Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq24704 141 6e-29
seq734 138 7e-28
seq29242 132 3e-26
seq9735 114 8e-21
seq3879 95.1 8e-15
>seq24704
Length=53625
Score = 141 bits (156), Expect = 6e-29
Identities = 161/214 (75%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| ||||| |||| ||| ||| ||||| ||||| ||||| || || |||| ||||
Sbjct 37688 AGCACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCATCC 37629
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||| |||||||||||||| || ||||| || |||| | |||||||||||
Sbjct 37628 TCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATTCCCTCCTTGTCC 37569
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || || || || || |||| || || |||||| |||| ||| ||||
Sbjct 37568 TGGATCTTCGCCTTCAC--ATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGG 37511
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| ||||||||||| || || |||||||||||
Sbjct 37510 TCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 37477
>seq734
Length=4884
Score = 138 bits (152), Expect = 7e-28
Identities = 160/214 (75%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|||||||| || | |||| |||||||| |||||||||||||| ||| |||| ||||
Sbjct 26 AGGACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCT 85
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||||||||| |||||||| || ||||| ||| | || | |||||||| ||
Sbjct 86 TCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCC 145
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || ||||| || || |||| || | ||| || || | ||| ||||
Sbjct 146 TGAATCTTGGCCTTGAC--ATTCTCAATCGTATCGGATGGCTCAACCTCGAGGGTGATGG 203
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||||| || || || || ||||| ||||||||
Sbjct 204 TCTTTCCGGTCAGAGTTTTCACAAAAATCTGCAT 237
>seq29242
Length=5648
Score = 132 bits (146), Expect = 3e-26
Identities = 159/214 (74%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| ||||| || | |||| ||||||||||||||||||||||| ||| |||| ||||
Sbjct 5431 AGAACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGACAGGGTGCGGCCATCT 5490
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||||||||| |||||||| || ||||| ||| | || | |||||||| ||
Sbjct 5491 TCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCC 5550
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || ||||| || || |||| || | ||| || || | || ||||
Sbjct 5551 TGAATCTTGGCCTTGAC--ATTCTCAATCGTATCGGATGGCTCAACCTCGAGAGTGATGG 5608
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||||| || || || || ||||| ||||||||
Sbjct 5609 TCTTTCCGGTCAGCGTTTTCACAAAAATCTGCAT 5642
>seq9735
Length=15595
Score = 114 bits (126), Expect = 8e-21
Identities = 156/216 (72%), Gaps = 4/216 (2%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||||||||| |||| ||| ||||||||||| || ||||| || || |||| ||||
Sbjct 4822 CAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGACCATC 4763
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| ||||| ||||| |||||||| || ||||| ||| | || | || ||||| ||
Sbjct 4762 CTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTATC 4703
Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
| || || || || || || |||| || | |||||| |||| || |||
Sbjct 4702 CTGGATCTTGGCCTTCAC--ATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 4645
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||| || ||||| || || || || |||||||||
Sbjct 4644 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATG 4609
>seq3879
Length=3897
Score = 95.1 bits (104), Expect = 8e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| || || || | | || |||| ||||| ||||| ||||||||
Sbjct 3882 CTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAGCTGCTTACCGGCGAA 3823
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| || ||||| ||| | || | ||||||||||| | || || || |||
Sbjct 3822 GATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 3763
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| || | |||||| || | || |||||||| || || || || || ||
Sbjct 3762 CTCGATCGTGTCCGATGGCTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGCGTTTTCAC 3703
Query 34966 AAAGATCTGCAT 34977
|||||||||||
Sbjct 3702 GAAGATCTGCAT 3691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325572253868411
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |