Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq22281 118 2e-20
seq24253 105 1e-16
>seq22281
Length=11977
Score = 118 bits (130), Expect = 2e-20
Identities = 162/221 (73%), Gaps = 9/221 (4%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
||||||||||| |||| ||||| ||| ||| || ||||| ||||| ||||||
Sbjct 3081 CCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGTGAGTCCCGGCATCAGGCCACGCTTC 3140
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC-AAA 794459
|||||||| || |||| | ||| ||||| ||| ||||| || ||||||||||| |||
Sbjct 3141 TTGAGCCAGAAAATGGAAGCGAAGCTGCCGCTGAAGAAGATACCTTCGACGGCGGCGAAA 3200
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTT--TGTTGATCCACTTCATCGCC 794517
||| |||| ||||| | |||| ||| |||| || |||||| || | ||||
Sbjct 3201 GCC-ACGACACGCTC-ACCGAAGT----TAGCCTTCTTGCTGGAGATCCAGTTTAGCGCC 3254
Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGC 794558
|| || ||||| ||| |||| | |||| ||| ||||||||
Sbjct 3255 CAGTCAGCCTTCTTCTTCACGCACGGCAGCGTTTCGATGGC 3295
>seq24253
Length=10800
Score = 105 bits (116), Expect = 1e-16
Identities = 141/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625
|| ||||||||||| ||||| ||||||| | ||| |||| |||||| |
Sbjct 9465 GAAAAGCGCACCGATGACATCAGCTCGTGGGATGCCGACTTCCTGAAGGTGGACCAAGGC 9406
Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685
|| || || ||| ||||||| || || ||||| |||||||||||| ||| || || |
Sbjct 9405 ACACTGTTCGAGCTGATCCTAGCGGCGAACTATCTCGACATCAAGGGCCTGCTAGACGTC 9346
Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745
||||| || ||||| ||| | ||||||||||| | || || || || || || ||
Sbjct 9345 ACCTGCAAAACGGTGGCAAACATGATCAAGGGCAAAACTCCGGAAGAGATTCGTAAAACG 9286
Query 2035746 TTTAACATCAAGTACG 2035761
|| ||||||||| |||
Sbjct 9285 TTCAACATCAAGAACG 9270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7913015910956991
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |