Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq25975 286 3e-72 seq24704 107 2e-18 seq29242 100 2e-16 seq734 91.5 1e-13 seq9735 86.0 5e-12 >seq25975 Length=7706 Score = 286 bits (316), Expect = 3e-72 Identities = 1045/1613 (65%), Gaps = 51/1613 (3%) Strand=Plus/Minus Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465 || || || || || || || ||||| |||||||||||||||||||||||||||||| Sbjct 3707 TTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTGCGCAAATAATACATGCCA 3648 Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTGGTAATTGGGT 130525 ||||| | || ||||| || || ||||| || | ||| |||||| Sbjct 3647 GTTTTCAAACCCATTTTCCACCCGTAGAAATGGATCGACGTCAGCTTACCGTAGTTGGGT 3588 Query 130526 TGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCC 130585 | ||| ||| || |||| ||||||||| ||||| ||||| || || | || || ||| Sbjct 3587 TCCGCGACGTGAATATTGAACGATTGCGACTGATCGATAAACGCACCGCGATCCGCTGCC 3528 Query 130586 ATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTG 130644 || | || ||| | ||| | | |||||||| | || ||||| ||||| | ||| | Sbjct 3527 ATTTTGATGCACGTTTTCACTGAG-ATCTCCCATACCGTTTTGTAAAGATCGCGAATTTC 3469 Query 130645 TTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCAT 130704 || || || | ||||| ||||| || ||||| | | ||| ||||| ||| Sbjct 3468 TTGCGGGATAGTCTCAATCTTTTGAATTGATCCATTGTTCGACAGAATCTCGTTCTTCAT 3409 Query 130705 ACTTTTATCGTACAATCCAA-GCTGTACAAGATCTTTTACCAAATGATTATTAATGATTT 130763 | ||| | ||||| | | || || |||| | | | ||| | || | | | Sbjct 3408 ATCGAGATCCCATAATCCCATGTTGGTCA-GATCCTGCAGGAGATGGTGGTTTACCACCT 3350 Query 130764 GAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATT 130823 |||| ||||| | || ||||||||| ||| | ||| |||| | || || || |||| Sbjct 3349 GAAACTCACCCGATAGCACGCGTCTATTGTATACGTTCGACGTGTAGGGCTCGAACGATT 3290 Query 130824 CGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAAT 130883 | |||||||| | ||||| ||||| | || || ||||| |||| | || |||| Sbjct 3289 CATTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAAT 3230 Query 130884 TACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAG 130943 | || | ||||||| | | |||||| |||||| || ||| | ||| || || | Sbjct 3229 TGCGGATACCGTGCTTGGCTATTTTTTCCTTCAACTCCGACCAGTTCCACAGCTCAGTCG 3170 Query 130944 GTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGACTGGATTCGA 131003 | | | ||||||||||| || | || || ||||| ||||| | ||||| ||| Sbjct 3169 GCT---CCTTGTTCCACATTTCGTACTGCAGGATGCCCTTACTCACCGGACTACCCTCGT 3113 Query 131004 ACGATTCGTAGATTCCTTCGACACGAGC---CAGGTCGTTGCTAGCTTCCAAAGCTCCGT 131060 ||| |||||| ||| || |||||| || || ||||||||||| |||||| Sbjct 3112 ACGTTTCGTACGGTCCATC---ACGAGCGGCCAACTCACAGCTAGCTTCCAGTGCTCCGA 3056 Query 131061 AATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGAA 131120 |||| ||||||||| ||||||| || | | || || | | ||| ||||| ||| Sbjct 3055 AATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTTGAGCCTCCTCGCTTTCGTACGGAT 2996 Query 131121 ATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGTCTATGTT 131180 | |||||| || || || || || | ||||| | || | || | |||| || Sbjct 2995 AGCGCATTAAGATGAACGCATCGGCCATTCCCTGAACACCTATACCGATGGGTCGGTGGC 2936 Query 131181 TTAAATTACATTTACGC-GAACATTCGG--TGGGATAAAGGTTAATGTCAATTATTTTGT 131237 | || | ||| | | | ||| ||||| ||| | ||||| || |||| Sbjct 2935 GCATGTTGGA---GCGCTTAGCCTCCGGGACAGGATAGTAGTTGACATCAATGATCTTGT 2879 Query 131238 TTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACGTGCCAG 131297 | | ||||||| ||| || | | ||| |||| ||| |||||| |||| Sbjct 2878 TCAGATTGCGCGTTACTATCTTAGCGACTTCCTTCAGCTTGGTAAAATCATACGT---TT 2822 Query 131298 TTTCGAGGTTTACAAATTGATTTACACATATTGACGCCAGATTACAAACTGCCGTTTCGT 131357 | || | |||||||| || | | || || |||||||| || || || ||||| Sbjct 2821 TATCTTGCTTTACAAACATGTTCAAAGCAATCGAGGCCAGATTGCACACCGCTACTTCGT 2762 Query 131358 CATAATCG--CAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCAA 131415 | | ||| |||||| |||||||||| ||||| || | || ||||| || | Sbjct 2761 CCT--TCGACGAATACTCCACAATTTCGGTGCACAGGTTGGAACATTTAATGGTTCCGAC 2704 Query 131416 ATTTTGTTGATTGCTTTTAGCATTCACATG-GTCCTTGTACATCATGTAGGGCGTGCCCG 131474 ||| || ||||| |||||| ||| |||| |||||||||| |||||| || ||||| Sbjct 2703 ATTCTGCTGATTACTTTTACGATT-GCATGCATCCTTGTACAGCATGTATGGTACGCCCG 2645 Query 131475 TTTCGACTTGAGTTTCAATAAT---GTATCGAAAG---AGT-TTTCGAGCAGACAATTGA 131527 |||| || || | || || || | | | ||| || || || | | | | | Sbjct 2644 TTTCCACCTGCGACTCGATGATCGCGAACCACAAGTCCTGTGCTTTGACCTGTCGA---A 2588 Query 131528 TATTTGTATTGGCCGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAAC 131587 || | | || ||| ||||| ||||| | | || || | || || || Sbjct 2587 TA----AAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCACCCCAC 2532 Query 131588 G-AACTGTCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTC 131646 | | ||| ||| | |||||| ||| |||||||| || ||||| | ||| || Sbjct 2531 GTATCTG-CCAGACCGGGACAATCGTGTGGACACATCAGGCTCCACATTTCATTCGCCTC 2473 Query 131647 AACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTT 131706 || |||||||| |||| |||||| | ||| | ||||| |||| || | || Sbjct 2472 CACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACATGTCGCGGGCACGGAC 2413 Query 131707 CTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGG 131766 |||||| | || | |||| || | || | ||| || || | || ||||||| || Sbjct 2412 CTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAACTCGAATACATCACCATGCCACGG 2353 Query 131767 TTCCAAATACACTGCCATTGC-----GCCTTTGCGCTTACCGCCTTGATTAACATGACGA 131821 ||||| ||| | || | ||| |||||| || ||||| |||| || | || Sbjct 2352 TTCCAGATAGATGGCGAATGCTCCAGGCCTTT--TGTTGCCGCCCTGATCCACGTACCGT 2295 Query 131822 ACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTC 131881 || | |||||||| ||||||| ||| ||| |||| ||||| | | || || |||| Sbjct 2294 GCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAATACCGTTTGTGCCG 2235 Query 131882 TTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTAT 131941 ||||| | || || || | ||| ||| ||||| || ||||| || ||| | | Sbjct 2234 GAGATGTATGTTCCCTTCGCGCGGATGCAGTGCACGTTCAGCCCAATGCCACCGGCCGAC 2175 Query 131942 TTAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTC 131994 || || || || || |||| | ||||| | || ||||| || | ||| || Sbjct 2174 TTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATACCCTCAATGCTATC 2122 >seq24704 Length=53625 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| || | |||| ||| | ||||| ||||| || || ||||||||| | Sbjct 37703 CCACCGCGCAGACGAAGCACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGAC 37644 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || || ||||| ||||||||| | || |||||||| ||||||||||| Sbjct 37643 AGCGTGCGTCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGG 37584 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| |||| | || | || || | || || || Sbjct 37583 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 37524 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | || ||||| || ||||| || ||||| ||||| Sbjct 37523 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 37477 >seq29242 Length=5648 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||||| || | |||| ||| | || || || || ||||| || ||||| | Sbjct 5416 CCACCGCGCAGACGAAGAACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGAC 5475 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | ||||| ||||| || ||||| | || |||||||| ||||| || || Sbjct 5476 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGG 5535 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199 | ||||| ||||| |||||| || | | || | || || | ||||| |||| Sbjct 5536 ATTCCCTCCTTATCCTGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCT-CAAC 5594 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| || | || || ||||| ||||||||||| || |||||| Sbjct 5595 CTCGAGAGTGATGGTCTTTCCGGTCAGCGTTTTCACAAAAATCTGCATA 5643 >seq734 Length=4884 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | |||| ||| | || || || || || || || ||||| | Sbjct 11 CCACCACGCAGACGAAGGACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGAC 70 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | ||||| ||||| || ||||| | || |||||||| ||||| || || Sbjct 71 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGG 130 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199 | ||||| ||||| |||||| || | | || | || || | ||||| |||| Sbjct 131 ATTCCCTCCTTATCCTGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCT-CAAC 189 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | || || ||||||||||||||||| || |||||| Sbjct 190 CTCGAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACAAAAATCTGCATA 238 >seq9735 Length=15595 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| |||| ||| | || || || || ||||||||||||||| | |||| | Sbjct 4824 CGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGACCA 4765 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || ||||| || ||||| | || |||||||| ||||| || || | || || ||| Sbjct 4764 TCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTA 4705 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| |||| | || | ||||| | | || || || || || || Sbjct 4704 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGATG 4645 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| || || |||||||| || || ||||| Sbjct 4644 GTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 4610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424777122350328