Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq24506 113 4e-20 >seq24506 Length=9138 Score = 113 bits (124), Expect = 4e-20 Identities = 192/277 (69%), Gaps = 6/277 (2%) Strand=Plus/Minus Query 19542 AAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC 19601 |||| ||| || |||||||| | |||||| | || ||||| || || | ||| | Sbjct 4217 AAGTGGTTTACATATTATAATTTTCGATGAAATTGATGCAATTTGCAAAGCTCGTGGTAC 4158 Query 19602 TG---GTGTAAAT---GGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGA 19655 || | | |||| || || ||||| || |||||||||||||| || ||||| | || Sbjct 4157 TGTCGGAGGAAATTCTGGTGTTCATGATACCGTTGTCAATCAACTGTTGGCAAAAATTGA 4098 Query 19656 CGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAAT 19715 || || | ||| | || || || || || ||||| ||||||||| || || | || Sbjct 4097 TGGAGTAGAGCAATTAAACAACATATTGGTCATTGGGATGACTAATCGAAAAGATATGAT 4038 Query 19716 AGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGA 19775 |||| || ||||||||||| || || | ||| || | || ||||| | | | || | Sbjct 4037 AGACGAAGCGTTATTACGACCTGGCCGTCTAGAAGTACAAATGGAAATCAGCCTTCCTAA 3978 Query 19776 TGAATGTGGACGTGTGGAAATTTTAAACATACATACA 19812 ||| || || ||| | ||||| ||||| |||||| Sbjct 3977 CGAAGAAGGTCGCGTGCAGATTTTGAACATCCATACA 3941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397308892715845