Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq3879 104 6e-17
seq24704 102 2e-16
seq9735 87.8 4e-12
>seq3879
Length=3897
Score = 104 bits (114), Expect = 6e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|||||||| || || || || ||||||||||| || || || ||||| ||||
Sbjct 3706 AAAACGCTGACTGGCAAGACCATCACTTTGGAGGTCGAGCCATCGGACACGATCGAGAAC 3765
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || ||| || || || | | ||||||
Sbjct 3766 GTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAGCAGCGTTTGATCTTC 3825
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| |||| |||||| | |||||| ||||||||||| ||||||| |||||
Sbjct 3826 GCCGGTAAGCAGCTGGAGGATGGACGTACTTTGTCCGATTACAACATCCAGAAGGAGTCG 3885
Query 206365 AC 206366
||
Sbjct 3886 AC 3887
>seq24704
Length=53625
Score = 102 bits (112), Expect = 2e-16
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || |||||| ||||| || || || || || | || || || || ||
Sbjct 37480 CAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTCGGAT 37539
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || || ||||| |||||| ||
Sbjct 37540 ACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCGGATCAGCAG 37599
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||||||||| |||||| |||| |||||| | || || |||| |||||| ||
Sbjct 37600 CGTCTGATCTTCGCCGGTAAGCAGCTGGAGGATGGACGCACGCTGTCCGACTACAACATC 37659
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
|||||||||||||| ||||| || ||
Sbjct 37660 CAGAAAGAGTCTACCCTTCATCTGGT 37685
Score = 87.8 bits (96), Expect = 4e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823
|| || ||||| |||||||||||||||| || ||||| | || || | |||||| |||
Sbjct 37685 ACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCATCCTCC 37626
Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856
|||||||| ||||||||||| || || || |||
Sbjct 37625 AGCTGCTTACCGGCGAAGATCAGACGCTGCTGA 37593
>seq9735
Length=15595
Score = 87.8 bits (96), Expect = 4e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||||||||| || || || ||||| | || || || ||| ||||| ||||
Sbjct 4625 AAAACGCTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTCGGACACGATCGAGAAT 4684
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || ||||| ||| || || || | || |||||
Sbjct 4685 GTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCAGATCAGCAGCGTCTGATCTTT 4744
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| |||| ||||| | ||| | |||| ||||| | ||||| || ||
Sbjct 4745 GCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTACAATATTCAGAAGGAATCG 4804
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|| ||||| || || || |||||||
Sbjct 4805 ACCCTTCATCTGGTCCTGCGACTTCG 4830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181360950202849
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |