Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 100 3e-16
seq22281 84.2 3e-11
>seq25975
Length=7706
Score = 100 bits (110), Expect = 3e-16
Identities = 613/972 (63%), Gaps = 21/972 (2%)
Strand=Plus/Plus
Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754
|||||| | |||| |||||| ||||| || ||||| ||||||||| | || |||| ||
Sbjct 2421 CCGCGACATGTTCTACGCTCTGTGGATACCGGATCTGTTCATGAAGCGTGTGGAGGCGAA 2480
Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814
|| | ||| || | |||||| || | || ||||| | ||| | ||||||
Sbjct 2481 TGAAATGTGGAGCCTGATGTGTCCACACGATTGTCCCGGTCTGGCAGATACGTGGGGTGA 2540
Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGAC-GGTGC 104873
||||| || || ||||| ||||||| |||| ||||| | | |||| |||
Sbjct 2541 AGAGTTCGAGAAGCTGTACACGGGGTACGAGAAAGAGGGTCGCTTTATT-CGACAGGTCA 2599
Query 104874 CAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACA 104933
||| || ||||| || || || |||| || || || || ||||||||
Sbjct 2600 AAGCACAGGACTTGTGGTTCGCGATCATCGAGTCGCAGGTGGAAACGGGCGTACCATACA 2659
Query 104934 TGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGA 104993
|||| ||||| || || || || | || |||||||| ||||| | || || ||
Sbjct 2660 TGCTGTACAAGGATGCATGCAATCGTAAAAGTAATCAGCAGAATGTCGGAACCATTAAAT 2719
Query 104994 GTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTA 105053
||||||| || || || ||||| |||| | | | || || || || ||||| |
Sbjct 2720 GTTCCAACCTGTGCACCGAAATTGTGGAGTATTCGTCGAAGGACGAAGTAGCGGTGTGCA 2779
Query 105054 ACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATG 105113
| || || || || ||| | || || ||| | | ||| || || | ||||| |
Sbjct 2780 ATCTGGCCTCGATTGCTTTGAACATGTTTGTAAAGCAAGA---TAAAACGTATGATTTTA 2836
Query 105114 AAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAA 105173
|| || | ||||| | || | || || || || |||| | |||||| |
Sbjct 2837 CCAAGCTGAAGGAAGTCGCTAAGATAGTAACGCGCAATCTGAACAAGATCATTGATGTCA 2896
Query 105174 ATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTC 105230
| | || || || ||| || || || || ||| | ||||| || || |||
Sbjct 2897 ACTACTATCCTGTCCCGGAGGCTAAGCG---CTCCAACATGCGCCACCGACCCATCGGTA 2953
Query 105231 TCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGT-CGCCACGCATTTGATTCCGAC 105289
| ||||||||||| | || |||| |||| |||| | ||| | | | || |||
Sbjct 2954 TAGGTGTTCAGGGAATGGCCGATGCGTTCA-TCTTAATGCGCTATCCGTACGAAAGCGAG 3012
Query 105290 GAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCG 105349
|| || | | | || | ||||| || ||||| ||| || || || || ||
Sbjct 3013 GAGGCTCAAAAGCTGAACCAACAAATATTCGAAACCATCTATTTCGGAGCACTGGAAGCT 3072
Query 105350 AGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA 105409
|| | |||||||| | |||||| || || ||||| | |||||| ||| | |
Sbjct 3073 AGCTGTGAGTTGGCCGCTCGTGATGGACCGTACGAAACGTACGAGGGTAGTCC-GGTGAG 3131
Query 105410 CAAGGG-GTGCTTCAATTTGATATGTGG--GAAGGTG-AGACCAAGCTTCACTACGACTG 105465
||||| | || || | || |||||| |||| | ||| |||| | ||||
Sbjct 3132 TAAGGGCATCCTGCAGTACGAAATGTGGAACAAGGAGCCGACTGAGCT---GTGGAACTG 3188
Query 105466 GGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCC 105525
| | | |||||| || || | ||| | || || || || |||| ||
Sbjct 3189 GTCGGAGTTGAAGGAAAAAATAGCCAAGCACGGTATCCGCAATTCGCTGCTGTTGGCCCC 3248
Query 105526 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 105585
||||| || || || || || ||||| | || || ||||||| || || ||||||||
Sbjct 3249 GATGCCGACGGCTTCGACAGCCCAAATTCTTGGCAACAATGAATCGTTCGAGCCCTACAC 3308
Query 105586 GACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCT 105645
| ||||| | || ||| | || |||| |||||| | | || ||| | |||||
Sbjct 3309 GTCGAACGTATACAATAGACGCGTGCTATCGGGTGAGTTTCAGGTGGTAAACCACCATCT 3368
Query 105646 CGTGGATGACCT 105657
| || | || ||
Sbjct 3369 CCTGCAGGATCT 3380
>seq22281
Length=11977
Score = 84.2 bits (92), Expect = 3e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773
|| ||| | |||||| |||| | ||||| | | ||||| || || ||||| | ||
Sbjct 3304 CTGTTTAATGCCATCGAAACGCTGCCGTGCGTGAAGAAGAAGGCTGACTGGGCGCTAAAC 3245
Query 94774 TGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAG 94833
||| | | ||| | | ||| | |||||| || | || || || || ||
Sbjct 3244 TGGATCTCCAGCAAGAAGGCTAACTTCGGTGAGCGTGTCGTGGCTTTCGCCGCCGTCGAA 3185
Query 94834 GGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATG 94893
|||||||||||| || |||| | |||| |||||||||||||| || || |||
Sbjct 3184 GGTATCTTCTTCAGCGGCAGCTTCGCTTCCATTTTCTGGCTCAAGAAGCGTGGCCTGATG 3125
Query 94894 CCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|| || ||| |||||| |||||||| || || || ||||| || || |||
Sbjct 3124 CCGGGACTCACCTTCTCGAACGAGCTGATTTCGCGCGACGAAGGGCTGCAC 3074
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583039386909560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |