Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 286 3e-72
seq24704 107 2e-18
seq29242 100 2e-16
seq734 91.5 1e-13
seq9735 86.0 5e-12
>seq25975
Length=7706
Score = 286 bits (316), Expect = 3e-72
Identities = 1045/1613 (65%), Gaps = 51/1613 (3%)
Strand=Plus/Minus
Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465
|| || || || || || || ||||| ||||||||||||||||||||||||||||||
Sbjct 3707 TTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTGCGCAAATAATACATGCCA 3648
Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTGGTAATTGGGT 130525
||||| | || ||||| || || ||||| || | ||| ||||||
Sbjct 3647 GTTTTCAAACCCATTTTCCACCCGTAGAAATGGATCGACGTCAGCTTACCGTAGTTGGGT 3588
Query 130526 TGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCC 130585
| ||| ||| || |||| ||||||||| ||||| ||||| || || | || || |||
Sbjct 3587 TCCGCGACGTGAATATTGAACGATTGCGACTGATCGATAAACGCACCGCGATCCGCTGCC 3528
Query 130586 ATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTG 130644
|| | || ||| | ||| | | |||||||| | || ||||| ||||| | ||| |
Sbjct 3527 ATTTTGATGCACGTTTTCACTGAG-ATCTCCCATACCGTTTTGTAAAGATCGCGAATTTC 3469
Query 130645 TTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCAT 130704
|| || || | ||||| ||||| || ||||| | | ||| ||||| |||
Sbjct 3468 TTGCGGGATAGTCTCAATCTTTTGAATTGATCCATTGTTCGACAGAATCTCGTTCTTCAT 3409
Query 130705 ACTTTTATCGTACAATCCAA-GCTGTACAAGATCTTTTACCAAATGATTATTAATGATTT 130763
| ||| | ||||| | | || || |||| | | | ||| | || | | |
Sbjct 3408 ATCGAGATCCCATAATCCCATGTTGGTCA-GATCCTGCAGGAGATGGTGGTTTACCACCT 3350
Query 130764 GAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATT 130823
|||| ||||| | || ||||||||| ||| | ||| |||| | || || || ||||
Sbjct 3349 GAAACTCACCCGATAGCACGCGTCTATTGTATACGTTCGACGTGTAGGGCTCGAACGATT 3290
Query 130824 CGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAAT 130883
| |||||||| | ||||| ||||| | || || ||||| |||| | || ||||
Sbjct 3289 CATTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAAT 3230
Query 130884 TACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAG 130943
| || | ||||||| | | |||||| |||||| || ||| | ||| || || |
Sbjct 3229 TGCGGATACCGTGCTTGGCTATTTTTTCCTTCAACTCCGACCAGTTCCACAGCTCAGTCG 3170
Query 130944 GTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGATTCGA 131003
| | | ||||||||||| || | || || ||||| ||||| | ||||| |||
Sbjct 3169 GCT---CCTTGTTCCACATTTCGTACTGCAGGATGCCCTTACTCACCGGACTACCCTCGT 3113
Query 131004 ACGATTCGTAGATTCCTTCGACACGAGC---CAGGTCGTTGCTAGCTTCCAAAGCTCCGT 131060
||| |||||| ||| || |||||| || || ||||||||||| ||||||
Sbjct 3112 ACGTTTCGTACGGTCCATC---ACGAGCGGCCAACTCACAGCTAGCTTCCAGTGCTCCGA 3056
Query 131061 AATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGAA 131120
|||| ||||||||| ||||||| || | | || || | | ||| ||||| |||
Sbjct 3055 AATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTTGAGCCTCCTCGCTTTCGTACGGAT 2996
Query 131121 ATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTATGTT 131180
| |||||| || || || || || | ||||| | || | || | |||| ||
Sbjct 2995 AGCGCATTAAGATGAACGCATCGGCCATTCCCTGAACACCTATACCGATGGGTCGGTGGC 2936
Query 131181 TTAAATTACATTTACGC-GAACATTCGG--TGGGATAAAGGTTAATGTCAATTATTTTGT 131237
| || | ||| | | | ||| ||||| ||| | ||||| || ||||
Sbjct 2935 GCATGTTGGA---GCGCTTAGCCTCCGGGACAGGATAGTAGTTGACATCAATGATCTTGT 2879
Query 131238 TTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTGCCAG 131297
| | ||||||| ||| || | | ||| |||| ||| |||||| ||||
Sbjct 2878 TCAGATTGCGCGTTACTATCTTAGCGACTTCCTTCAGCTTGGTAAAATCATACGT---TT 2822
Query 131298 TTTCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGTTTCGT 131357
| || | |||||||| || | | || || |||||||| || || || |||||
Sbjct 2821 TATCTTGCTTTACAAACATGTTCAAAGCAATCGAGGCCAGATTGCACACCGCTACTTCGT 2762
Query 131358 CATAATCG--CAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCAA 131415
| | ||| |||||| |||||||||| ||||| || | || ||||| || |
Sbjct 2761 CCT--TCGACGAATACTCCACAATTTCGGTGCACAGGTTGGAACATTTAATGGTTCCGAC 2704
Query 131416 ATTTTGTTGATTGCTTTTAGCATTCACATG-GTCCTTGTACATCATGTAGGGCGTGCCCG 131474
||| || ||||| |||||| ||| |||| |||||||||| |||||| || |||||
Sbjct 2703 ATTCTGCTGATTACTTTTACGATT-GCATGCATCCTTGTACAGCATGTATGGTACGCCCG 2645
Query 131475 TTTCGACTTGAGTTTCAATAAT---GTATCGAAAG---AGT-TTTCGAGCAGACAATTGA 131527
|||| || || | || || || | | | ||| || || || | | | | |
Sbjct 2644 TTTCCACCTGCGACTCGATGATCGCGAACCACAAGTCCTGTGCTTTGACCTGTCGA---A 2588
Query 131528 TATTTGTATTGGCCGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAAC 131587
|| | | || ||| ||||| ||||| | | || || | || || ||
Sbjct 2587 TA----AAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCACCCCAC 2532
Query 131588 G-AACTGTCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTC 131646
| | ||| ||| | |||||| ||| |||||||| || ||||| | ||| ||
Sbjct 2531 GTATCTG-CCAGACCGGGACAATCGTGTGGACACATCAGGCTCCACATTTCATTCGCCTC 2473
Query 131647 AACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTT 131706
|| |||||||| |||| |||||| | ||| | ||||| |||| || | ||
Sbjct 2472 CACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACATGTCGCGGGCACGGAC 2413
Query 131707 CTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGG 131766
|||||| | || | |||| || | || | ||| || || | || ||||||| ||
Sbjct 2412 CTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAACTCGAATACATCACCATGCCACGG 2353
Query 131767 TTCCAAATACACTGCCATTGC-----GCCTTTGCGCTTACCGCCTTGATTAACATGACGA 131821
||||| ||| | || | ||| |||||| || ||||| |||| || | ||
Sbjct 2352 TTCCAGATAGATGGCGAATGCTCCAGGCCTTT--TGTTGCCGCCCTGATCCACGTACCGT 2295
Query 131822 ACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTC 131881
|| | |||||||| ||||||| ||| ||| |||| ||||| | | || || ||||
Sbjct 2294 GCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAATACCGTTTGTGCCG 2235
Query 131882 TTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTAT 131941
||||| | || || || | ||| ||| ||||| || ||||| || ||| | |
Sbjct 2234 GAGATGTATGTTCCCTTCGCGCGGATGCAGTGCACGTTCAGCCCAATGCCACCGGCCGAC 2175
Query 131942 TTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTC 131994
|| || || || || |||| | ||||| | || ||||| || | ||| ||
Sbjct 2174 TTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATACCCTCAATGCTATC 2122
>seq24704
Length=53625
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| ||||||| || | |||| ||| | ||||| ||||| || || ||||||||| |
Sbjct 37703 CCACCGCGCAGACGAAGCACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGAC 37644
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| |||| | || || ||||| ||||||||| | || |||||||| |||||||||||
Sbjct 37643 AGCGTGCGTCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGG 37584
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200
| ||||| || || |||||| |||| | || | || || | || || ||
Sbjct 37583 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 37524
Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
|| || || || | || ||||| || ||||| || ||||| |||||
Sbjct 37523 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 37477
>seq29242
Length=5648
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| ||||||| || | |||| ||| | || || || || ||||| || ||||| |
Sbjct 5416 CCACCGCGCAGACGAAGAACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGAC 5475
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | |||| | ||||| ||||| || ||||| | || |||||||| ||||| || ||
Sbjct 5476 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGG 5535
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199
| ||||| ||||| |||||| || | | || | || || | ||||| ||||
Sbjct 5536 ATTCCCTCCTTATCCTGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCT-CAAC 5594
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| ||||| || | || || ||||| ||||||||||| || ||||||
Sbjct 5595 CTCGAGAGTGATGGTCTTTCCGGTCAGCGTTTTCACAAAAATCTGCATA 5643
>seq734
Length=4884
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| || | |||| ||| | || || || || || || || ||||| |
Sbjct 11 CCACCACGCAGACGAAGGACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGAC 70
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | |||| | ||||| ||||| || ||||| | || |||||||| ||||| || ||
Sbjct 71 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGG 130
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199
| ||||| ||||| |||||| || | | || | || || | ||||| ||||
Sbjct 131 ATTCCCTCCTTATCCTGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCT-CAAC 189
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || || | || || ||||||||||||||||| || ||||||
Sbjct 190 CTCGAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACAAAAATCTGCATA 238
>seq9735
Length=15595
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092
|||| |||| ||| | || || || || ||||||||||||||| | |||| |
Sbjct 4824 CGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGACCA 4765
Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152
|| || ||||| || ||||| | || |||||||| ||||| || || | || || |||
Sbjct 4764 TCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTA 4705
Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212
|| ||||||| |||| | || | ||||| | | || || || || || ||
Sbjct 4704 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 4645
Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
| ||||| || || |||||||| || || |||||
Sbjct 4644 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 4610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424777122350328
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