Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq25975 417 7e-112 seq29242 134 1e-26 seq9735 122 8e-23 seq3879 122 8e-23 seq734 120 3e-22 seq24704 118 1e-21 >seq25975 Length=7706 Score = 417 bits (462), Expect = 7e-112 Identities = 1190/1797 (66%), Gaps = 63/1797 (4%) Strand=Plus/Minus Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212 ||| || || ||||||| || |||| |||| || || || | || ||||||||| || Sbjct 3708 TTTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTGCGCAAATAATACATGCC 3649 Query 138213 CGTTTTTAA-CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAG-TAACGCGTAAGTC 138270 ||||| || |||||||||| | |||| | || ||||| || || | || |||| | Sbjct 3648 AGTTTTCAAACCCATTTTCC-ACCCGTAGAAATGGATCGACGTCAGCTTAC-CGTAGTTG 3591 Query 138271 GGTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATG 138330 |||| ||| | || || |||||||| ||||||||| || || || ||||| Sbjct 3590 GGTTCCGCGACGTGAATATTGAACGATTGCGACTGATCGATAAACGCACCGCGATCCGCT 3531 Query 138331 GCCATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATA 138390 ||||| || || | |||| | |||||||| || || ||||| ||||| ||||| Sbjct 3530 GCCATTTTGATGCACGTTTTCACTGAGATCTCCCATACCGTTTTGTAAAGATCGCGAATT 3471 Query 138391 TGTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTC 138450 | | |||| || || |||| |||||||| || ||| || | || || || Sbjct 3470 TCTTGCGGGATAGTCTCAATCTTTTGAATTGATCCATTGTTCGACAGAATCTCGTTCTTC 3411 Query 138451 ATGTCATCGTTGTAC-AGATTC--AACTTGATCAAGTCGTTTATCAGATATCTGTTTATG 138507 || |||| | | | | || | ||| ||| || | | |||| ||||| Sbjct 3410 AT---ATCGAGATCCCATAATCCCATGTTGGTCAGATCCTGCAGGAGATGGTGGTTTACC 3354 Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 |||||||| ||||| | | || || | | ||| | ||| ||| | ||||| ||| Sbjct 3353 ACCTGAAACTCACCCGATAGCACGCGTCTATTGTATACGTTCGACGTGTAGGGCTCGAAC 3294 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 ||||| ||||| || ||||| || || || | || |||||||| |||| || || Sbjct 3293 GATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCATCGGGGCCAACAGCAGC 3234 Query 138628 GAATTCCGTAAACCGTGAAGCTTG---ATTCGTTCCTTGAGCGACGACCAGTCCCACAAA 138684 ||||| || | |||||| |||| ||| |||||| | | |||||||| ||||| Sbjct 3233 GAATTGCGGATACCGTG---CTTGGCTATTTTTTCCTTCAACTCCGACCAGTTCCACAGC 3177 Query 138685 TCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCT 138744 || | || | ||||||||||| |||||||| | || ||| ||| | ||||| || Sbjct 3176 TCAGTCGGCTCCTTGTTCCACATTTCGTACTGCAGGATGCCCTTACTCACCGGACTACCC 3117 Query 138745 TCGTACGAATCGTATACACCAAACTCTTGC-GCCAACTCGTTGCTCGCCTCGAGCGCACC 138803 ||||||| ||||| || | | | || |||||||| ||| || || || || || Sbjct 3116 TCGTACGTTTCGTACGGTCC-ATCACGAGCGGCCAACTCACAGCTAGCTTCCAGTGCTCC 3058 Query 138804 ATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGG 138863 | || || |||||| || || || || ||| | | ||||| |||| |||||||| Sbjct 3057 GAAATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTTGAGCCTCCTCGCTTTCGTACGG 2998 Query 138864 CATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATG 138923 ||| | | ||||||| ||||||| || || || || | |||| || || || Sbjct 2997 ATAGCGCATTAAGATGAACGCATCGGCCATTCCCTGAACACCTATACCGATGGGTCGGTG 2938 Query 138924 GCGCAGATTTGA-CGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGT 138982 ||||| || || ||| || || | || |||||| ||||| ||||| ||||| |||| Sbjct 2937 GCGCATGTTGGAGCGC-TTAGCCTCCGGGACAGGATAGTAGTTGACATCAATGATCTTGT 2879 Query 138983 TTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTGCCC 139041 | | ||| ||| || | ||||| || | | || | | | |||||| || || Sbjct 2878 TCAGATTGCGCGTTACTATCTTAG-CGACTTCCTTCAGCTTGGTAAAATCATACGT---- 2824 Query 139042 CCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACC 139101 || || | | ||||| |||| | | ||||||||| | ||||||||| Sbjct 2823 --TTTATCTT------GCTTTACAAACATGTTCAAAGCAATCGAGGCCAGATTGCACACC 2772 Query 139102 GCCACTTCGTCGGGGTCGCTG--TATTCGACAATTTCGGCACACAAATTACTACACTTGA 139159 || |||||||| ||| | || || |||||||||| |||| || ||| || | Sbjct 2771 GCTACTTCGTC--CTTCGACGAATACTCCACAATTTCGGTGCACAGGTTGGAACATTTAA 2714 Query 139160 TCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACG 139219 | || || | ||| || ||||| ||||| || || || ||||| ||||| ||||| || | Sbjct 2713 TGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCATCCTTGTACAGCATGTATG 2654 Query 139220 GTGTGCCAGTTTCCACTTGTGTCTCTATAAT---GAATTTGAACAAGTCCCTAGCTTGTA 139276 || ||| |||||||| || | ||| || || ||| |||||||| |||| | Sbjct 2653 GTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAA---CCACAAGTCCTGTGCTTTGA 2597 Query 139277 TTTGACGCACGTAAA--GTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTC 139334 || || | |||| | | || ||||||| ||| || | ||||| ||| Sbjct 2596 CCTGTCGAA--TAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTC 2539 Query 139335 ACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTT 139394 ||| | | || | ||| || |||| | || |||||||| || ||| | | || Sbjct 2538 ACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAGGCTCCACATTTCATT 2479 Query 139395 CGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGC 139454 ||||| || ||| |||||||||||||||| ||||||| |||| | | || ||||| || Sbjct 2478 CGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACATGTCGCGGGC 2419 Query 139455 CTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTG 139514 |||||| || |||| || | | || || || || || ||| | || Sbjct 2418 ACGGACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAACTCGAATACATCACCATG 2359 Query 139515 CCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGT---TTGCCACCTTGATCGACGTG 139571 ||| ||||||||||||||||| | ||| || || | ||||| || ||||| |||| Sbjct 2358 CCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTGTTGCCGCCCTGATCCACGTA 2299 Query 139572 TCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT 139631 ||| | | ||| ||| | ||||||| ||||||| ||| ||| | | | ||||| || Sbjct 2298 CCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAATACCGTTTGT 2239 Query 139632 GCTACGGATGGGACTGTTGC--GAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCG 139689 || |||| | |||| | || |||| | || || || | || || || ||| Sbjct 2238 GC--CGGAGATGTATGTTCCCTTCGCGCGGATGCAGTGCACGTTCAGCCCAATGCCACCG 2181 Query 139690 CCAAATTTGGATATTAAAACGCA-ATCGCGT-AATGTCTCGTATATACCTCTTATGCTGT 139747 | | || || || | |||| || || | | || ||||| ||||| ||||| | Sbjct 2180 GCCGACTTTGAAAT--CAGCGCACATTGCTTCAGAGTATCGTAAATACCCTCAATGCTAT 2123 Query 139748 CGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAA 139807 | || ||| || | |||||| || || || || || || | | ||| | ||||||| Sbjct 2122 CATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTGCGTAGCCGCTGCAA 2063 Query 139808 ACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGG 139867 ||| || || ||||| || || ||| |||| || | ||||||||||| Sbjct 2062 ACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAGACAGCAGATTATACGTTTCGAT-- 2005 Query 139868 CGCT-CA-CAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTG 139922 |||| || | || | |||||||| |||| || ||| |||||||||||||| || Sbjct 2004 CGCTGCATCGATGTTTTCACCGTGGATGCCGATAGCGACGCGCATCAGCATATGCTG 1948 >seq29242 Length=5648 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 |||||||| ||| | |||||||| ||||| || || || || ||||| || || |||| | Sbjct 5642 ATGCAGATTTTTGTGAAAACGCTGACCGGAAAGACCATCACTCTCGAGGTTGA-GCCATC 5584 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||| || | || | || || ||||| || || || || ||||| || || ||||| Sbjct 5583 CGATACGATTGAGAATGTCAAGGCCAAGATTCAGGATAAGGAGGGAATCCCACCAGATCA 5524 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||||||||| || |||||||| ||| | | | |||| || ||||| Sbjct 5523 GCAGCGTCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCGGACTATAA 5464 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||| |||||||| || || || |||| | || ||||||| || Sbjct 5463 CATTCAGAAGGAATCCACCCTCCATCTGGTTCTTCGTCTGCGCGGTGG 5416 >seq9735 Length=15595 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | |||||||| ||||| || || || || || || || || | | Sbjct 4610 ATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTCG 4669 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || ||||| || ||||| ||||| Sbjct 4670 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCAGATCAG 4729 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||||||||| || |||||||||||| | | | || || || || Sbjct 4730 CAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTACAAT 4789 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||||||||||| || || |||| ||||| | || || || Sbjct 4790 ATTCAGAAGGAATCGACCCTTCATCTGGTCCTGCGACTTCGTGGTGG 4836 >seq3879 Length=3897 Score = 122 bits (134), Expect = 8e-23 Identities = 154/209 (74%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA- 24761 |||||||||||| | |||||||| || || || || || || | || || | ||||| Sbjct 3690 GATGCAGATCTTCGTGAAAACGCTGACTGGCAAGACCATCACTTTGGAGGTCG-AGCCAT 3748 Query 24762 CCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 | ||||| | || | || || |||||||| ||||| || || || ||||| |||| Sbjct 3749 CGGACACGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGATC 3808 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || ||||||||||| ||||| || |||||||||||| | | |||| ||||| | Sbjct 3809 AGCAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAGGATGGACGTACTTTGTCCGATTACA 3868 Query 24882 ACATTCAAAAGGAATCGACACTACACTTG 24910 |||| || ||||| ||||| | |||||| Sbjct 3869 ACATCCAGAAGGAGTCGACCTTGCACTTG 3897 >seq734 Length=4884 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 |||||||| ||| | ||||| || ||||| || || || || ||||| || || |||| | Sbjct 237 ATGCAGATTTTTGTGAAAACTCTGACCGGAAAGACCATCACCCTCGAGGTTGA-GCCATC 179 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||| || | || | || || ||||| || || || || ||||| || || ||||| Sbjct 178 CGATACGATTGAGAATGTCAAGGCCAAGATTCAGGATAAGGAGGGAATCCCACCAGATCA 119 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||||||||| || |||||||| ||| | | | |||| || ||||| Sbjct 118 GCAGCGTCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCGGACTATAA 59 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || |||||||| || || || |||| | || |||| || || Sbjct 58 CATCCAGAAGGAATCCACCCTCCATCTGGTCCTTCGTCTGCGTGGTGG 11 >seq24704 Length=53625 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| || || ||||| || ||||| || || || || || | Sbjct 37476 GATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTC 37535 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || |||||||| ||||| || ||||| || || ||||| Sbjct 37536 GGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCGGATCA 37595 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| ||||| || |||||||||||| | | |||| || || || Sbjct 37596 GCAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGATGGACGCACGCTGTCCGACTACAA 37655 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| || || || || || || || ||||| | || ||||||| || Sbjct 37656 CATCCAGAAAGAGTCTACCCTTCATCTGGTGCTTCGTCTGCGCGGTGG 37703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449726813247320