Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 383 2e-101
seq29242 105 6e-18
seq734 104 2e-17
seq9735 96.9 3e-15
seq24704 89.7 5e-13
seq3879 89.7 5e-13
>seq25975
Length=7706
Score = 383 bits (424), Expect = 2e-101
Identities = 1212/1852 (65%), Gaps = 56/1852 (3%)
Strand=Plus/Minus
Query 146575 GCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCGCCACGAGTGATTG 146634
|| || || |||||||||||||||||||| ||||| | || | |||| ||
Sbjct 3677 GCCGGCTTGGTGCGCAAATAATACATGCCAGTTTTCAAACCCATTTTCCACCCGTAGAAA 3618
Query 146635 TGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGGCTT 146694
|| ||||| |||| | |||| | || ||||| ||| || ||| ||||||||
Sbjct 3617 TGGATCGACGTCAGCTTACCGTAGTTGGGTTCCGCGACGTGAATATTGAACGATTGCGAC 3558
Query 146695 TGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAAT-CATGCGTTTTGTCTTC-ATTT 146752
||||| || || || ||| || || ||||| | || || |||||| || || |
Sbjct 3557 TGATCGATAAACGCACCGCGATCCGCTGCCATTTTGATGCA--CGTTTTCACTGAGATCT 3500
Query 146753 CCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCT---GGAATACCTTCAATGTTTTGAA 146809
|||| | |||||||| || | || | ||| || ||| ||||| |||||||
Sbjct 3499 CCCATACCGTTTTGTAAAGATCGCGAA---TTTCTTGCGGGATAGTCTCAATCTTTTGAA 3443
Query 146810 TAGAGCCCTTGTGCGCAAAAATAGTGTTTCGTATTTCGGGCGTGTAAAGGTTTAGTTTAA 146869
| || || |||| || | ||| ||| || ||| | | | | ||
Sbjct 3442 TTGATCCATTGTTCGACAGAATCTCGTTCTTCATATCGAGATCCCATAATCCCATGTTGG 3383
Query 146870 TGAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGA 146929
| || || | | | || || || ||||| |||||||| |||| ||||| |||||
Sbjct 3382 TCAGATCCTGCAGGAGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTAT 3323
Query 146930 GATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGG 146989
|| || || ||| | ||||| || || ||||| ||||| | |||||||| || |
Sbjct 3322 TGTATACGTTCGACGTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCG 3263
Query 146990 TTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGG--ATGTT 147047
|| || ||||| |||| || || ||||| || | ||||| || || || ||
Sbjct 3262 AAGCCGTCGGCATCGGGGCCAACAGCAGCGAATTGCGGATACCGT--GCTTGGCTATTTT 3205
Query 147048 GTCCTTCAAAGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTG 147107
|||||||| ||||| ||||| | | ||| | ||||||||| ||||||||
Sbjct 3204 TTCCTTCAACTCCGACCAGTTCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTG 3145
Query 147108 GAGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGC 147167
|| | || ||| | ||||| || || |||| ||| ||| || || ||
Sbjct 3144 CAGGATGCCCTTACTCACCGGACTACCCTCGTACGTTTCGTACGGTCCATCACGAGCGGC 3085
Query 147168 CAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAG 147227
||| |||||||| || || || ||||| | || ||||||||| ||||||| ||| ||
Sbjct 3084 CAACTCACAGCTAGCTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAG 3025
Query 147228 GACGGTCGCTTCTTCGCTCTCGTAAGGCATA-CGCAGAAGCACAAAGGCATCGGCCAAAC 147286
|| || ||||| ||||| || ||| |||| | | || |||||||||| |
Sbjct 3024 CTTTTGAGCCTCCTCGCTTTCGTACGG-ATAGCGCATTAAGATGAACGCATCGGCCATTC 2966
Query 147287 CCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGG 147346
|||| | ||| | ||||| ||||| || |||| |||||| || || | |
Sbjct 2965 CCTGAACACCTATACCGATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACAG 2906
Query 147347 GATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTT 147406
|||||| |||| |||||| |||||||| || || ||| ||| | |||| | | |
Sbjct 2905 GATAGTAGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTATCTTAGCGACTTCCT 2846
Query 147407 TGAGTTTCTCGAAATCATAAGTCCCGTCTT-CGACACGTACGCATTGGTTCACGGCGATA 147465
| || || |||||||| || |||| | || || || ||||| || ||
Sbjct 2845 TCAGCTTGGTAAAATCATACGTTTTATCTTGCTTTACAAAC--AT--GTTCAAAGCAATC 2790
Query 147466 GACGCCAGATTGCAGACGGC-----CGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGG 147520
|| ||||||||||| || || |||| ||||| || |||| ||| |||||||
Sbjct 2789 GAGGCCAGATTGCACACCGCTACTTCGTC-CTTCGACGAA----TACTCCACAATTTCGG 2735
Query 147521 CGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACG 147580
|||||||||| ||||| ||| ||| | ||| |||||||| ||||| |||||||| |
Sbjct 2734 TGCACAGGTTGGAACATTTAATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATG 2675
Query 147581 CGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATA---AACC 147637
| || ||| | |||||||| ||| |||| || || || |||| || | ||| ||||
Sbjct 2674 CATCCTTGTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACC 2615
Query 147638 TATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGT 147697
|| |||||| ||| ||| | | | |||| ||||| || ||||||| | ||
Sbjct 2614 A---CAAGTCCTGTGCTTTGACCTGTCGAATAAAGCGACCCTCTTTCTCGTACCCCGTGT 2558
Query 147698 ACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACA 147757
||| | ||| ||||| || || | ||| || || |||||||| | || |||||||
Sbjct 2557 ACAGCTTCTCGAACTCTTCACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACA 2498
Query 147758 TCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCG 147817
|||| |||||| || | ||| | || || ||| ||||||||||| | |||||| |
Sbjct 2497 TCAGGCTCCACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAG 2438
Query 147818 CGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAG-C 147876
|||| | | ||||| || | || || ||| |||| || | || ||
Sbjct 2437 CGTAGAACATGTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAA 2378
Query 147877 ACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCAC----CTTTACG 147932
|| | | | | || | ||||| ||||| | |||| ||| | || | | || |
Sbjct 2377 ACTCGA-ATACATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTG 2319
Query 147933 CTTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAG 147992
|| |||||||| || || | || || | ||||| ||||||||| ||| || |||
Sbjct 2318 -TTGCCGCCCTGATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAA 2260
Query 147993 GCCGCTCGCAGTGCCGTTGGT---GGA-ATTGATCTTGCTGCCGCGGGCTCGCACTTCGT 148048
||| | | | | ||||| || ||| || || || | |||| | ||| ||
Sbjct 2259 TCCGTTTGAAATACCGTTTGTGCCGGAGATGTATGTTCCCTTCGCGCGGATGCA----GT 2204
Query 148049 GCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCA-ATCGC-CCAATGT 148106
||||||| | |||||||| ||| | ||||||| || ||||||| || || || ||
Sbjct 2203 GCACGTTCAGCCCAATGCCACCGGCCGACTTTGAAAT--CAGCGCACATTGCTTCAGAGT 2146
Query 148107 CGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTG 148166
||| || || || ||||| || | | | |||| |||||| ||| | | ||
Sbjct 2145 ATCGTAAATACCCTCAATGCTATCATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTG 2086
Query 148167 CGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACT 148226
|| | |||| |||| | || | ||| || ||||| ||||| | || |
Sbjct 2085 AGGCCGCTGCGTAGCCGCTGCAAACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAGA 2026
Query 148227 CATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGAC 148286
|| || |||||| || || || | ||||||| || ||||| ||||| | |||||
Sbjct 2025 CAGCAGATTATACGTTTCGATCGCTGCATCGATGTTTTCACCGTGGATGCCGATAGCGAC 1966
Query 148287 GCGCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCC 148346
|||||| ||||| ||||||||||| || ||| || | || |||||||| | |||
Sbjct 1965 GCGCATCAGCATATGCTGTGGTCGCTCAACAATTTTACCCTTTATCTTGAGCAAGTATGA 1906
Query 148347 ATTTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAA 148398
||| | ||||| | || || || ||||| |||| || | ||||||
Sbjct 1905 TCGTTCCAATGTTTTAAAGCCGAAATAGTTGTACCCAAAGTCGCGATCGTAA 1854
>seq29242
Length=5648
Score = 105 bits (116), Expect = 6e-18
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962
|||| || | ||||| ||| | | | || || || |||||||| ||||| || |||
Sbjct 5422 CGCAGACGAAGAACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGACAGGGTG 5481
Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022
