Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq25975 176 8e-39 seq22281 93.3 8e-14 >seq25975 Length=7706 Score = 176 bits (194), Expect = 8e-39 Identities = 733/1139 (64%), Gaps = 36/1139 (3%) Strand=Plus/Minus Query 221510 TCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCC-GC 221568 ||||||| |||||| || || ||||||||||| | ||| | | ||||||| ||| || Sbjct 2975 TCGGCCATTCCCTGAACACCTATACCGATGGGTCGGTGGCGCATGTTGGA-GCGCTTAGC 2917 Query 221569 TTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTT 221628 || || || ||||| ||||||| || || | ||||| || || | || | | || Sbjct 2916 CTCCGGGACAGGATAGTAGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTATCTT 2857 Query 221629 AACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTC 221688 | | || || ||||||| ||| || | || ||| | | || Sbjct 2856 AGCGACTTCCTTCAGCTT--GGT-----AAAATCATA-------CGTTTTATCTTGCTTT 2811 Query 221689 CACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGT 221748 ||||| ||| | |||| |||||| || ||||| || || |||||||| | Sbjct 2810 -ACAAACATGTTCAAAGCAATCGAGGCCAGATTGCACACCGCTACTTCGTCCTTCGACGA 2752 Query 221749 ATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATT 221808 ||||| | || || || || |||||| || || ||||| || | | | ||||| Sbjct 2751 ATACTCCACAATTTCGGTGCACAGGTTGGAACATTTAATGGTTCCGACATTCTGCTGATT 2692 Query 221809 AGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGC 221868 | || |||||| || |||||||| ||||| | || |||| || |||| ||| | Sbjct 2691 ACTTTTACGATTGCATGCATCCTTGTACAGCATGTATGGTACGCCCGTTTCCACCTGCGA 2632 Query 221869 CACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGT 221928 | | | ||| | ||| | || ||| ||| | ||| | || | | | | | Sbjct 2631 CTCGATGATCGCGAACCACAAGTC-CTGT-GCTTT--GACCTGTCGAATAAAGCGACCCT 2576 Query 221929 CTTT-TCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTG 221987 |||| || ||||| || || ||| | || |||| |||||| ||| || |||| || | Sbjct 2575 CTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCACCCCACGTATCTGCCAGACCGG 2516 Query 221988 GACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGA 222047 |||| | ||||||||||| ||||| | || | | || | || |||||| | Sbjct 2515 GACAATCGTGTGGACACATCAGGCTCCACATTTCATTCGCCTCCACACGCTTCATGAACA 2456 Query 222048 GGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGT 222107 | ||||| |||||||| || | || | || | || || ||| ||| ||| ||| Sbjct 2455 GATCCGGTATCCACAGAGCGTAGAACATGTCGCGGGCACGGACCTCTTCCTTGCCAGTGT 2396 Query 222108 TTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCA 222167 ||||| | ||||| | |||||| || | ||| | |||||||| |||||||||| ||| | Sbjct 2395 TTTTCTTTAGATCGAGAAACTCGAATACATCACCATGCCACGGTTCCAGATAGATGGCGA 2336 Query 222168 GAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGC 222227 || || || | |||||||| ||||||||||| || || | |||| | | || Sbjct 2335 ATGCTCCAGGCCTTTTGTTGCCGCCCTGATCCACGTACCGTGCCGTATTGTTGTACACGC 2276 Query 222228 GAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGG 222287 | || |||| |||| |||||| || |||||| ||||| ||||| | || | Sbjct 2275 GCAGCATCGGCACCAATCCGTTTGAAATACCGTTTGTGCCGGAGATGTATGTTCCCTTCG 2216 Query 222288 CCCTCAGGTTACTG-GCA--GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGC 222344 | | || | | | ||| || || || |||||||| || || |||| || | Sbjct 2215 CGC---GGATGCAGTGCACGTTCAGCCCAATGCCACCGGCCGACTTTGAAATCAGCGCAC 2159 Query 222345 AGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAAC 222404 | ||| ||||| || || ||||| || || || | | |||||||||||| Sbjct 2158 ATTGCTTCAGAGTATCGTAAATACCCTCAATGCTATCATCAGACATGGTCAGCAGAAAAC 2099 Query 222405 AAGACGACATCTGAGATTTGGTG-GAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTA 222463 | || || | ||||| | || | | || ||||| || || |||||| ||| Sbjct 2098 AGGAAGAGAGCTGAG-GCCGCTGCGTAGCCGCTGCAAACATGGTCGGTGAGGCGTGGGTA 2040 Query 222464 AAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGA 222523 ||||||| ||||| ||||| ||||| || | || ||||||| || ||||| Sbjct 2039 AAGTAGCGTTCAGACAGCAGATTATACGTTTCGATCGCTGCATCGATGTTTTCACCGTGG 1980 Query 222524 ATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCACA---GGACCCTTGGAG 222580 || || ||| | ||| ||| | ||| || | ||| ||| |||||| | Sbjct 1979 ATGCCGATAGCGACGCGCATCAGCATATGCTGTGGTCGCTCAACAATTTTACCCTT-TAT 1921 Query 222581 CTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTC 222639 || ||||| ||| ||| ||||| || || || || || |||||| ||||||| Sbjct 1920 CT--TGAGCAAGTATGATCGTTCCAATGTTTTAAAGCCGAAATAGTTGTACCCAAAGTC 1864 >seq22281 Length=11977 Score = 93.3 bits (102), Expect = 8e-14 Identities = 170/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 25786 CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAG 25845 |||||| ||||||||| | || || | |||| |||||| ||||| | || Sbjct 3304 CTGTTTAATGCCATCGAAACGCTGCCGTGCGTGAAGAAGAAGGCTGACTGGGCGCTAAAC 3245 Query 25846 TGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAG 25905 |||||| |||| ||| |||| || || ||||| | || || || || || || || Sbjct 3244 TGGATCTCCAGCAAGAAGGCTAACTTCGGTGAGCGTGTCGTGGCTTTCGCCGCCGTCGAA 3185 Query 25906 GGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATG 25965 || ||||| |||||||| || || |||| |||||||||||| || || ||| Sbjct 3184 GGTATCTTCTTCAGCGGCAGCTTCGCTTCCATTTTCTGGCTCAAGAAGCGTGGCCTGATG 3125 Query 25966 CCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTT 26025 || || || ||| || |||||||| || | ||||| || || ||| | || || Sbjct 3124 CCGGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGACGAAGGGCTGCACTGCGACTTC 3065 Query 26026 GCCTGCCTG 26034 ||||||||| Sbjct 3064 GCCTGCCTG 3056 Score = 89.7 bits (98), Expect = 1e-12 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCT-ATCCA 25570 |||||| | || ||| |||||||| ||||||| ||| | | |||| | || || | | Sbjct 3664 CTGGACGGTGGAGGAGGTTGATCTGTCCAAGGATATGAAGGACTGGGATGCGCTGAAACC 3605 Query 25571 AAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAG 25630 || ||| | || || | ||||| | || |||||||| || || ||||| || | Sbjct 3604 GAG-CGAACGTCACTTCATTTCCCACGTGCTTGCCTTCTTTGCCGCTTCCGATGGCATCG 3546 Query 25631 TGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTT 25690 |||||||||||||| || | || | | ||| || ||| ||| || |||| Sbjct 3545 TGAACGAGAATCTGGTGGAACGCTTTAGCCAGGAGGTACAGGTAACGGAAGCACGCTGTT 3486 Query 25691 TCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTA 25736 ||||||| |||||||| || || ||||| |||||| ||| |||| Sbjct 3485 TCTACGGGTTCCAGATTGCGATGGAAAACGTGCACAGCGAGATGTA 3440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928492198903360