGGACACATCA 2495 Query 213790 GGCTCCAG-TCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCG 213848 ||||||| | | || ||| || | || ||||||||| ||||| | |||||| ||| Sbjct 2494 GGCTCCACATTTCATTCGCCTCC-ACACGCTTCATGAACAGATCCGGTATCCACAGAGCG 2436 Query 213849 GTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAG 213908 ||||| ||| | || | ||| ||| |||| |||||| ||||| ||||| Sbjct 2435 TAGAACATGTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAAC 2376 Query 213909 TCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG--- 213965 || || | || | |||||||| |||| |||||||| || || || ||||| ||| Sbjct 2375 TCGAATACATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTGTTG 2316 Query 213966 CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025 |||||||| ||||| || ||| ||||| | | |||||| | || |||| ||| Sbjct 2315 CCGCCCTGATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCG 2256 Query 214026 TTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAG 214085 || || ||||| || || | || || | || || | | | | || | Sbjct 2255 TTTGAAATACCGTTTGTGCCGGAGATGTATGTTCCCTTCGCGCGGATGCAGTGCACGTTC 2196 Query 214086 AGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATG 214145 ||||| ||||||||||| |||| || |||| || || || ||| ||| || || Sbjct 2195 AGCCCAATGCCACCGGCCGACTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATA 2136 Query 214146 CCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCC 214200 || | ||||| ||||| | | | |||||| || ||| |||||||| |||| Sbjct 2135 CCCTCAATGCTATCATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCC 2081 >seq22281 Length=11977 Score = 168 bits (186), Expect = 1e-36 Identities = 286/414 (69%), Gaps = 3/414 (1%) Strand=Plus/Plus Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 ||||| |||| || || |||||||||| | ||||| || | ||||||||| | Sbjct 2885 CAGCAAACGATCAGCCACAAACTCGATGTACTGCGACATCAGATCGCAGTTCATGCCAAG 2944 Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 | | ||||||| ||||| || | ||||||| ||| ||| || || || | | Sbjct 2945 CATGTCAACGGGCAGTGCCTTCGTCAAGAACTCCTGCTCGATCACAACCGCATCGCGAAT 3004 Query 48073 AATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132 ||| | | | ||||| || || || || | ||| | |||| | | || ||| Sbjct 3005 AATGTCCGTCACGCGCTCCTTCGACGGCTTCTGCACCAGATACTTGA---ACATCAGGCA 3061 Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192 ||| ||||| | ||||| |||||||| || || ||| |||| |||||| ||| || Sbjct 3062 GGCGAAGTCGCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGTGAGTCC 3121 Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252 ||||| | || | || |||||||||||||| | ||||| ||| ||||||||| Sbjct 3122 CGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTGCCGCTGAAGAAGAT 3181 Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312 || || || || ||||| || || | ||| ||||| ||| |||||| ||||| Sbjct 3182 ACCTTCGACGGCGGCGAAAGCCACGACACGCTCACCGAAGTTAGCCTTCTTGCTGGAGAT 3241 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 |||| ||||||||||| ||||||||||| | ||| |||| ||| || ||||| Sbjct 3242 CCAGTTTAGCGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCGTTTCGATGGC 3295 Score = 114 bits (126), Expect = 2e-20 Identities = 173/246 (70%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 48412 GAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAA 48471 || |||| || ||||||||| |||||| || || || || ||||||||||||||||| Sbjct 3427 GATCAGCAGTGAGTACATCTCGCTGTGCACGTTTTCCATCGCAATCTGGAACCCGTAGAA 3486 Query 48472 GGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGAC 48531 | || || ||||| || || | || | |||| ||||||||| || || Sbjct 3487 ACAGCGTGCTTCCGTTACCTGTACCTCCTGGCTAAAGCGTTCCACCAGATTCTCGTTCAC 3546 Query 48532 TATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTG 48591 || ||||| ||||| |||||||||||||| || || || ||| || || ||| | | Sbjct 3547 GATGCCATCGGAAGCGGCAAAGAAGGCAAGCACGTGGGAAATGAAGTGACGTTCGCTCGG 3606 Query 48592 GGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAA 48651 | || |||| |||| ||| | || ||| ||| || || || ||||| |||||||| Sbjct 3607 TTTCAGCGCATCCCAGTCCTTCATATCCTTGGACAGATCAACCTCCTCCACCGTCCAGAA 3666 Query 48652 GGACGC 48657 || || Sbjct 3667 CGAAGC 3672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931179178504960