Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq29242 122 2e-22 seq734 109 1e-18 >seq29242 Length=5648 Score = 122 bits (134), Expect = 2e-22 Identities = 170/237 (72%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||| |||| ||||| | || ||||| |||||||| | || | || || ||| || Sbjct 5407 AATTAATAT-CCACCGCGCAGACGAAGAACCAGATGGAGGGTGGATTCCTTCTGAATGTT 5465 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || | || | ||| || | || ||||||||||| || | | ||| || Sbjct 5466 ATAGTCCGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTG 5525 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || ||||| || ||||| || || |||| || | ||| ||| |||||||| Sbjct 5526 ATCTGGTGGGATTCCCTCCTTATCCTGAATCTTGGCCTTGACATTCTCAATCGTATCGGA 5585 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | |||||| || ||||| || || || || || |||||||| ||||| || ||||| Sbjct 5586 TGGCTCAACCTCGAGAGTGATGGTCTTTCCGGTCAGCGTTTTCACAAAAATCTGCAT 5642 >seq734 Length=4884 Score = 109 bits (120), Expect = 1e-18 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | || ||||| |||||||| | || | || || || |||||||| Sbjct 8 ATACCACCACGCAGACGAAGGACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCC 67 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| || | || ||||||||||| || | | ||| ||||| || Sbjct 68 GACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGT 127 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||| || ||||| || || |||| || | ||| ||| |||||||| | |||| Sbjct 128 GGGATTCCCTCCTTATCCTGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCA 187 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || || || || || || || || ||||| ||||| || ||||| || Sbjct 188 ACCTCGAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACAAAAATCTGCATATT 240 Score = 86.0 bits (94), Expect = 1e-11 Identities = 163/238 (68%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAG--CCTCTTTAGAAATAT 193182 |||| || ||||| |||| ||||| |||||||||| || | || || || ||| Sbjct 2608 ATTTGCATGCCACCCTTCAACCGAAGCACCAGATGCATCGTCGATCCATGTTGGA--TAT 2665 Query 193183 TATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTT 193242 | || ||||| | | | | ||| || | || || |||||||| || | || ||| | Sbjct 2666 TGTAATCGGAGATGATCCGACCATCATCCAGCTGCTTACCGGCAAAGATAATTCGCTGCT 2725 Query 193243 GATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGG 193302 |||| || | |||||||| | || ||||||| |||| || | || | || || | Sbjct 2726 GATCCGGGGCAATTCCTTCACGTTGTTCTATTTTGTTTTTAATGTCCAACACCGTTTCCG 2785 Query 193303 AAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | | || || ||||| || || || || |||| |||||||||||| || ||||| Sbjct 2786 ACGCGATCACCTCAAGAGTGATCGTCTTTCCAGTTAACGTTTTTACAAAGATCTGCAT 2843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899312879944080