Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq3879 140 3e-28
seq9735 107 2e-18
seq24704 104 2e-17
seq14204 100 3e-16
seq29242 96.9 3e-15
seq734 96.9 3e-15
>seq3879
Length=3897
Score = 140 bits (154), Expect = 3e-28
Identities = 151/199 (76%), Gaps = 6/199 (3%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||||||||||| ||| || || | || |||||||||||||| || ||
Sbjct 3882 CTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAGCTGCTTACCGGCGAA 3823
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| |||||||| || | ||||| || |||||||||| |||||| ||||| |
Sbjct 3822 GATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTT 3763
Query 35665 TGCCACCGTGTCGCTCGAT---TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721
| | |||||| |||| || ||||||| ||||| || || || |||| |||||
Sbjct 3762 CTCGATCGTGTC---CGATGGCTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGCGTTTT 3706
Query 35722 CACAAATATCTGCATTCTG 35740
||| || |||||||| |||
Sbjct 3705 CACGAAGATCTGCATCCTG 3687
>seq9735
Length=15595
Score = 107 bits (118), Expect = 2e-18
Identities = 172/245 (70%), Gaps = 4/245 (2%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | || |||| ||| | || ||||| ||||| ||||| ||||
Sbjct 4836 CCACCACGAAGTCGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAG 4777
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || ||||||||||| || ||||| |||| |||||||| || | ||||
Sbjct 4776 AGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGA 4717
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || ||||| ||| |||||| ||||| | | | | |||||| | || |||
Sbjct 4716 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACC 4657
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA---TTCTGTG-CGC 35745
|| | ||||| || || || || | |||||||| || ||||||| ||||||| ||
Sbjct 4656 TCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATGTTTCTGTGAAGC 4597
Query 35746 ACACA 35750
|||||
Sbjct 4596 ACACA 4592
>seq24704
Length=53625
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586
||||| ||| | ||| ||| || || |||||||| |||| || || || | || ||
Sbjct 37686 CACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCATCCTC 37627
Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646
|||||||||||| || || |||| |||||||| |||| || | | ||||||||||
Sbjct 37626 CAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATTCCCTCCTTGTCCTG 37567
Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706
|||||| ||||| | | | | ||| || | || ||||| | || || || ||
Sbjct 37566 GATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTT 37507
Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||||| | ||||| || || ||||||||
Sbjct 37506 ACCCGTGAGGGTTTTGACGAAGATCTGCAT 37477
>seq14204
Length=1823
Score = 100 bits (110), Expect = 3e-16
Identities = 202/297 (68%), Gaps = 2/297 (1%)
Strand=Plus/Minus
Query 44103 CTAGAGACGGCCTCCACCCATGATCCTTTGTGGAACGCTGCCCAAACACAACTGTTGCGA 44162
|| || |||||| || ||||| | |||||||| | ||||| || || ||
Sbjct 445 CTGGAAACGGCCAAAACGCATGACGATCTGTGGAACTCAGCCCAGCTGCAGATGGTGAAG 386
Query 44163 GAAGGTAAAATGCACCAATACATGCGTATGTATTGGTGCAAGAAGATATTGGAGTGGTCG 44222
|| || || |||||| | | |||| ||||| ||| ||| ||||| |||||||| ||
Sbjct 385 GAGGGCAAGATGCACGGCTTCCTGCGGATGTACTGGGCCAAAAAGATCCTGGAGTGGACG 326
Query 44223 GAAGATGCGCAAACCGCGCTCGTTCATGCCATCTATCTGAACGACAAGTACAGTTTGGAC 44282
|| | | ||||| | ||||||||||||||||| |||||| ||||
Sbjct 325 AAATCGCCCGAGGAAGCGCTTGAGACAGCCATCTATCTGAACGATCGCTACAGTCTGGAT 266
Query 44283 GGTCGCGACCCCAACGGGTACGTAGGATGTATGTGGTCCATTTGCGGTGTCCACGA-CAG 44341
|| ||||| || ||||||||||| || || |||||||| || ||| | ||||| |||
Sbjct 265 GGGCGCGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCCGGCATTCACGATCAG 206
Query 44342 GGCGTGGCGAGAGCTACCCATCTACGGCAAAGTGCGCTACATGAACTACAACGGTTG 44398
|| ||| |||| |||| || || | || ||||||||||| |||| ||
Sbjct 205 GGT-TGGAAGGAGCGTGAAATCTTTGGAAAGATTCGGTACATGAACTATGACGGATG 150
>seq29242
Length=5648
Score = 96.9 bits (106), Expect = 3e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| |||||||| || || | || ||| || | || ||||||||||| || |||||
Sbjct 5452 TCCTTCTGAATGTTATAGTCCGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAG 5511
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| |||||||| || | || | | |||||| ||| ||||| ||| | | |
Sbjct 5512 ATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGAATCTTGGCCTTGACATTC 5571
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||| ||| | || ||||| | ||||| || || || |||| |||||||||
Sbjct 5572 TCAATCGTATCGGATGGCTCAACCTCGAGAGTGATGGTCTTTCCGGTCAGCGTTTTCACA 5631
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 5632 AAAATCTGCAT 5642
>seq734
Length=4884
Score = 96.9 bits (106), Expect = 3e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || ||||| || || | || ||| || | || ||||||||||| || |||||
Sbjct 47 TCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAG 106
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
|||| |||||||| || | || | | |||||| ||| ||||| ||| | | |
Sbjct 107 ATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGAATCTTGGCCTTGACATTC 166
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||| ||| | || ||||| | ||||| || || || |||| ||||||||||
Sbjct 167 TCAATCGTATCGGATGGCTCAACCTCGAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACA 226
Query 35726 AATATCTGCAT 35736
|| ||||||||
Sbjct 227 AAAATCTGCAT 237
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450622473114520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |