Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 264 1e-65
seq9735 123 3e-23
seq29242 116 4e-21
seq734 113 5e-20
seq24704 89.7 5e-13
>seq25975
Length=7706
Score = 264 bits (292), Expect = 1e-65
Identities = 1135/1764 (64%), Gaps = 64/1764 (4%)
Strand=Plus/Plus
Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623
|| || |||||| ||||||| || | ||||| ||||| ||| |||| || || || |
Sbjct 1948 CAGCATATGCTGATGCGCGTCGCTATCGGCATCCACGGTGAAAACATCGATGCAGCGATC 2007
Query 7624 GAAACGTACCAAATGATGTCTTTGAAAC--AGTTTACGCACGCTTCGCCCACCATGTTTG 7681
|||||||| | || ||||| ||| | ||||| ||||| || || ||||||||||
Sbjct 2008 GAAACGTATAATCTGCTGTCT--GAACGCTACTTTACCCACGCCTCACCGACCATGTTTG 2065
Query 7682 CCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACA 7741
| |||| || | |||||| | || || |||||| |||| |||||| || || |
Sbjct 2066 CAGCGGCTACGCAGCGGCCTCAGCTCTCTTCCTGTTTTCTGCTGACCATGTCTGATGATA 2125
Query 7742 GCATCGACGGCATTTACAACACGCTGC-GCGAT-TGCGCCAATATTTCCAAATACGGCGG 7799
|||| || || |||||| | || ||| || || ||||| || ||| || | | |||
Sbjct 2126 GCATTGAGGGTATTTACGATACTCTGAAGCAATGTGCGCTGAT--TTCAAAGTCGGCCGG 2183
Query 7800 CGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAA 7859
|| || || |||||||| || | | ||||| || || | |||| ||| ||
Sbjct 2184 TGGCATTGGGCTGAACGTGCACTGCATCCGCGCGAAGGGAACATACATCTCCGGCACAAA 2243
Query 7860 CGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGT 7919
||| | | | ||| || | ||| ||| ||||||||| ||| || ||| || | ||
Sbjct 2244 CGGTATTTCAAACGGATTGGTGCCGATGCTGCGCGTGTACAACAATACGGCACGGTACGT 2303
Query 7920 AGACCAGGGGGGAAAGCGCAAAGGC-----GCCGCTGCCATCTATTTGGAGCCGTGGCAC 7974
|| ||||| || || |||||| || ||||||||| |||| ||||||||
Sbjct 2304 GGATCAGGGCGGCAACA--AAAGGCCTGGAGCATTCGCCATCTATCTGGAACCGTGGCAT 2361
Query 7975 GCGGACATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCG 8034
| || | | || | || |||| |||| || ||||| | ||
Sbjct 2362 GGTGATGTATTCGAGTTTCTCGATCTAAAGAAAAACACTGGCAAGGAAGAGGTCCGTGCC 2421
Query 8035 CGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGAC 8094
||||| | |||| || ||||| | || |||||||| |||| ||| || | |
Sbjct 2422 CGCGACATGTTCTACGCTCTGTGGATACCGGATCTGTTCATGAAGCGTGTGGAGGCGAAT 2481
Query 8095 GCACAATGGTCGCTCATGTGCCC---CGATCGTTGCCCTTTATTAAAAA-ACGTTTACGG 8150
| | ||| || ||||| || |||| || ||| | | | | |||| ||
Sbjct 2482 GAAATGTGGAGCCTGATGTGTCCACACGATTGT--CCCGGTCTGGCAGATACGTGG--GG 2537
Query 8151 TTCAAAATTTGAACAATTGTACAAACAATACGAACACGACGG-CGCGTACGTGCGGCAAG 8209
| | | || || | |||||| ||||| | || || ||| | | || || |
Sbjct 2538 TGAAGAGTTCGAGAAGCTGTACACGGGGTACGAGAAAGAGGGTCGCTTTATT-CGACAGG 2596
Query 8210 TGAAAGCGCGCGACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGT 8269
| ||||| | ||| || ||| || ||||| | || ||||| || | || |
Sbjct 2597 TCAAAGCACAGGACTTGTGGTTCGCGATCATCGAGTCGCAGGTGGAAACGGGCGTACCAT 2656
Query 8270 ACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTT 8329
||||||||||||| || || ||||| ||||| ||||| || || || ||||||
Sbjct 2657 ACATGCTGTACAAGGATGCATGCAATCGTAAAAGTAATCAGCAGAATGTCGGAACCATTA 2716
Query 8330 GTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTT 8389
|| ||| |||||| | |||||||| |||| || |||||||| || || |
Sbjct 2717 AATGTTCCAACCTGTGCACCGAAATTGTGGAGTATTCGTCGAAGGACGAAGTAGCGGTGT 2776
Query 8390 GCAATCTAGCGTCGGTGTGTTTAAACGCGTTCGTTGATCGACGCTCAAACACTTACGACT 8449
||||||| || ||| | ||| ||| ||| || | | | | | |||| || || |
Sbjct 2777 GCAATCTGGCCTCGATTGCTTTGAACATGTTTGTAAAGCAA-GATAAAACG--TATGATT 2833
Query 8450 TTGAACAAT-TGAAAAACGCCGTGCA---AGTGACGGTACGCAATTTAGATCGCATCATT 8505
|| | ||| |||| | | || | ||| ||| |||||| | | ||||||
Sbjct 2834 TT-ACCAAGCTGAAGGAAGTCGCTAAGATAGTAACG---CGCAATCTGAACAAGATCATT 2889
Query 8506 GATGTCAATTTTTATCCCTT---GGAAG--AAGCGCGCGTATCGAACATGCGCCACAGAC 8560
|||||||| | ||||| | ||| | |||||| || |||||||||||| |||
Sbjct 2890 GATGTCAACTACTATCCTGTCCCGGAGGCTAAGCGC-----TCCAACATGCGCCACCGAC 2944
Query 8561 CCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCCATGTTGCGCCTCCCCTACG 8620
|| | || | || || || || ||||||| ||||| | | ||||| || ||||
Sbjct 2945 CCATCGGTATAGGTGTTCAGGGAATGGCCGATGCGTTCATCTTAATGCGCTATCCGTACG 3004
Query 8621 AAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAAACGGTGTATTACGGCGCAT 8680
||||| | || || | | ||| ||| | ||||| ||||| | |||| ||| |||
Sbjct 3005 AAAGCGAGGAGGCTCAAAAGCTGAACCAACAAATATTCGAAACCATCTATTTCGGAGCAC 3064
Query 8681 TAGAAGCCAGCTGTCAACTTGCC---CGAGAATTGGGCACGTACGAATCGTACGCGGGCA 8737
| ||||| |||||| | | ||| || || ||| | |||||||| |||||| ||| |
Sbjct 3065 TGGAAGCTAGCTGTGAGTTGGCCGCTCGTGA--TGGAC-CGTACGAAACGTACGAGGGTA 3121
Query 8738 GCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGTCACGCCCACCTCTTTGT 8797
| || | || || || |||| ||||| |||||||| ||| || |||
Sbjct 3122 GTCCGGTGAGTAAGGGCATCCTGCAGTACGAAATGTGGAACAAGGAGCCGACTGAGCTGT 3181
Query 8798 GGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGG 8857
|||| ||| || ||||| ||||| || | |||| | |||||||||||| ||
Sbjct 3182 GGAACTGGTCGGAGTTGAAGGAAAAAATAGCCAAGCACGGTATCCGCAATTCGCTGCTGT 3241
Query 8858 TGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGC 8917
|||| ||||| || || |||| || ||||| | || ||||| ||||| || ||||
Sbjct 3242 TGGCCCCGATGCCGACGGCTTCGACAGCCCAAATTCTTGGCAACAATGAATCGTTCGAGC 3301
Query 8918 CGTTCACCAACAACGTGTACGTGAGACGAGTGTTGGCCGGCGATTTTTTAATGCTGAATC 8977
| | ||| ||||| ||| ||||| ||| | | || || ||| || | || |
Sbjct 3302 CCTACACGTCGAACGTATACAATAGACGCGTGCTATCGGGTGAGTTTCAGGTGGTAAACC 3361
Query 8978 GTCATTTGATGCGCGACTTGATCGAAGCGGGCGTTTACGA---CGACA--AAATGCGCGA 9032
||| | ||| || ||| | | ||| | | || ||| | || || ||
Sbjct 3362 ACCATCTCCTGCAGGATCTGACCAACATGGGATTATGGGATCTCGATATGAAGAACGAGA 3421
Query 9033 TGCCATCGTGGAAGCCAACGGCAGCGTTCAGAACATTGACGCGGTGCCTCAACACATTAA 9092
| | || ||| ||| || |||| || ||||| | | || ||| | |||
Sbjct 3422 TTC---TGTCGAA--CAATGGATCAATTCAAAAGATTGAGACTATCCCGCAAGAAATTCG 3476
Query 9093 AGAGCTGTATAAAACCGTTTGGGAAAT-GAAGCAAAGCACGCTGATCGGCATGGCTGCGG 9151
|| || || ||||| || ||||| || || || ||| ||| ||||| ||||
Sbjct 3477 CGATCTTTACAAAACGGTATGGGAGATCTCAGTGAA-AACGTGCATCAAAATGGCAGCGG 3535
Query 9152 ATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTAGCCGCACCAACTT 9211
|| | || || ||||| |||||| ||||| || || | ||| || | ||| | |
Sbjct 3536 ATCGCGGTGCGTTTATCGATCAGTCGCAATCGTTCAATATTCACGTCGCGGAACCCAACT 3595
Query 9212 ACGCTTTGATGTCCAGCATTCATTATTTAACTTGGAAAATGGGTTTAAAAACAGGCATGT 9271
||| | | || | || |||| | |||||||||||||| ||||| |||||||
Sbjct 3596 ACGGTAAGCTGACGTCGATCCATTTCTACGGGTGGAAAATGGGTTTGAAAACTGGCATGT 3655
Query 9272 ACTATTTGCGCACAAAACCCGCCG 9295
| ||||||||||| || || ||||
Sbjct 3656 ATTATTTGCGCACCAAGCCGGCCG 3679
>seq9735
Length=15595
Score = 123 bits (136), Expect = 3e-23
Identities = 160/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
||||||| || || || || || |||||||| ||||| ||||||||| | ||| ||
Sbjct 4827 AGTCGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGA 4768
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| ||||| ||||| |||| |||||||||||| || || ||||||||
Sbjct 4767 CCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCC 4708
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || || || || | ||||| || | || || || || ||
Sbjct 4707 TTATCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTG 4648
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
||||| || ||||| | ||||| |||||||| ||||| ||
Sbjct 4647 ATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATGTT 4607
>seq29242
Length=5648
Score = 116 bits (128), Expect = 4e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| || || || ||||||||||| |||||||| ||||| | |||| | || ||
Sbjct 5434 ACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGACAGGGTGCGGCCATCTTCC 5493
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| || || ||||| |||| |||||||||||| || || || || || || || |||
Sbjct 5494 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGA 5553
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| || | || ||||| | || || |||||||| ||||| ||
Sbjct 5554 ATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGAGTGATGGTCTTT 5613
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| | ||||| || ||||| |||||
Sbjct 5614 CCGGTCAGCGTTTTCACAAAAATCTGCAT 5642
>seq734
Length=4884
Score = 113 bits (124), Expect = 5e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| || || || ||||||||||| || ||||| ||||| | |||| | || ||
Sbjct 29 ACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCTTCC 88
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| || || ||||| |||| |||||||||||| || || || || || || || |||
Sbjct 89 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGA 148
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| || | || ||||| | || || ||||| || ||||| ||
Sbjct 149 ATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGGGTGATGGTCTTT 208
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
||||| | |||||| || ||||| ||||| ||
Sbjct 209 CCGGTCAGAGTTTTCACAAAAATCTGCATATT 240
>seq24704
Length=53625
Score = 89.7 bits (98), Expect = 5e-13
Identities = 153/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| || || || || || || || || |||||||||||| | ||| |
Sbjct 37694 AGACGAAGCACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGACAGCGTGCGT 37635
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| || || || || |||| |||||||||||| ||||| || || ||
Sbjct 37634 CCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATTCCCTCC 37575
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || || || || | || || || | || || || || |||
Sbjct 37574 TTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTA 37515
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
||||| ||||| || | ||||| ||||| || ||||| |||
Sbjct 37514 ATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 37473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505206544449880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |