Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq25975 430 2e-115 seq22281 120 4e-22 >seq25975 Length=7706 Score = 430 bits (476), Expect = 2e-115 Identities = 1211/1841 (66%), Gaps = 30/1841 (2%) Strand=Plus/Minus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || || || || || | ||| ||||| || ||||||| ||| | |||| ||||||||| Sbjct 3677 GCCGGCTTGGTGCGCAAATAATACATGCCAGTTTTCAAACCCATTTTCCACCCGTAGAAA 3618 Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514 || || || || || || | || || || | |||||||| | |||||| Sbjct 3617 TGGATCGACGTCAGCTTACCGTAGTTGGGTTCCGCGACGTGAATATTGAACGATTGCGAC 3558 Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTT---TGAGGAATT 68571 |||||||| || || || | ||| || |||||||| || || ||| |||| || Sbjct 3557 TGATCGATAAACGCACCGCGATCCGCTGCCATTTTGATGC-ACGTTTTCACTGAG--ATC 3501 Query 68572 TCCCAAATAGTCTTAAAAATCTGTTTGATATCAT-CTGGA-AGGCTCG-TATTTTGAATG 68628 ||||| | || || ||| | || || | | ||| || ||| | |||||||| Sbjct 3500 TCCCATACCGTTTTGTAAAGATCGCGAATTTCTTGCGGGATAGTCTCAATCTTTTGAATT 3441 Query 68629 GATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTT 68688 |||||| | || | ||| ||||| || || || ||| ||| | | || Sbjct 3440 GATCCATTGTTCGACAGAATCTCGTTCTTCATATCGAGATCCCATAATCCCATGTTGGTC 3381 Query 68689 AAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTG 68748 | | | |||||||| | || || | ||||| || || |||| ||| | | | || Sbjct 3380 AGATCCTGCAGGAGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTATTG 3321 Query 68749 TAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGAT 68808 || | || || || || || | |||||||| || || |||||||| || || || Sbjct 3320 TATACGTTCGACGTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAA 3261 Query 68809 GCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCT 68868 || || ||||| || |||| || | ||| | | ||| || | ||||| || Sbjct 3260 GCCGTCGGCATCGGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCC 3201 Query 68869 TTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGA 68928 || | | ||| | ||| || |||| || | ||||| | ||||| || || Sbjct 3200 TTCAACTCCGACCAGTTCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCAGG 3141 Query 68929 ATTCCGTTACTTGCATATGAT--CCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTA 68986 || || ||||| || || || | || ||||| || ||||| || | | || | Sbjct 3140 ATGCCCTTACT--CACCGGACTACCCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCA 3083 Query 68987 GTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT 69046 ||||| || || || | ||| ||| |||| || |||||||| || | | || || | Sbjct 3082 ACTCACAGCTAGCTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGCT 3023 Query 69047 CTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCT 69106 ||| || || || ||| | ||||| | | | || || ||||| |||| ||||| Sbjct 3022 TTTGAGCCTCCTCGCTTTCGTACGGATAGCGCATTAAGATGAACGCATCGGCCATTCCCT 2963 Query 69107 GAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGAT 69166 |||| || |||||||| |||| || | | | || || | | ||| || || | ||||| Sbjct 2962 GAACACCTATACCGATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACAGGAT 2903 Query 69167 AATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTA 69226 | || || | ||| || || || || ||||| || ||||| ||| | || ||||| | Sbjct 2902 AGTAGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTATCTTAGCGACTTCCTTCA 2843 Query 69227 GTTTGAGAAAATCAAATCGTCCATCTA---TAACAAACATATTCAGTGCTACAGATGCTA 69283 | ||| ||||||| | | |||| | |||||||| |||| || | || || | Sbjct 2842 GCTTGGTAAAATCATACGTTTTATCTTGCTTTACAAACATGTTCAAAGCAATCGAGGCCA 2783 Query 69284 GATTACAAACTGCTACCTCAT---TAGAATTTGCATATTGTATTATCTCTGTACATAGAT 69340 |||| || || ||||| || | | || | ||| | | || || || || || | Sbjct 2782 GATTGCACACCGCTACTTCGTCCTTCGAC---GAATACTCCACAATTTCGGTGCACAGGT 2726 Query 69341 TACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGT 69400 | |||||| || || || | ||| ||||||||||| || || || || ||||||| Sbjct 2725 TGGAACATTTAATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCATCCTTGT 2666 Query 69401 AAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCC 69460 | || || | || || ||||| | ||| || ||||| || | ||| | | || Sbjct 2665 ACAGCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCACAAGTCCT 2606 Query 69461 TAGCATTTATTACGGTCTTGTAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTC 69518 || || | | ||| ||| || | ||||| || || || || ||| || Sbjct 2605 GTGCTTTGAC--CTGTCGAATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTC 2548 Query 69519 GAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCA 69578 ||| || || ||||| ||| ||| || ||||| || | ||||||||||| ||| Sbjct 2547 GAACTCTTCACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAGGCTCCA 2488 Query 69579 CACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAG 69638 || |||| ||| || || ||||| || ||||| || ||||| ||||| || | Sbjct 2487 CATTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACAT 2428 Query 69639 ATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAAT 69698 || | || | ||||| || || || ||||| || |||||||||||||| | | Sbjct 2427 GTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAACTCGAATAC 2368 Query 69699 ATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTG 69758 |||| |||||| ||||| ||||| || || | |||| || | ||| || || ||||| Sbjct 2367 ATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTGTTGCCGCCCTG 2308 Query 69759 ATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTT 69818 ||| | ||| | || || || || || || | ||||||||| | | || || || | Sbjct 2307 ATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAAT 2248 Query 69819 ACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTA 69877 ||| ||||| || || || || |||| | ||||| || | | | | || || | Sbjct 2247 ACCGTTTGTGCCGGAGATGTATGTTCCCTTCGCGCGGATGC-AGTGCACGTTCAGCCCAA 2189 Query 69878 TTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTA 69937 | || || ||| || || || || ||||| | |||| || || || |||||||| | Sbjct 2188 TGCCACCGGCCGACTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATACCCTCAA 2129 Query 69938 TGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCG 69997 |||||||||| |||| | || ||||||||| ||| | ||| | | || ||| Sbjct 2128 TGCTATCATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTGCGTAGCCG 2069 Query 69998 CATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTT 70057 | ||| | || || || ||||| || || | |||||| |||||||| || |||| Sbjct 2068 CTGCAAACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAGACAGCAGATTATACGTTT 2009 Query 70058 CAATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGC 70116 | || |||| || || | ||| | || || || || ||||| ||||||| ||||||| Sbjct 2008 CGATCGCTGCATCGATGTTTTCACCG-TGGATGCCGATAGCGACGCGCATCAGCATATGC 1950 Query 70117 TGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTA 70176 || ||||| || || ||||| ||||| || | || ||||||| ||||| |||||| Sbjct 1949 TGTGGTCGCTCAACAATTTTACCCTTTATCTTGAGCAAGTATGATCGTTCCAATGTTTTA 1890 Query 70177 AACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 || || ||||||||||| |||||| | ||||||||||| Sbjct 1889 AAGCCGAAATAGTTGTACCCAAAGTCGCGATCGTAAATAAT 1849 >seq22281 Length=11977 Score = 120 bits (132), Expect = 4e-22 Identities = 182/257 (71%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 39605 TTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTA 39664 || ||||| | |||||||||||| || || || || || || | ||| | ||||| Sbjct 3048 TTGAACATCAGGCAGGCGAAGTCGCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTC 3107 Query 39665 GAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT 39724 || || |||||||| ||||| || |||||||| |||||||| || |||| ||| || Sbjct 3108 GAGAAGGTGAGTCCCGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTG 3167 Query 39725 CCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG-T 39783 || |||||||| ||||| || || || || || || | | ||| ||| | | | Sbjct 3168 CCGCTGAAGAAGATACCTTCGACGGCGGCGAAAGCCACGACACGCTCACCGAAGTTAGCC 3227 Query 39784 ATCATTATG--TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTT 39841 || | || ||||| || | ||||| ||||| |||||||| || || |||| ||| Sbjct 3228 TTCTTGCTGGAGATCCAGTTTAGCGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCGTT 3287 Query 39842 TCTATAGCATTAAAGAG 39858 || || |||||||| || Sbjct 3288 TCGATGGCATTAAACAG 3304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686648040833160