Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq22281 113 6e-19 >seq22281 Length=11977 Score = 113 bits (124), Expect = 6e-19 Identities = 188/268 (70%), Gaps = 3/268 (1%) Strand=Plus/Minus Query 1455796 AGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACT 1455855 |||| ||||| || || ||||| | |||||||| || || | || | | ||| Sbjct 3680 AGGCGGAGGCTTCGTTCTGGACGGTGGAGGAGGTTGATCTGTCCAAGGATATGAAGGACT 3621 Query 1455856 GGGTGTCGCTGAGCGACGA-CGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGC 1455914 ||| |||||| ||| ||| || || ||||| ||||| || ||||| ||| || Sbjct 3620 GGGATGCGCTGAAAC-CGAGCGAACGTCACTTCATTTCCCACGTGCTTGCCTTCTTT-GC 3563 Query 1455915 CGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATT 1455974 ||| ||||||||||||| |||||| |||| | ||||||| | ||||| || | Sbjct 3562 CGCTTCCGATGGCATCGTGAACGAGAATCTGGTGGAACGCTTTAGCCAGGAGGTACAGGT 3503 Query 1455975 GCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAAC 1456034 | || ||||| | || |||||||||||||| || || |||||| | ||| || | Sbjct 3502 AACGGAAGCACGCTGTTTCTACGGGTTCCAGATTGCGATGGAAAACGTGCACAGCGAGAT 3443 Query 1456035 CTACTCGCTCCTGATCGACACCTACGTC 1456062 ||||| || ||||||||||| ||| || Sbjct 3442 GTACTCACTGCTGATCGACACTTACATC 3415 Score = 109 bits (120), Expect = 8e-18 Identities = 139/185 (75%), Gaps = 11/185 (6%) Strand=Plus/Minus Query 1456096 GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATC--- 1456152 |||||||| ||| |||||| |||| ||| ||||| ||||||||| | || |||||| Sbjct 3295 GCCATCGAAACGCTGCCGTGCGTGAAGAAGAAGGCTGACTGGGCGCTAAACTGGATCTCC 3236 Query 1456153 AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTT-GCCGC-GTCGAGGGC 1456210 | |||| ||| | | |||| | ||||| |||| |||||| ||||| ||||| || Sbjct 3235 AGCAAGAAGG----CTA-ACTTCGGTGAGCGTGTCGT-GGCTTTCGCCGCCGTCGAAGGT 3182 Query 1456211 ATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCC 1456270 ||||| ||| ||||| ||| |||| || |||||||||||||| ||||| ||||| Sbjct 3181 ATCTTCTTCAGCGGCAGCTTCGCTTCCATTTTCTGGCTCAAGAAGCGTGGCCTGATGCCG 3122 Query 1456271 GGTCT 1456275 || || Sbjct 3121 GGACT 3117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7174882054131778