Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq25429 154 1e-32 >seq25429 Length=8147 Score = 154 bits (170), Expect = 1e-32 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCA 34503 |||||||| || || || ||||| || |||||||| ||||| || |||| ||||| || Sbjct 5847 TGCGTTTGAGCTCCAAGTTCGCAGCCAAAGTACTTGGTCGGATAGGTGGCAGGACGACCG 5906 Query 34504 AGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCT 34563 | ||| ||| | ||| | |||||| ||||| || |||||||||||||| ||||| || Sbjct 5907 ATCGCACGGGCCACTTCTGCCATGTTCACGATCACTGTCTTGATGCCGTTTCCCTTACCC 5966 Query 34564 TCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGG 34623 || ||||| || |||||| ||||| ||||| |||||||| ||| | |||||||| Sbjct 5967 TCTACCTTTGCATTGATGCGGGGCATCTTGTAACGGTAGAAGATGTCGGTAACATTGCGA 6026 Query 34624 TTAACGTTCACAGTCCCCAT 34643 || |||||||| || |||| Sbjct 6027 TTCACGTTCACGGTAGCCAT 6046 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263 || || ||||| | ||||| ||||| | |||||| | | |||| || || | Sbjct 5527 GGTGGATTTTTGATGATGAACGTGTTCACCTTATGGTTCACCTCGAGCGGACCATGGAAT 5586 Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTC 34323 ||||| || ||||| ||||| ||||| | ||| || | |||||||| || || ||| Sbjct 5587 CCGCACGCCTTGCAACCCTGCGAGATAGTACCCTTCTTGGACGACACGATCAGATCCGTC 5646 Query 34324 TCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCC 34383 |||||||||||||| ||||| |||| ||| || | |||||||| ||||| ||||||||| Sbjct 5647 TCCGGGTTGTCACACTCCGGGCACAGCACGTACCTACGGATGAAGCCATCGAGCAGGTCC 5706 Query 34384 TGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 || | ||| | | ||||| || || || || ||||| |||||||| Sbjct 5707 TGCAGCTTGGCCGCATCGTGCGATCCATTCACAATGAAGCGTTCGTT 5753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412688798163917