Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 379 2e-100
seq9735 134 1e-26
seq24704 123 2e-23
seq734 120 3e-22
seq22281 116 4e-21
seq29242 111 2e-19
>seq25975
Length=7706
Score = 379 bits (420), Expect = 2e-100
Identities = 1007/1525 (66%), Gaps = 40/1525 (3%)
Strand=Plus/Minus
Query 148251 AGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTC 148310
|||| || || |||||||||||||| || | |||||||| | || ||||| |
Sbjct 3368 AGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTATTGTATACGTTCGAC 3309
Query 148311 GTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATG 148370
|| | || || ||||| || |||||||| | ||| || || |||| ||||| |||||
Sbjct 3308 GTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCATC 3249
Query 148371 TACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCC 148430
|| | ||||||||| ||||| | |||| | || |||||| ||||| ||| |
Sbjct 3248 GGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCCTTCAACTCCGAC 3189
Query 148431 CAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTA 148490
|||| ||| ||| | ||| | ||||||||| ||||||||||| ||||| ||
Sbjct 3188 CAGTTCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCAGGATGCCCTTACTC 3129
Query 148491 GCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCC 148550
| || || |||||||||| ||||||||| | || |||| || ||||| ||
Sbjct 3128 ACCGGACTACCCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTCACAGCTAGCT 3069
Query 148551 TCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCG 148610
|| || || ||| | || || || ||| ||||| ||| ||| ||| ||||
Sbjct 3068 TCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTTGAGCCTCCTCG 3009
Query 148611 CTTTCGTACGGCATA-CGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCC 148669
||||||||||| ||| |||| | ||||| ||||| | ||||| || || | ||
Sbjct 3008 CTTTCGTACGG-ATAGCGCATTAAGATGAACGCATCGGCCATTCCCTGAACACCTATACC 2950
Query 148670 AATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGATAGTGGTTGCGGTC 148729
||||| ||||| ||||||||| | || | || ||||||| |||| ||
Sbjct 2949 GATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACAGGATAGTAGTTGACATC 2890
Query 148730 GATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATC 148789
|||||||||| ||||||||| || | ||| | | | |||| ||||||
Sbjct 2889 AATGATCTTGTTCAGATTGCGCGTTACTATCTTAGCGACTTCCTTCAGCTTGGTAAAATC 2830
Query 148790 GTACTTGTCATC------TACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACAC 148843
||| | | ||| ||| | ||| ||||| || || ||||| |||||||||||
Sbjct 2829 ATACGTTTTATCTTGCTTTAC-AAACAT--GTTCAAAGCAATCGAGGCCAGATTGCACAC 2773
Query 148844 GGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGAT 148903
|| || ||| | ||||| || || |||| |||||| ||| ||||| ||
Sbjct 2772 CGCTACTTCGTCCTTCGACGAATACTCCACAATTTCGGTGCACAGGTTGGAACATTTAAT 2713
Query 148904 CACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963
|| || |||| ||||| || || | ||||| || ||||||||||||||||| ||
Sbjct 2712 GGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCATCCTTGTACAGCATGTATGG 2653
Query 148964 TCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGATGCAGGTCCTGCGCGCGCAC 149020
| |||| ||||||||||||| || | || ||||| || |||||| || ||
Sbjct 2652 TACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACC---ACAAGTCCTGTGCTTTGAC 2596
Query 149021 TTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCC 149080
|| | |||||||||| | |||||| || |||||| ||||||| | || ||
Sbjct 2595 CTGTCGAATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCACC 2536
Query 149081 GTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGC 149140
| ||| | |||||||| || | ||| || ||||| || ||||| | | |||
Sbjct 2535 CCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAGGCTCCACATTTCATTCGC 2476
Query 149141 GTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTT 149200
| ||| |||||||| |||||||| || | ||| || ||||| | | |||||| ||
Sbjct 2475 CTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACATGTCGCGGGCACG 2416
Query 149201 GCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCA 149260
| ||||| ||| |||| || | ||| | ||||| || | |||||
Sbjct 2415 GACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAACTCGAATACATCACCATGCCA 2356
Query 149261 CGGCTCAATGTACACCGCGAGCGC----GCCCTTGCGCTTGCCGCCCTGGTCGACGTGGC 149316
||| || | || | |||| || | |||| | ||||||||||| || |||| |
Sbjct 2355 CGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTG-TTGCCGCCCTGATCCACGTACC 2297
Query 149317 GCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGT-- 149374
| || | ||||| |||| || | ||| || | | || | | | | ||||| ||
Sbjct 2296 GTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAATACCGTTTGTGC 2237
Query 149375 -AGAGCT-AATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCG 149432
||| | ||| | |||||| ||| ||||||||| | || ||||| |||
Sbjct 2236 CGGAGATGTATGTTCCCTTCGCGCGGATGCA----GTGCACGTTCAGCCCAATGCCACCG 2181
Query 149433 CCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCG 149492
| ||||||| || ||| || | || || ||| || ||||| ||||| ||
Sbjct 2180 GCCGACTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATACCCTCAATGCTATCA 2121
Query 149493 CGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAAC 149552
