Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 176 8e-39
seq22281 93.3 8e-14
>seq25975
Length=7706
Score = 176 bits (194), Expect = 8e-39
Identities = 733/1139 (64%), Gaps = 36/1139 (3%)
Strand=Plus/Minus
Query 221510 TCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCC-GC 221568
||||||| |||||| || || ||||||||||| | ||| | | ||||||| ||| ||
Sbjct 2975 TCGGCCATTCCCTGAACACCTATACCGATGGGTCGGTGGCGCATGTTGGA-GCGCTTAGC 2917
Query 221569 TTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTT 221628
|| || || ||||| ||||||| || || | ||||| || || | || | | ||
Sbjct 2916 CTCCGGGACAGGATAGTAGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTATCTT 2857
Query 221629 AACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTC 221688
| | || || ||||||| ||| || | || ||| | | ||
Sbjct 2856 AGCGACTTCCTTCAGCTT--GGT-----AAAATCATA-------CGTTTTATCTTGCTTT 2811
Query 221689 CACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGT 221748
||||| ||| | |||| |||||| || ||||| || || |||||||| |
Sbjct 2810 -ACAAACATGTTCAAAGCAATCGAGGCCAGATTGCACACCGCTACTTCGTCCTTCGACGA 2752
Query 221749 ATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATT 221808
||||| | || || || || |||||| || || ||||| || | | | |||||
Sbjct 2751 ATACTCCACAATTTCGGTGCACAGGTTGGAACATTTAATGGTTCCGACATTCTGCTGATT 2692
Query 221809 AGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGC 221868
| || |||||| || |||||||| ||||| | || |||| || |||| ||| |
Sbjct 2691 ACTTTTACGATTGCATGCATCCTTGTACAGCATGTATGGTACGCCCGTTTCCACCTGCGA 2632
Query 221869 CACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGT 221928
| | | ||| | ||| | || ||| ||| | ||| | || | | | | |
Sbjct 2631 CTCGATGATCGCGAACCACAAGTC-CTGT-GCTTT--GACCTGTCGAATAAAGCGACCCT 2576
Query 221929 CTTT-TCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTG 221987
|||| || ||||| || || ||| | || |||| |||||| ||| || |||| || |
Sbjct 2575 CTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCACCCCACGTATCTGCCAGACCGG 2516
Query 221988 GACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGA 222047
|||| | ||||||||||| ||||| | || | | || | || |||||| |
Sbjct 2515 GACAATCGTGTGGACACATCAGGCTCCACATTTCATTCGCCTCCACACGCTTCATGAACA 2456
Query 222048 GGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGT 222107
| ||||| |||||||| || | || | || | || || ||| ||| ||| |||
Sbjct 2455 GATCCGGTATCCACAGAGCGTAGAACATGTCGCGGGCACGGACCTCTTCCTTGCCAGTGT 2396
Query 222108 TTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCA 222167
||||| | ||||| | |||||| || | ||| | |||||||| |||||||||| ||| |
Sbjct 2395 TTTTCTTTAGATCGAGAAACTCGAATACATCACCATGCCACGGTTCCAGATAGATGGCGA 2336
Query 222168 GAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGC 222227
|| || || | |||||||| ||||||||||| || || | |||| | | ||
Sbjct 2335 ATGCTCCAGGCCTTTTGTTGCCGCCCTGATCCACGTACCGTGCCGTATTGTTGTACACGC 2276
Query 222228 GAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGG 222287
| || |||| |||| |||||| || |||||| ||||| ||||| | || |
Sbjct 2275 GCAGCATCGGCACCAATCCGTTTGAAATACCGTTTGTGCCGGAGATGTATGTTCCCTTCG 2216
Query 222288 CCCTCAGGTTACTG-GCA--GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGC 222344
| | || | | | ||| || || || |||||||| || || |||| || |
Sbjct 2215 CGC---GGATGCAGTGCACGTTCAGCCCAATGCCACCGGCCGACTTTGAAATCAGCGCAC 2159
Query 222345 AGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAAC 222404
| ||| ||||| || || ||||| || || || | | ||||||||||||
Sbjct 2158 ATTGCTTCAGAGTATCGTAAATACCCTCAATGCTATCATCAGACATGGTCAGCAGAAAAC 2099
Query 222405 AAGACGACATCTGAGATTTGGTG-GAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTA 222463
| || || | ||||| | || | | || ||||| || || |||||| |||
Sbjct 2098 AGGAAGAGAGCTGAG-GCCGCTGCGTAGCCGCTGCAAACATGGTCGGTGAGGCGTGGGTA 2040
Query 222464 AAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGA 222523
||||||| ||||| ||||| ||||| || | || ||||||| || |||||
Sbjct 2039 AAGTAGCGTTCAGACAGCAGATTATACGTTTCGATCGCTGCATCGATGTTTTCACCGTGG 1980
Query 222524 ATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCACA---GGACCCTTGGAG 222580
|| || ||| | ||| ||| | ||| || | ||| ||| |||||| |
Sbjct 1979 ATGCCGATAGCGACGCGCATCAGCATATGCTGTGGTCGCTCAACAATTTTACCCTT-TAT 1921
Query 222581 CTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTC 222639
|| ||||| ||| ||| ||||| || || || || || |||||| |||||||
Sbjct 1920 CT--TGAGCAAGTATGATCGTTCCAATGTTTTAAAGCCGAAATAGTTGTACCCAAAGTC 1864
>seq22281
Length=11977
Score = 93.3 bits (102), Expect = 8e-14
Identities = 170/249 (68%), Gaps = 0/249 (0%)
Strand=Plus/Minus
Query 25786 CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAG 25845
|||||| ||||||||| | || || | |||| |||||| ||||| | ||
Sbjct 3304 CTGTTTAATGCCATCGAAACGCTGCCGTGCGTGAAGAAGAAGGCTGACTGGGCGCTAAAC 3245
Query 25846 TGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAG 25905
|||||| |||| ||| |||| || || ||||| | || || || || || || ||
Sbjct 3244 TGGATCTCCAGCAAGAAGGCTAACTTCGGTGAGCGTGTCGTGGCTTTCGCCGCCGTCGAA 3185
Query 25906 GGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATG 25965
|| ||||| |||||||| || || |||| |||||||||||| || || |||
Sbjct 3184 GGTATCTTCTTCAGCGGCAGCTTCGCTTCCATTTTCTGGCTCAAGAAGCGTGGCCTGATG 3125
Query 25966 CCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTT 26025
|| || || ||| || |||||||| || | ||||| || || ||| | || ||
Sbjct 3124 CCGGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGACGAAGGGCTGCACTGCGACTTC 3065
Query 26026 GCCTGCCTG 26034
|||||||||
Sbjct 3064 GCCTGCCTG 3056
Score = 89.7 bits (98), Expect = 1e-12
Identities = 157/226 (69%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCT-ATCCA 25570
|||||| | || ||| |||||||| ||||||| ||| | | |||| | || || | |
Sbjct 3664 CTGGACGGTGGAGGAGGTTGATCTGTCCAAGGATATGAAGGACTGGGATGCGCTGAAACC 3605
Query 25571 AAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAG 25630
|| ||| | || || | ||||| | || |||||||| || || ||||| || |
Sbjct 3604 GAG-CGAACGTCACTTCATTTCCCACGTGCTTGCCTTCTTTGCCGCTTCCGATGGCATCG 3546
Query 25631 TGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTT 25690
|||||||||||||| || | || | | ||| || ||| ||| || ||||
Sbjct 3545 TGAACGAGAATCTGGTGGAACGCTTTAGCCAGGAGGTACAGGTAACGGAAGCACGCTGTT 3486
Query 25691 TCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTA 25736
||||||| |||||||| || || ||||| |||||| ||| ||||
Sbjct 3485 TCTACGGGTTCCAGATTGCGATGGAAAACGTGCACAGCGAGATGTA 3440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928492198903360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |