Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 430 2e-115
seq22281 120 4e-22
>seq25975
Length=7706
Score = 430 bits (476), Expect = 2e-115
Identities = 1211/1841 (66%), Gaps = 30/1841 (2%)
Strand=Plus/Minus
Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454
|| || || || || | ||| ||||| || ||||||| ||| | |||| |||||||||
Sbjct 3677 GCCGGCTTGGTGCGCAAATAATACATGCCAGTTTTCAAACCCATTTTCCACCCGTAGAAA 3618
Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514
|| || || || || || | || || || | |||||||| | ||||||
Sbjct 3617 TGGATCGACGTCAGCTTACCGTAGTTGGGTTCCGCGACGTGAATATTGAACGATTGCGAC 3558
Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTT---TGAGGAATT 68571
|||||||| || || || | ||| || |||||||| || || ||| |||| ||
Sbjct 3557 TGATCGATAAACGCACCGCGATCCGCTGCCATTTTGATGC-ACGTTTTCACTGAG--ATC 3501
Query 68572 TCCCAAATAGTCTTAAAAATCTGTTTGATATCAT-CTGGA-AGGCTCG-TATTTTGAATG 68628
||||| | || || ||| | || || | | ||| || ||| | ||||||||
Sbjct 3500 TCCCATACCGTTTTGTAAAGATCGCGAATTTCTTGCGGGATAGTCTCAATCTTTTGAATT 3441
Query 68629 GATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTT 68688
|||||| | || | ||| ||||| || || || ||| ||| | | ||
Sbjct 3440 GATCCATTGTTCGACAGAATCTCGTTCTTCATATCGAGATCCCATAATCCCATGTTGGTC 3381
Query 68689 AAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTG 68748
| | | |||||||| | || || | ||||| || || |||| ||| | | | ||
Sbjct 3380 AGATCCTGCAGGAGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTATTG 3321
Query 68749 TAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGAT 68808
|| | || || || || || | |||||||| || || |||||||| || || ||
Sbjct 3320 TATACGTTCGACGTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAA 3261
Query 68809 GCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCT 68868
|| || ||||| || |||| || | ||| | | ||| || | ||||| ||
Sbjct 3260 GCCGTCGGCATCGGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCC 3201
Query 68869 TTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGA 68928
|| | | ||| | ||| || |||| || | ||||| | ||||| || ||
Sbjct 3200 TTCAACTCCGACCAGTTCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCAGG 3141
Query 68929 ATTCCGTTACTTGCATATGAT--CCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTA 68986
|| || ||||| || || || | || ||||| || ||||| || | | || |
Sbjct 3140 ATGCCCTTACT--CACCGGACTACCCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCA 3083
Query 68987 GTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT 69046
||||| || || || | ||| ||| |||| || |||||||| || | | || || |
Sbjct 3082 ACTCACAGCTAGCTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGCT 3023
Query 69047 CTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCT 69106
||| || || || ||| | ||||| | | | || || ||||| |||| |||||
Sbjct 3022 TTTGAGCCTCCTCGCTTTCGTACGGATAGCGCATTAAGATGAACGCATCGGCCATTCCCT 2963
Query 69107 GAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGAT 69166
|||| || |||||||| |||| || | | | || || | | ||| || || | |||||
Sbjct 2962 GAACACCTATACCGATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACAGGAT 2903
Query 69167 AATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTA 69226
| || || | ||| || || || || ||||| || ||||| ||| | || ||||| |
Sbjct 2902 AGTAGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTATCTTAGCGACTTCCTTCA 2843
Query 69227 GTTTGAGAAAATCAAATCGTCCATCTA---TAACAAACATATTCAGTGCTACAGATGCTA 69283
| ||| ||||||| | | |||| | |||||||| |||| || | || || |
Sbjct 2842 GCTTGGTAAAATCATACGTTTTATCTTGCTTTACAAACATGTTCAAAGCAATCGAGGCCA 2783
Query 69284 GATTACAAACTGCTACCTCAT---TAGAATTTGCATATTGTATTATCTCTGTACATAGAT 69340
|||| || || ||||| || | | || | ||| | | || || || || || |
Sbjct 2782 GATTGCACACCGCTACTTCGTCCTTCGAC---GAATACTCCACAATTTCGGTGCACAGGT 2726
Query 69341 TACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGT 69400
| |||||| || || || | ||| ||||||||||| || || || || |||||||
Sbjct 2725 TGGAACATTTAATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCATCCTTGT 2666
Query 69401 AAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCC 69460
| || || | || || ||||| | ||| || ||||| || | ||| | | ||
Sbjct 2665 ACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCACAAGTCCT 2606
Query 69461 TAGCATTTATTACGGTCTTGTAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTC 69518
|| || | | ||| ||| || | ||||| || || || || ||| ||
Sbjct 2605 GTGCTTTGAC--CTGTCGAATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTC 2548
Query 69519 GAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCA 69578
||| || || ||||| ||| ||| || ||||| || | ||||||||||| |||
Sbjct 2547 GAACTCTTCACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAGGCTCCA 2488
Query 69579 CACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAG 69638
|| |||| ||| || || ||||| || ||||| || ||||| ||||| || |
Sbjct 2487 CATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACAT 2428
Query 69639 ATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAAT 69698
|| | || | ||||| || || || ||||| || |||||||||||||| | |
Sbjct 2427 GTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAACTCGAATAC 2368
Query 69699 ATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTG 69758
|||| |||||| ||||| ||||| || || | |||| || | ||| || || |||||
Sbjct 2367 ATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTGTTGCCGCCCTG 2308
Query 69759 ATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTT 69818
||| | ||| | || || || || || || | ||||||||| | | || || || |
Sbjct 2307 ATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAAT 2248
Query 69819 ACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTA 69877
||| ||||| || || || || |||| | ||||| || | | | | || || |
Sbjct 2247 ACCGTTTGTGCCGGAGATGTATGTTCCCTTCGCGCGGATGC-AGTGCACGTTCAGCCCAA 2189
Query 69878 TTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTA 69937
| || || ||| || || || || ||||| | |||| || || || |||||||| |
Sbjct 2188 TGCCACCGGCCGACTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATACCCTCAA 2129
Query 69938 TGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCG 69997
|||||||||| |||| | || ||||||||| ||| | ||| | | || |||
Sbjct 2128 TGCTATCATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTGCGTAGCCG 2069
Query 69998 CATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTT 70057
| ||| | || || || ||||| || || | |||||| |||||||| || ||||
Sbjct 2068 CTGCAAACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAGACAGCAGATTATACGTTT 2009
Query 70058 CAATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGC 70116
| || |||| || || | ||| | || || || || ||||| ||||||| |||||||
Sbjct 2008 CGATCGCTGCATCGATGTTTTCACCG-TGGATGCCGATAGCGACGCGCATCAGCATATGC 1950
Query 70117 TGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTA 70176
|| ||||| || || ||||| ||||| || | || ||||||| ||||| ||||||
Sbjct 1949 TGTGGTCGCTCAACAATTTTACCCTTTATCTTGAGCAAGTATGATCGTTCCAATGTTTTA 1890
Query 70177 AACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217
|| || ||||||||||| |||||| | |||||||||||
Sbjct 1889 AAGCCGAAATAGTTGTACCCAAAGTCGCGATCGTAAATAAT 1849
>seq22281
Length=11977
Score = 120 bits (132), Expect = 4e-22
Identities = 182/257 (71%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 39605 TTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTA 39664
|| ||||| | |||||||||||| || || || || || || | ||| | |||||
Sbjct 3048 TTGAACATCAGGCAGGCGAAGTCGCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTC 3107
Query 39665 GAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT 39724
|| || |||||||| ||||| || |||||||| |||||||| || |||| ||| ||
Sbjct 3108 GAGAAGGTGAGTCCCGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTG 3167
Query 39725 CCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG-T 39783
|| |||||||| ||||| || || || || || || | | ||| ||| | | |
Sbjct 3168 CCGCTGAAGAAGATACCTTCGACGGCGGCGAAAGCCACGACACGCTCACCGAAGTTAGCC 3227
Query 39784 ATCATTATG--TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTT 39841
|| | || ||||| || | ||||| ||||| |||||||| || || |||| |||
Sbjct 3228 TTCTTGCTGGAGATCCAGTTTAGCGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCGTT 3287
Query 39842 TCTATAGCATTAAAGAG 39858
|| || |||||||| ||
Sbjct 3288 TCGATGGCATTAAACAG 3304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686648040833160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |