Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq18891 125 2e-23
seq25975 100 8e-16
>seq18891
Length=38368
Score = 125 bits (138), Expect = 2e-23
Identities = 173/242 (71%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634
|||||| || || |||||||||||||| ||||||||| | ||||| || || |||
Sbjct 25631 TCCATAGCTTTTATCAAACGACGCTGAATGTAACCAGTTTCGGCCGTTTTGACTGCAGTA 25690
Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694
||||| | ||| ||||||| |||||||| |||||| | | ||| ||| |||||
Sbjct 25691 TCAATCAAACCTTCACGACCTCCCATAGCGTGGAAGTAGAACTCGGTTGGTGTCAGCCCA 25750
Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAG 302754
||| | | || | || ||||||||||| | ||| || || ||| |||| | |||
Sbjct 25751 GCAAGATACGAATTTTCTACGAAACCACGAGACTCAGGACCATAATCGTCCTTGATGAAG 25810
Query 302755 TGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGT 302814
|||||||| || | || | ||| | || || ||||| || || |||||||||||
Sbjct 25811 TGTGGCAGTGTGCGTTTGCGGAATCCGAACGGTATGCGCTTACCCTCTACGTTCTGCTGC 25870
Query 302815 CC 302816
||
Sbjct 25871 CC 25872
>seq25975
Length=7706
Score = 100 bits (110), Expect = 8e-16
Identities = 606/962 (63%), Gaps = 21/962 (2%)
Strand=Plus/Minus
Query 155550 TCAAATGTTTTATCCTCATTTACAAACATACCAAGACCAATAGACGCCAGATTACATACC 155609
||| | |||||||| | ||||||||||| | | |||| || |||||||| || |||
Sbjct 2831 TCATACGTTTTATCTTGCTTTACAAACATGTTCAAAGCAATCGAGGCCAGATTGCACACC 2772
Query 155610 GCAG--TC-TCCTTGTCGTCGCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTG 155666
|| || ||||| || || || || ||||| || ||||||||| |||| ||
Sbjct 2771 GCTACTTCGTCCTT--CGACGAA-TACTCCACAATTTCGGTGCACAGGTTGGAACATTTA 2715
Query 155667 ATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTAT 155726
||||| || | ||||| ||| ||| ||||| || || ||||||||||| || ||||||
Sbjct 2714 ATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCATCCTTGTACAGCATGTAT 2655
Query 155727 GGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATT 155786
|| || || |||| ||| | || | ||| | ||| | ||| | || || |
Sbjct 2654 GGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCACAAGTCCTGTGCTTTGA-- 2597
Query 155787 TGCTTGTTGTAT----CTGCCTTCCGACTCATATTTCATATACAGCGTTCGGTAATCCTC 155842
| ||| | || | || || ||| || | | |||||| | | | || ||
Sbjct 2596 --CCTGTCGAATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTC 2539
Query 155843 ACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATT 155902
||| | ||| ||| || || || | | || || | ||| ||| |||| |||
Sbjct 2538 ACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAGGCTCCACATTTCATT 2479
Query 155903 ACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGC 155962
| ||||||| ||| || | ||| ||| | ||| ||||| | ||| | ||
Sbjct 2478 CGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACATGTCGCGGGC 2419
Query 155963 CTTTGACTCCTCATCGCC-GTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGAT 156021
||| || | ||| ||| || ||| ||| || | || || | |||| ||
Sbjct 2418 ACGGACCTCTTCCTTGCCAGTG-TTTTTCTTTAGATCGAGAAACTCGAATACATCACCAT 2360
Query 156022 GGTGTGGCTCCAGATACATAGCAAAACTACCATTCC---TCTTGCCACCCTGATCTACAT 156078
| || |||||||| || || || ||| || | ||||| |||||||| || |
Sbjct 2359 GCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTGTTGCCGCCCTGATCCACGT 2300
Query 156079 ACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGG 156138
|||| || || || ||| | || | ||||| || | | || || ||| | || || |
Sbjct 2299 ACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAATACCGTTTG 2240
Query 156139 TTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTG 156198
| ||| || | | || | ||| | || | | || ||||| ||||| |
Sbjct 2239 TGCCGGAGATGTATGTTCCCTTCGCGCGGATGCAGTGCACGTTCAGCCCAATGCCACCGG 2180
Query 156199 ACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCAT 156258
| | || ||||| | || |||| ||| | ||||| | ||||||| ||||| |||||
Sbjct 2179 CCGACTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATACCCTCAATGCTATCAT 2120
Query 156259 CTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATA 156318
| ||| | || ||| | || ||| | ||||| || | || | || || |
Sbjct 2119 CAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTGCGTAGCCGCTGCAAACA 2060
Query 156319 GTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCT 156378
|| |||| || || |||| || | ||||| || || || || | ||
Sbjct 2059 TGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAGACAGCAGATTATACGTTTCGAT-CGCT 2001
Query 156379 TC-TCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGC 156437
| || | || ||||| || | ||||| ||| | |||| ||||||||| || |||
Sbjct 2000 GCATCGATGTTTTCACCGTGGATGCCGATAGCGACGCGCATCAGCATATGCTGTGGTCGC 1941
Query 156438 TCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAA 156497
|| ||||| || | || || | ||||| ||||||| |||||||| ||||||
Sbjct 1940 TCAACAATTTTACCCTTTATCTTGAGCAAGTATGATCGTTCCAATGTTTTAAAGCCGAAA 1881
Query 156498 TA 156499
||
Sbjct 1880 TA 1879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471244911632353
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