Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq22281 118 2e-20 seq24253 105 1e-16 >seq22281 Length=11977 Score = 118 bits (130), Expect = 2e-20 Identities = 162/221 (73%), Gaps = 9/221 (4%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||||||||| |||| ||||| ||| ||| || ||||| ||||| |||||| Sbjct 3081 CCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGTGAGTCCCGGCATCAGGCCACGCTTC 3140 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC-AAA 794459 |||||||| || |||| | ||| ||||| ||| ||||| || ||||||||||| ||| Sbjct 3141 TTGAGCCAGAAAATGGAAGCGAAGCTGCCGCTGAAGAAGATACCTTCGACGGCGGCGAAA 3200 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTT--TGTTGATCCACTTCATCGCC 794517 ||| |||| ||||| | |||| ||| |||| || |||||| || | |||| Sbjct 3201 GCC-ACGACACGCTC-ACCGAAGT----TAGCCTTCTTGCTGGAGATCCAGTTTAGCGCC 3254 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGC 794558 || || ||||| ||| |||| | |||| ||| |||||||| Sbjct 3255 CAGTCAGCCTTCTTCTTCACGCACGGCAGCGTTTCGATGGC 3295 >seq24253 Length=10800 Score = 105 bits (116), Expect = 1e-16 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625 || ||||||||||| ||||| ||||||| | ||| |||| |||||| | Sbjct 9465 GAAAAGCGCACCGATGACATCAGCTCGTGGGATGCCGACTTCCTGAAGGTGGACCAAGGC 9406 Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685 || || || ||| ||||||| || || ||||| |||||||||||| ||| || || | Sbjct 9405 ACACTGTTCGAGCTGATCCTAGCGGCGAACTATCTCGACATCAAGGGCCTGCTAGACGTC 9346 Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745 ||||| || ||||| ||| | ||||||||||| | || || || || || || || Sbjct 9345 ACCTGCAAAACGGTGGCAAACATGATCAAGGGCAAAACTCCGGAAGAGATTCGTAAAACG 9286 Query 2035746 TTTAACATCAAGTACG 2035761 || ||||||||| ||| Sbjct 9285 TTCAACATCAAGAACG 9270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7913015910956991