Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq25975 379 2e-100 seq9735 134 1e-26 seq24704 123 2e-23 seq734 120 3e-22 seq22281 116 4e-21 seq29242 111 2e-19 >seq25975 Length=7706 Score = 379 bits (420), Expect = 2e-100 Identities = 1007/1525 (66%), Gaps = 40/1525 (3%) Strand=Plus/Minus Query 148251 AGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTC 148310 |||| || || |||||||||||||| || | |||||||| | || ||||| | Sbjct 3368 AGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTATTGTATACGTTCGAC 3309 Query 148311 GTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATG 148370 || | || || ||||| || |||||||| | ||| || || |||| ||||| ||||| Sbjct 3308 GTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCATC 3249 Query 148371 TACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCC 148430 || | ||||||||| ||||| | |||| | || |||||| ||||| ||| | Sbjct 3248 GGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCCTTCAACTCCGAC 3189 Query 148431 CAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTA 148490 |||| ||| ||| | ||| | ||||||||| ||||||||||| ||||| || Sbjct 3188 CAGTTCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCAGGATGCCCTTACTC 3129 Query 148491 GCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCC 148550 | || || |||||||||| ||||||||| | || |||| || ||||| || Sbjct 3128 ACCGGACTACCCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTCACAGCTAGCT 3069 Query 148551 TCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCG 148610 || || || ||| | || || || ||| ||||| ||| ||| ||| |||| Sbjct 3068 TCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTTGAGCCTCCTCG 3009 Query 148611 CTTTCGTACGGCATA-CGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCC 148669 ||||||||||| ||| |||| | ||||| ||||| | ||||| || || | || Sbjct 3008 CTTTCGTACGG-ATAGCGCATTAAGATGAACGCATCGGCCATTCCCTGAACACCTATACC 2950 Query 148670 AATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGATAGTGGTTGCGGTC 148729 ||||| ||||| ||||||||| | || | || ||||||| |||| || Sbjct 2949 GATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACAGGATAGTAGTTGACATC 2890 Query 148730 GATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATC 148789 |||||||||| ||||||||| || | ||| | | | |||| |||||| Sbjct 2889 AATGATCTTGTTCAGATTGCGCGTTACTATCTTAGCGACTTCCTTCAGCTTGGTAAAATC 2830 Query 148790 GTACTTGTCATC------TACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACAC 148843 ||| | | ||| ||| | ||| ||||| || || ||||| ||||||||||| Sbjct 2829 ATACGTTTTATCTTGCTTTAC-AAACAT--GTTCAAAGCAATCGAGGCCAGATTGCACAC 2773 Query 148844 GGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGAT 148903 || || ||| | ||||| || || |||| |||||| ||| ||||| || Sbjct 2772 CGCTACTTCGTCCTTCGACGAATACTCCACAATTTCGGTGCACAGGTTGGAACATTTAAT 2713 Query 148904 CACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963 || || |||| ||||| || || | ||||| || ||||||||||||||||| || Sbjct 2712 GGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCATCCTTGTACAGCATGTATGG 2653 Query 148964 TCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGATGCAGGTCCTGCGCGCGCAC 149020 | |||| ||||||||||||| || | || ||||| || |||||| || || Sbjct 2652 TACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACC---ACAAGTCCTGTGCTTTGAC 2596 Query 149021 TTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCC 149080 || | |||||||||| | |||||| || |||||| ||||||| | || || Sbjct 2595 CTGTCGAATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCACC 2536 Query 149081 GTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGC 149140 | ||| | |||||||| || | ||| || ||||| || ||||| | | ||| Sbjct 2535 CCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAGGCTCCACATTTCATTCGC 2476 Query 149141 GTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTT 149200 | ||| |||||||| |||||||| || | ||| || ||||| | | |||||| || Sbjct 2475 CTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACATGTCGCGGGCACG 2416 Query 149201 GCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCA 149260 | ||||| ||| |||| || | ||| | ||||| || | ||||| Sbjct 2415 GACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAACTCGAATACATCACCATGCCA 2356 Query 149261 CGGCTCAATGTACACCGCGAGCGC----GCCCTTGCGCTTGCCGCCCTGGTCGACGTGGC 149316 ||| || | || | |||| || | |||| | ||||||||||| || |||| | Sbjct 2355 CGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTG-TTGCCGCCCTGATCCACGTACC 2297 Query 149317 GCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGT-- 149374 | || | ||||| |||| || | ||| || | | || | | | | ||||| || Sbjct 2296 GTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAATACCGTTTGTGC 2237 Query 149375 -AGAGCT-AATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCG 149432 ||| | ||| | |||||| ||| ||||||||| | || ||||| ||| Sbjct 2236 CGGAGATGTATGTTCCCTTCGCGCGGATGCA----GTGCACGTTCAGCCCAATGCCACCG 2181 Query 149433 CCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCG 149492 | ||||||| || ||| || | || || ||| || ||||| ||||| || Sbjct 2180 GCCGACTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATACCCTCAATGCTATCA 2121 Query 149493 CGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAAC 149552 ||||||||||||||| || || | | || || |||| | || || ||| Sbjct 2120 TCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTGCGTAGCCGCTGCAAAC 2061 Query 149553 ATGGTGGGGCTGGCGTGTGTAAAATA--TTTCTGGCTCATCATCTCGTACGACTCGAGCA 149610 ||||| || |||||| ||||| || ||| | || || | |||| |||| | Sbjct 2060 ATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAG--ACAGCAGATTATACGTTTCGATCG 2003 Query 149611 CGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTC 149670 | || |||| || || |||||||| || ||||||||||||||||||||||| |||| Sbjct 2002 CTGCATCGATGTTTTCACCGTGGATGCCGATAGCGACGCGCATCAGCATATGCTGTGGTC 1943 Query 149671 GCTCCGCCACTTT---GTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGC 149727 |||| | | ||| ||| || ||||||||||| ||| | ||| || ||| Sbjct 1942 GCTCAACAATTTTACCCTTT---ATCTTGAGCAAGTATGATCGTTCCAATGTTTTAAAGC 1886 Query 149728 CAAAGTACTTGTAGTCAAAGTCGCG 149752 | || || ||||| |||||||||| Sbjct 1885 CGAAATAGTTGTACCCAAAGTCGCG 1861 >seq9735 Length=15595 Score = 134 bits (148), Expect = 1e-26 Identities = 155/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| || || ||||| |||||||| ||| | ||| ||| | ||||| |||| Sbjct 4813 ATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGACCA-TCCTCCAGCT 4755 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | || || |||||||| || ||||| ||||||||||| || ||||| Sbjct 4754 GCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTATCCTGGATCT 4695 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||| | |||||| | ||||| || || | |||| ||| ||||||| Sbjct 4694 TGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATGGTCTTGCCGG 4635 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 | || ||||| ||||||||||||||| Sbjct 4634 TGAGCGTTTTCACGAAAATCTGCATG 4609 >seq24704 Length=53625 Score = 123 bits (136), Expect = 2e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||||||||| || ||||| ||| || |||| | | | ||||| |||| Sbjct 37680 ATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCA-TCCTCCAGCT 37622 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || ||| | || || |||||||| || || ||||| || |||||||| ||||| Sbjct 37621 GCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATTCCCTCCTTGTCCTGGATCT 37562 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||| | ||| || | |||||| || || | ||| | ||| || || | Sbjct 37561 TCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTACCCG 37502 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | || ||||| ||||| |||||||| Sbjct 37501 TGAGGGTTTTGACGAAGATCTGCAT 37477 >seq734 Length=4884 Score = 120 bits (132), Expect = 3e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| || ||||| || || || || || ||| | | | || || |||| Sbjct 34 ATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCA-TCTTCCAGCT 92 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || | || || |||||||| || || ||||| || ||||| || |||| Sbjct 93 GCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGAATCT 152 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | ||||| ||| |||| ||||| || |||| ||||| ||| || |||| Sbjct 153 TGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGGGTGATGGTCTTTCCGG 212 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 |||||||||| || ||||||||||| Sbjct 213 TCAGAGTTTTCACAAAAATCTGCAT 237 >seq22281 Length=11977 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698 |||||| || ||||| |||||| || ||||||||||| ||||||||||| || || Sbjct 3056 CAGGCAGGCGAAGTCGCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGT 3115 Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758 || || ||||| | ||| | |||||| |||| |||| || |||||||| || Sbjct 3116 GAGTCCCGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTGCCGCTGAA 3175 Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT 120818 ||| | || || ||| ||| || || || | ||||| | || | ||| ||||||| Sbjct 3176 GAAGATACCTTCGACGGCGGCGAAAGCCACGACACGCTCACCGAAGTTAGCCTTCTTGCT 3235 Query 120819 GTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCA 120865 | |||||| || | ||||| || ||||| || ||||||||||| Sbjct 3236 GGAGATCCAGTTTAGCGCCCAGTCAGCCTTCTTCTTCACGCACGGCA 3282 >seq29242 Length=5648 Score = 111 bits (122), Expect = 2e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| || ||||| || || || || || ||| | | | || || |||| Sbjct 5439 ATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGACAGGGTGCGGCCA-TCTTCCAGCT 5497 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || | || || |||||||| || || ||||| || ||||| || |||| Sbjct 5498 GCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGAATCT 5557 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | ||||| ||| |||| ||||| || |||| |||| ||| || |||| Sbjct 5558 TGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGAGTGATGGTCTTTCCGG 5617 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||||| || ||||||||||| Sbjct 5618 TCAGCGTTTTCACAAAAATCTGCAT 5642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483237287421560