Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq18891 125 2e-23 seq25975 100 8e-16 >seq18891 Length=38368 Score = 125 bits (138), Expect = 2e-23 Identities = 173/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| || || |||||||||||||| ||||||||| | ||||| || || ||| Sbjct 25631 TCCATAGCTTTTATCAAACGACGCTGAATGTAACCAGTTTCGGCCGTTTTGACTGCAGTA 25690 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694 ||||| | ||| ||||||| |||||||| |||||| | | ||| ||| ||||| Sbjct 25691 TCAATCAAACCTTCACGACCTCCCATAGCGTGGAAGTAGAACTCGGTTGGTGTCAGCCCA 25750 Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAG 302754 ||| | | || | || ||||||||||| | ||| || || ||| |||| | ||| Sbjct 25751 GCAAGATACGAATTTTCTACGAAACCACGAGACTCAGGACCATAATCGTCCTTGATGAAG 25810 Query 302755 TGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGT 302814 |||||||| || | || | ||| | || || ||||| || || ||||||||||| Sbjct 25811 TGTGGCAGTGTGCGTTTGCGGAATCCGAACGGTATGCGCTTACCCTCTACGTTCTGCTGC 25870 Query 302815 CC 302816 || Sbjct 25871 CC 25872 >seq25975 Length=7706 Score = 100 bits (110), Expect = 8e-16 Identities = 606/962 (63%), Gaps = 21/962 (2%) Strand=Plus/Minus Query 155550 TCAAATGTTTTATCCTCATTTACAAACATACCAAGACCAATAGACGCCAGATTACATACC 155609 ||| | |||||||| | ||||||||||| | | |||| || |||||||| || ||| Sbjct 2831 TCATACGTTTTATCTTGCTTTACAAACATGTTCAAAGCAATCGAGGCCAGATTGCACACC 2772 Query 155610 GCAG--TC-TCCTTGTCGTCGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTG 155666 || || ||||| || || || || ||||| || ||||||||| |||| || Sbjct 2771 GCTACTTCGTCCTT--CGACGAA-TACTCCACAATTTCGGTGCACAGGTTGGAACATTTA 2715 Query 155667 ATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTAT 155726 ||||| || | ||||| ||| ||| ||||| || || ||||||||||| || |||||| Sbjct 2714 ATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCATCCTTGTACAGCATGTAT 2655 Query 155727 GGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATT 155786 || || || |||| ||| | || | ||| | ||| | ||| | || || | Sbjct 2654 GGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCACAAGTCCTGTGCTTTGA-- 2597 Query 155787 TGCTTGTTGTAT----CTGCCTTCCGACTCATATTTCATATACAGCGTTCGGTAATCCTC 155842 | ||| | || | || || ||| || | | |||||| | | | || || Sbjct 2596 --CCTGTCGAATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTC 2539 Query 155843 ACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATT 155902 ||| | ||| ||| || || || | | || || | ||| ||| |||| ||| Sbjct 2538 ACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAGGCTCCACATTTCATT 2479 Query 155903 ACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGC 155962 | ||||||| ||| || | ||| ||| | ||| ||||| | ||| | || Sbjct 2478 CGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACATGTCGCGGGC 2419 Query 155963 CTTTGACTCCTCATCGCC-GTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGAT 156021 ||| || | ||| ||| || ||| ||| || | || || | |||| || Sbjct 2418 ACGGACCTCTTCCTTGCCAGTG-TTTTTCTTTAGATCGAGAAACTCGAATACATCACCAT 2360 Query 156022 GGTGTGGCTCCAGATACATAGCAAAACTACCATTCC---TCTTGCCACCCTGATCTACAT 156078 | || |||||||| || || || ||| || | ||||| |||||||| || | Sbjct 2359 GCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTGTTGCCGCCCTGATCCACGT 2300 Query 156079 ACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGG 156138 |||| || || || ||| | || | ||||| || | | || || ||| | || || | Sbjct 2299 ACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAATACCGTTTG 2240 Query 156139 TTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTG 156198 | ||| || | | || | ||| | || | | || ||||| ||||| | Sbjct 2239 TGCCGGAGATGTATGTTCCCTTCGCGCGGATGCAGTGCACGTTCAGCCCAATGCCACCGG 2180 Query 156199 ACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCAT 156258 | | || ||||| | || |||| ||| | ||||| | ||||||| ||||| ||||| Sbjct 2179 CCGACTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATACCCTCAATGCTATCAT 2120 Query 156259 CTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATA 156318 | ||| | || ||| | || ||| | ||||| || | || | || || | Sbjct 2119 CAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTGCGTAGCCGCTGCAAACA 2060 Query 156319 GTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCT 156378 || |||| || || |||| || | ||||| || || || || | || Sbjct 2059 TGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAGACAGCAGATTATACGTTTCGAT-CGCT 2001 Query 156379 TC-TCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGC 156437 | || | || ||||| || | ||||| ||| | |||| ||||||||| || ||| Sbjct 2000 GCATCGATGTTTTCACCGTGGATGCCGATAGCGACGCGCATCAGCATATGCTGTGGTCGC 1941 Query 156438 TCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAA 156497 || ||||| || | || || | ||||| ||||||| |||||||| |||||| Sbjct 1940 TCAACAATTTTACCCTTTATCTTGAGCAAGTATGATCGTTCCAATGTTTTAAAGCCGAAA 1881 Query 156498 TA 156499 || Sbjct 1880 TA 1879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471244911632353