|| |||||| ||||| || |||| | |||| |||||||| |||||||| || || ||
Sbjct 5482 CGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCC 5541
Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082
|| ||||| ||| || || | | || | ||||||| ||||| || ||||
Sbjct 5542 TCCTTATCCTGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGA 5601
Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || || || ||||| ||||| | |||||||||||
Sbjct 5602 GTGATGGTCTTTCCGGTCAGCGTTTTCACAAAAATCTGCAT 5642
>seq734
Length=4884
Score = 104 bits (114), Expect = 2e-17
Identities = 156/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| || | |||| ||| | | | || || || || ||||| ||||| || |||
Sbjct 16 ACGCAGACGAAGGACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGACAGGGT 75
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| |||||| ||||| || |||| | |||| |||||||| |||||||| || || ||
Sbjct 76 GCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCC 135
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|| ||||| ||| || || | | || | ||||||| ||||| || ||||
Sbjct 136 CTCCTTATCCTGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAG 195
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || || || ||||||||||| | |||||||||||
Sbjct 196 GGTGATGGTCTTTCCGGTCAGAGTTTTCACAAAAATCTGCAT 237
>seq9735
Length=15595
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| |||| ||| | | | || || || ||||| ||||||||| | || || |
Sbjct 4824 CGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGACCA 4765
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| || ||||| || |||| | |||| |||||||| ||||||||||| |||||||| |||
Sbjct 4764 TCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTA 4705
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || || |||| | || | || || | ||||| || || | || |
Sbjct 4704 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 4645
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| || || || || ||||| | |||||||||||||
Sbjct 4644 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATG 4609
>seq24704
Length=53625
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
|||| ||| | | | |||||||| || |||||||||||| || || || ||| ||
Sbjct 37685 ACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCATCCTCC 37626
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
||||| ||||||| |||| |||||||| ||||| || || || || || || ||
Sbjct 37625 AGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATTCCCTCCTTGTCCTGG 37566
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| || |||| | || | ||||| | ||||| || || | || | || |||
Sbjct 37565 ATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTA 37506
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || || ||||| | ||| ||||||||
Sbjct 37505 CCCGTGAGGGTTTTGACGAAGATCTGCAT 37477
>seq3879
Length=3897
Score = 89.7 bits (98), Expect = 5e-13
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 131917 CAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAG 131976
||| || | | | ||||| || || |||||||| ||| || ||||| ||| || ||
Sbjct 3897 CAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAG 3838
Query 131977 CTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAAT 132036
||| ||||||| |||| | |||||| ||||||||||| ||||| || || || ||
Sbjct 3837 CTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGAT 3778
Query 132037 TTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACC 132096
|| |||| | || | || || | ||||| || || | || | || || ||
Sbjct 3777 CTTGGCCTTCACGTTCTCGATCGTGTCCGATGGCTCGACCTCCAAAGTGATGGTCTTGCC 3718
Query 132097 AGTCAGAGTTTTTATGAAAATCTGCAT 132123
|||||| ||||| | ||| ||||||||
Sbjct 3717 AGTCAGCGTTTTCACGAAGATCTGCAT 3691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476430272430840
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