Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq22281 127 2e-23
seq24253 105 8e-17
>seq22281
Length=11977
Score = 127 bits (140), Expect = 2e-23
Identities = 164/222 (74%), Gaps = 11/222 (5%)
Strand=Plus/Plus
Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239
||||||||||| |||| ||||| |||| ||| || ||||| ||||| ||||||
Sbjct 3081 CCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGTGAGTCCCGGCATCAGGCCACGCTTC 3140
Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC-AAA 869298
|||||||| || |||| ||| ||||| ||| ||||| || ||||||||||| |||
Sbjct 3141 TTGAGCCAGAAAATGGAAGCGAAGCTGCCGCTGAAGAAGATACCTTCGACGGCGGCGAAA 3200
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTT---GATCCACTTCATCGC 869355
||| | || ||||| | ||| | || ||| |||| | |||||| || | |||
Sbjct 3201 GCC-ACGACACGCTCACCGAAGTT----AG--CCTTCTTGCTGGAGATCCAGTTTAGCGC 3253
Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGC 869397
|||||| ||||| ||| |||| |||||| ||| ||||||||
Sbjct 3254 CCAGTCAGCCTTCTTCTTCACGCACGGCAGCGTTTCGATGGC 3295
>seq24253
Length=10800
Score = 105 bits (116), Expect = 8e-17
Identities = 139/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 1592108 AAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCACC 1592167
||||||||||| |||||| ||||||| || || | || || || |||
Sbjct 9462 AAGCGCACCGATGACATCAGCTCGTGGGATGCCGACTTCCTGAAGGTGGACCAAGGCACA 9403
Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227
|| || ||| ||||||| || || ||||| |||||||||||| ||||| || |
Sbjct 9402 CTGTTCGAGCTGATCCTAGCGGCGAACTATCTCGACATCAAGGGCCTGCTAGACGTCACC 9343
Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287
||||| | ||||| ||||||||||||||||| | || || ||||| || || || ||
Sbjct 9342 TGCAAAACGGTGGCAAACATGATCAAGGGCAAAACTCCGGAAGAGATTCGTAAAACGTTC 9283
Query 1592288 AACATCAAGTACG 1592300
||||||||| |||
Sbjct 9282 AACATCAAGAACG 9270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6104646977641973
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |