Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5614 93.3 5e-14 >seq5614 Length=18782 Score = 93.3 bits (102), Expect = 5e-14 Identities = 264/398 (66%), Gaps = 6/398 (2%) Strand=Plus/Minus Query 178885 CCCGTGCCGATGCCTTCGGTTCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAAG 178944 || |||||||| || || | ||||| | || | ||| || | | |||| ||| || Sbjct 14899 CCGGTGCCGATACCGTCCGCACCGTTGATCAGCAGCATCGGTATGATCGGCAGATACCAG 14840 Query 178945 TCTGGTTCAAT-CGCACGCCCGTCATCATCCAAATAATTGAGCACGGGGTCGTCCCTCGG 179003 | |||||||| ||| | ||| || | | || | |||| || |||||| ||| Sbjct 14839 ACCGGTTCAATACGCT-GATTGTCCTCGTACTGGTACTCCAGCAGTGGATCGTCCAGCGG 14781 Query 179004 ATCAAAGATTTTACGAG-CATCCCTGGTGAGTTTTGTGAAGATGTACCTCGTTTGAGACG 179062 || |||||| || | || | || || | |||||||||||||| | || || Sbjct 14780 ATGAAAGATGCACCGCGTCAGAGC-GGACAGCATCGTGAAGATGTACCTAGGGCTAG-CG 14723 Query 179063 CA-TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATA 179121 | || || || ||| | | |||||| ||||| ||||| | || | || |||||||| Sbjct 14722 CTGTCCTTTCCGCCCGTTAAACGCGTACCAAACTGACCGCCCGGGTACAGCAGATTGATG 14663 Query 179122 TTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCA 179181 ||||| || | ||| | | |||| |||| ||||| |||||| || Sbjct 14662 TTGTTGCTGCCGACGTAATTCTGCGCCAGATTGATGATCGTCGAACAGAGGGACTGCTCG 14603 Query 179182 CCGTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCATCTCA 179241 ||||||||||| |||||||| |||||||| | | |||| ||| |||||||| | ||| Sbjct 14602 CCGTGATGGTACGCCGACTTTTCCGCCACCGAACCGGCCAGCTGGGCCACCTTAACCTCG 14543 Query 179242 TCCTTGAGGTTCTTGTGGAAGCACGCATACATCACCTT 179279 |||| || | |||||| | | ||| |||||| Sbjct 14542 CGCTTGTCGTCACGCTTGAAGCAAGTAAACAGCACCTT 14505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618200434267640