Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq22281 127 2e-23 seq24253 105 8e-17 >seq22281 Length=11977 Score = 127 bits (140), Expect = 2e-23 Identities = 164/222 (74%), Gaps = 11/222 (5%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 ||||||||||| |||| ||||| |||| ||| || ||||| ||||| |||||| Sbjct 3081 CCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGTGAGTCCCGGCATCAGGCCACGCTTC 3140 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC-AAA 869298 |||||||| || |||| ||| ||||| ||| ||||| || ||||||||||| ||| Sbjct 3141 TTGAGCCAGAAAATGGAAGCGAAGCTGCCGCTGAAGAAGATACCTTCGACGGCGGCGAAA 3200 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTT---GATCCACTTCATCGC 869355 ||| | || ||||| | ||| | || ||| |||| | |||||| || | ||| Sbjct 3201 GCC-ACGACACGCTCACCGAAGTT----AG--CCTTCTTGCTGGAGATCCAGTTTAGCGC 3253 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGC 869397 |||||| ||||| ||| |||| |||||| ||| |||||||| Sbjct 3254 CCAGTCAGCCTTCTTCTTCACGCACGGCAGCGTTTCGATGGC 3295 >seq24253 Length=10800 Score = 105 bits (116), Expect = 8e-17 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 1592108 AAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCACC 1592167 ||||||||||| |||||| ||||||| || || | || || || ||| Sbjct 9462 AAGCGCACCGATGACATCAGCTCGTGGGATGCCGACTTCCTGAAGGTGGACCAAGGCACA 9403 Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 || || ||| ||||||| || || ||||| |||||||||||| ||||| || | Sbjct 9402 CTGTTCGAGCTGATCCTAGCGGCGAACTATCTCGACATCAAGGGCCTGCTAGACGTCACC 9343 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 ||||| | ||||| ||||||||||||||||| | || || ||||| || || || || Sbjct 9342 TGCAAAACGGTGGCAAACATGATCAAGGGCAAAACTCCGGAAGAGATTCGTAAAACGTTC 9283 Query 1592288 AACATCAAGTACG 1592300 ||||||||| ||| Sbjct 9282 AACATCAAGAACG 9270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6104646977641973