||||||||||||||| || || | | || || |||| | || || |||
Sbjct 2120 TCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTGCGTAGCCGCTGCAAAC 2061
Query 149553 ATGGTGGGGCTGGCGTGTGTAAAATA--TTTCTGGCTCATCATCTCGTACGACTCGAGCA 149610
||||| || |||||| ||||| || ||| | || || | |||| |||| |
Sbjct 2060 ATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAG--ACAGCAGATTATACGTTTCGATCG 2003
Query 149611 CGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTC 149670
| || |||| || || |||||||| || ||||||||||||||||||||||| ||||
Sbjct 2002 CTGCATCGATGTTTTCACCGTGGATGCCGATAGCGACGCGCATCAGCATATGCTGTGGTC 1943
Query 149671 GCTCCGCCACTTT---GTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGC 149727
|||| | | ||| ||| || ||||||||||| ||| | ||| || |||
Sbjct 1942 GCTCAACAATTTTACCCTTT---ATCTTGAGCAAGTATGATCGTTCCAATGTTTTAAAGC 1886
Query 149728 CAAAGTACTTGTAGTCAAAGTCGCG 149752
| || || ||||| ||||||||||
Sbjct 1885 CGAAATAGTTGTACCCAAAGTCGCG 1861
>seq9735
Length=15595
Score = 134 bits (148), Expect = 1e-26
Identities = 155/206 (75%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| || || ||||| |||||||| ||| | ||| ||| | ||||| ||||
Sbjct 4813 ATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGACCA-TCCTCCAGCT 4755
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
||||||| || | || || |||||||| || ||||| ||||||||||| || |||||
Sbjct 4754 GCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTATCCTGGATCT 4695
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | ||| | |||||| | ||||| || || | |||| ||| |||||||
Sbjct 4694 TGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGG 4635
Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661
| || ||||| |||||||||||||||
Sbjct 4634 TGAGCGTTTTCACGAAAATCTGCATG 4609
>seq24704
Length=53625
Score = 123 bits (136), Expect = 2e-23
Identities = 152/205 (74%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||||||||| || ||||| ||| || |||| | | | ||||| ||||
Sbjct 37680 ATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCA-TCCTCCAGCT 37622
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
|||| || ||| | || || |||||||| || || ||||| || |||||||| |||||
Sbjct 37621 GCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATTCCCTCCTTGTCCTGGATCT 37562
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | ||| | ||| || | |||||| || || | ||| | ||| || || |
Sbjct 37561 TCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTACCCG 37502
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
| || ||||| ||||| ||||||||
Sbjct 37501 TGAGGGTTTTGACGAAGATCTGCAT 37477
>seq734
Length=4884
Score = 120 bits (132), Expect = 3e-22
Identities = 151/205 (74%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | |||||| || ||||| || || || || || ||| | | | || || ||||
Sbjct 34 ATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCA-TCTTCCAGCT 92
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
|||| || || | || || |||||||| || || ||||| || ||||| || ||||
Sbjct 93 GCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGAATCT 152
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||||| | ||||| ||| |||| ||||| || |||| ||||| ||| || ||||
Sbjct 153 TGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGGGTGATGGTCTTTCCGG 212
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
|||||||||| || |||||||||||
Sbjct 213 TCAGAGTTTTCACAAAAATCTGCAT 237
>seq22281
Length=11977
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698
|||||| || ||||| |||||| || ||||||||||| ||||||||||| || ||
Sbjct 3056 CAGGCAGGCGAAGTCGCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGT 3115
Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758
|| || ||||| | ||| | |||||| |||| |||| || |||||||| ||
Sbjct 3116 GAGTCCCGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTGCCGCTGAA 3175
Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT 120818
||| | || || ||| ||| || || || | ||||| | || | ||| |||||||
Sbjct 3176 GAAGATACCTTCGACGGCGGCGAAAGCCACGACACGCTCACCGAAGTTAGCCTTCTTGCT 3235
Query 120819 GTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCA 120865
| |||||| || | ||||| || ||||| || |||||||||||
Sbjct 3236 GGAGATCCAGTTTAGCGCCCAGTCAGCCTTCTTCTTCACGCACGGCA 3282
>seq29242
Length=5648
Score = 111 bits (122), Expect = 2e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | |||||| || ||||| || || || || || ||| | | | || || ||||
Sbjct 5439 ATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGACAGGGTGCGGCCA-TCTTCCAGCT 5497
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
|||| || || | || || |||||||| || || ||||| || ||||| || ||||
Sbjct 5498 GCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGAATCT 5557
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||||| | ||||| ||| |||| ||||| || |||| |||| ||| || ||||
Sbjct 5558 TGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGAGTGATGGTCTTTCCGG 5617
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
|||| ||||| || |||||||||||
Sbjct 5618 TCAGCGTTTTCACAAAAATCTGCAT 5642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483237287421560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |