Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq25975 383 2e-101 seq29242 105 6e-18 seq734 104 2e-17 seq9735 96.9 3e-15 seq24704 89.7 5e-13 seq3879 89.7 5e-13 >seq25975 Length=7706 Score = 383 bits (424), Expect = 2e-101 Identities = 1212/1852 (65%), Gaps = 56/1852 (3%) Strand=Plus/Minus Query 146575 GCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCGCCACGAGTGATTG 146634 || || || |||||||||||||||||||| ||||| | || | |||| || Sbjct 3677 GCCGGCTTGGTGCGCAAATAATACATGCCAGTTTTCAAACCCATTTTCCACCCGTAGAAA 3618 Query 146635 TGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGGCTT 146694 || ||||| |||| | |||| | || ||||| ||| || ||| |||||||| Sbjct 3617 TGGATCGACGTCAGCTTACCGTAGTTGGGTTCCGCGACGTGAATATTGAACGATTGCGAC 3558 Query 146695 TGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAAT-CATGCGTTTTGTCTTC-ATTT 146752 ||||| || || || ||| || || ||||| | || || |||||| || || | Sbjct 3557 TGATCGATAAACGCACCGCGATCCGCTGCCATTTTGATGCA--CGTTTTCACTGAGATCT 3500 Query 146753 CCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCT---GGAATACCTTCAATGTTTTGAA 146809 |||| | |||||||| || | || | ||| || ||| ||||| ||||||| Sbjct 3499 CCCATACCGTTTTGTAAAGATCGCGAA---TTTCTTGCGGGATAGTCTCAATCTTTTGAA 3443 Query 146810 TAGAGCCCTTGTGCGCAAAAATAGTGTTTCGTATTTCGGGCGTGTAAAGGTTTAGTTTAA 146869 | || || |||| || | ||| ||| || ||| | | | | || Sbjct 3442 TTGATCCATTGTTCGACAGAATCTCGTTCTTCATATCGAGATCCCATAATCCCATGTTGG 3383 Query 146870 TGAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGA 146929 | || || | | | || || || ||||| |||||||| |||| ||||| ||||| Sbjct 3382 TCAGATCCTGCAGGAGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTAT 3323 Query 146930 GATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGG 146989 || || || ||| | ||||| || || ||||| ||||| | |||||||| || | Sbjct 3322 TGTATACGTTCGACGTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCG 3263 Query 146990 TTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGG--ATGTT 147047 || || ||||| |||| || || ||||| || | ||||| || || || || Sbjct 3262 AAGCCGTCGGCATCGGGGCCAACAGCAGCGAATTGCGGATACCGT--GCTTGGCTATTTT 3205 Query 147048 GTCCTTCAAAGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTG 147107 |||||||| ||||| ||||| | | ||| | ||||||||| |||||||| Sbjct 3204 TTCCTTCAACTCCGACCAGTTCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTG 3145 Query 147108 GAGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGC 147167 || | || ||| | ||||| || || |||| ||| ||| || || || Sbjct 3144 CAGGATGCCCTTACTCACCGGACTACCCTCGTACGTTTCGTACGGTCCATCACGAGCGGC 3085 Query 147168 CAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAG 147227 ||| |||||||| || || || ||||| | || ||||||||| ||||||| ||| || Sbjct 3084 CAACTCACAGCTAGCTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAG 3025 Query 147228 GACGGTCGCTTCTTCGCTCTCGTAAGGCATA-CGCAGAAGCACAAAGGCATCGGCCAAAC 147286 || || ||||| ||||| || ||| |||| | | || |||||||||| | Sbjct 3024 CTTTTGAGCCTCCTCGCTTTCGTACGG-ATAGCGCATTAAGATGAACGCATCGGCCATTC 2966 Query 147287 CCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGG 147346 |||| | ||| | ||||| ||||| || |||| |||||| || || | | Sbjct 2965 CCTGAACACCTATACCGATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACAG 2906 Query 147347 GATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTT 147406 |||||| |||| |||||| |||||||| || || ||| ||| | |||| | | | Sbjct 2905 GATAGTAGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTATCTTAGCGACTTCCT 2846 Query 147407 TGAGTTTCTCGAAATCATAAGTCCCGTCTT-CGACACGTACGCATTGGTTCACGGCGATA 147465 | || || |||||||| || |||| | || || || ||||| || || Sbjct 2845 TCAGCTTGGTAAAATCATACGTTTTATCTTGCTTTACAAAC--AT--GTTCAAAGCAATC 2790 Query 147466 GACGCCAGATTGCAGACGGC-----CGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGG 147520 || ||||||||||| || || |||| ||||| || |||| ||| ||||||| Sbjct 2789 GAGGCCAGATTGCACACCGCTACTTCGTC-CTTCGACGAA----TACTCCACAATTTCGG 2735 Query 147521 CGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACG 147580 |||||||||| ||||| ||| ||| | ||| |||||||| ||||| |||||||| | Sbjct 2734 TGCACAGGTTGGAACATTTAATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATG 2675 Query 147581 CGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATA---AACC 147637 | || ||| | |||||||| ||| |||| || || || |||| || | ||| |||| Sbjct 2674 CATCCTTGTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACC 2615 Query 147638 TATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGT 147697 || |||||| ||| ||| | | | |||| ||||| || ||||||| | || Sbjct 2614 A---CAAGTCCTGTGCTTTGACCTGTCGAATAAAGCGACCCTCTTTCTCGTACCCCGTGT 2558 Query 147698 ACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACA 147757 ||| | ||| ||||| || || | ||| || || |||||||| | || ||||||| Sbjct 2557 ACAGCTTCTCGAACTCTTCACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACA 2498 Query 147758 TCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCG 147817 |||| |||||| || | ||| | || || ||| ||||||||||| | |||||| | Sbjct 2497 TCAGGCTCCACATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAG 2438 Query 147818 CGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAG-C 147876 |||| | | ||||| || | || || ||| |||| || | || || Sbjct 2437 CGTAGAACATGTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAA 2378 Query 147877 ACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCAC----CTTTACG 147932 || | | | | || | ||||| ||||| | |||| ||| | || | | || | Sbjct 2377 ACTCGA-ATACATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTG 2319 Query 147933 CTTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAG 147992 || |||||||| || || | || || | ||||| ||||||||| ||| || ||| Sbjct 2318 -TTGCCGCCCTGATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAA 2260 Query 147993 GCCGCTCGCAGTGCCGTTGGT---GGA-ATTGATCTTGCTGCCGCGGGCTCGCACTTCGT 148048 ||| | | | | ||||| || ||| || || || | |||| | ||| || Sbjct 2259 TCCGTTTGAAATACCGTTTGTGCCGGAGATGTATGTTCCCTTCGCGCGGATGCA----GT 2204 Query 148049 GCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCA-ATCGC-CCAATGT 148106 ||||||| | |||||||| ||| | ||||||| || ||||||| || || || || Sbjct 2203 GCACGTTCAGCCCAATGCCACCGGCCGACTTTGAAAT--CAGCGCACATTGCTTCAGAGT 2146 Query 148107 CGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTG 148166 ||| || || || ||||| || | | | |||| |||||| ||| | | || Sbjct 2145 ATCGTAAATACCCTCAATGCTATCATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTG 2086 Query 148167 CGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACT 148226 || | |||| |||| | || | ||| || ||||| ||||| | || | Sbjct 2085 AGGCCGCTGCGTAGCCGCTGCAAACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAGA 2026 Query 148227 CATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGAC 148286 || || |||||| || || || | ||||||| || ||||| ||||| | ||||| Sbjct 2025 CAGCAGATTATACGTTTCGATCGCTGCATCGATGTTTTCACCGTGGATGCCGATAGCGAC 1966 Query 148287 GCGCATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCC 148346 |||||| ||||| ||||||||||| || ||| || | || |||||||| | ||| Sbjct 1965 GCGCATCAGCATATGCTGTGGTCGCTCAACAATTTTACCCTTTATCTTGAGCAAGTATGA 1906 Query 148347 ATTTTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAA 148398 ||| | ||||| | || || || ||||| |||| || | |||||| Sbjct 1905 TCGTTCCAATGTTTTAAAGCCGAAATAGTTGTACCCAAAGTCGCGATCGTAA 1854 >seq29242 Length=5648 Score = 105 bits (116), Expect = 6e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| || | ||||| ||| | | | || || || |||||||| ||||| || ||| Sbjct 5422 CGCAGACGAAGAACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGACAGGGTG 5481 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || |||||| ||||| || |||| | |||| |||||||| |||||||| || || || Sbjct 5482 CGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCC 5541 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || ||||| ||| || || | | || | ||||||| ||||| || |||| Sbjct 5542 TCCTTATCCTGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGA 5601 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || || ||||| ||||| | ||||||||||| Sbjct 5602 GTGATGGTCTTTCCGGTCAGCGTTTTCACAAAAATCTGCAT 5642 >seq734 Length=4884 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| || | |||| ||| | | | || || || || ||||| ||||| || ||| Sbjct 16 ACGCAGACGAAGGACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGACAGGGT 75 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || |||||| ||||| || |||| | |||| |||||||| |||||||| || || || Sbjct 76 GCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCC 135 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || ||||| ||| || || | | || | ||||||| ||||| || |||| Sbjct 136 CTCCTTATCCTGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAG 195 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || || ||||||||||| | ||||||||||| Sbjct 196 GGTGATGGTCTTTCCGGTCAGAGTTTTCACAAAAATCTGCAT 237 >seq9735 Length=15595 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| |||| ||| | | | || || || ||||| ||||||||| | || || | Sbjct 4824 CGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGACCA 4765 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || ||||| || |||| | |||| |||||||| ||||||||||| |||||||| ||| Sbjct 4764 TCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTA 4705 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || |||| | || | || || | ||||| || || | || | Sbjct 4704 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 4645 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || || || || || ||||| | ||||||||||||| Sbjct 4644 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATG 4609 >seq24704 Length=53625 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||| ||| | | | |||||||| || |||||||||||| || || || ||| || Sbjct 37685 ACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCATCCTCC 37626 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| ||||||| |||| |||||||| ||||| || || || || || || || Sbjct 37625 AGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATTCCCTCCTTGTCCTGG 37566 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || |||| | || | ||||| | ||||| || || | || | || ||| Sbjct 37565 ATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTTA 37506 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || ||||| | ||| |||||||| Sbjct 37505 CCCGTGAGGGTTTTGACGAAGATCTGCAT 37477 >seq3879 Length=3897 Score = 89.7 bits (98), Expect = 5e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 131917 CAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAG 131976 ||| || | | | ||||| || || |||||||| ||| || ||||| ||| || || Sbjct 3897 CAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAG 3838 Query 131977 CTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAAT 132036 ||| ||||||| |||| | |||||| ||||||||||| ||||| || || || || Sbjct 3837 CTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGAT 3778 Query 132037 TTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACC 132096 || |||| | || | || || | ||||| || || | || | || || || Sbjct 3777 CTTGGCCTTCACGTTCTCGATCGTGTCCGATGGCTCGACCTCCAAAGTGATGGTCTTGCC 3718 Query 132097 AGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||| ||||| | ||| |||||||| Sbjct 3717 AGTCAGCGTTTTCACGAAGATCTGCAT 3691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476430272430840