Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq734 192 2e-43
seq29242 188 2e-42
seq9735 178 4e-39
seq24704 150 5e-31
seq14591 91.5 4e-13
seq3525 91.5 4e-13
seq2992 91.5 4e-13
seq23961 89.7 2e-12
seq29760 87.8 5e-12
seq22867 87.8 5e-12
seq11592 87.8 5e-12
seq10005 87.8 5e-12
seq5798 87.8 5e-12
seq3579 87.8 5e-12
seq2936 87.8 5e-12
seq1854 87.8 5e-12
seq1409 87.8 5e-12
>seq734
Length=4884
Score = 192 bits (212), Expect = 2e-43
Identities = 181/231 (78%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || ||||| || || || || || || || ||||| ||
Sbjct 7 CATACCACCACGCAGACGAAGGACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTC 66
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || |||||||| || || ||||| |||||||| ||||| |||||||| ||
Sbjct 67 CGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGG 126
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| ||||| || ||||||||||| || || || ||||| ||||||| ||| ||||| ||
Sbjct 127 TGGGATTCCCTCCTTATCCTGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTC 186
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || || || | ||||||||||| || ||||| ||||||||||||||
Sbjct 187 AACCTCGAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACAAAAATCTGCAT 237
>seq29242
Length=5648
Score = 188 bits (208), Expect = 2e-42
Identities = 169/212 (80%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
||||| ||||| || || || || || ||||| ||||| || || | || || ||||||
Sbjct 5431 AGAACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGACAGGGTGCGGCCATCT 5490
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || ||||| |||||||| ||||| |||||||| || || ||||| || ||||||
Sbjct 5491 TCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCC 5550
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
||||| || || || ||||| ||||||| ||| ||||| ||||| || || || | |||
Sbjct 5551 TGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGAGTGATGGTC 5610
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|||||||| || ||||| ||||||||||||||
Sbjct 5611 TTTCCGGTCAGCGTTTTCACAAAAATCTGCAT 5642
>seq9735
Length=15595
Score = 178 bits (196), Expect = 4e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
||||||||| | || || || |||||||| || || || || |||||||| || || ||
Sbjct 4837 ACCACCACGAAGTCGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGA 4778
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
| || || ||||| || || || || || |||||||| ||||| |||||||| |||||
Sbjct 4777 GAGAGTGCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGG 4718
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
||| ||||| |||||||| || || || || ||||| || |||| || || || || ||
Sbjct 4717 AATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGAC 4658
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|||||||| | ||||| ||||| || ||||| || |||||||||||
Sbjct 4657 CTCAAGTGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCAT 4610
>seq24704
Length=53625
Score = 150 bits (166), Expect = 5e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569
|||||| || | | || || |||||||| ||||||||||| || || || || || ||
Sbjct 37704 ACCACCGCGCAGACGAAGCACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGA 37645
Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629
| || || ||||| || || || || || || ||||| ||||| |||||||| || ||
Sbjct 37644 CAGCGTGCGTCCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGG 37585
Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689
||||| || || ||||| || || || || ||||| || |||| ||| || || || ||
Sbjct 37584 GATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGAC 37525
Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| |||| ||||| || || || ||||| || || ||||||||
Sbjct 37524 CTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 37477
>seq14591
Length=1802
Score = 91.5 bits (100), Expect = 4e-13
Identities = 67/78 (86%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 1211 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 1270
Query 235950 CCCAGCATCTCCATACAA 235967
||| ||||||||| ||||
Sbjct 1271 CCCGGCATCTCCAAACAA 1288
>seq3525
Length=23163
Score = 91.5 bits (100), Expect = 4e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 10240 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 10181
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 10180 CCCGGCATCTCCA 10168
>seq2992
Length=4089
Score = 91.5 bits (100), Expect = 4e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||||||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 2021 GGGGATGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 1962
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 1961 CCCGGCATCTCCA 1949
>seq23961
Length=29773
Score = 89.7 bits (98), Expect = 2e-12
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 14513 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 14454
Query 235950 CCCAGCATCTCCATACA 235966
||| ||||||||| |||
Sbjct 14453 CCCGGCATCTCCAAACA 14437
>seq29760
Length=21879
Score = 87.8 bits (96), Expect = 5e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 6507 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 6448
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 6447 CCCGGCATCTCCA 6435
>seq22867
Length=15136
Score = 87.8 bits (96), Expect = 5e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 8232 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 8173
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 8172 CCCGGCATCTCCA 8160
>seq11592
Length=14967
Score = 87.8 bits (96), Expect = 5e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| ||| ||||||| ||||||||| ||||| ||||||||| |||||| | |
Sbjct 9182 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACTGGGATCGATA 9241
Query 235950 CCCAGCATCTCCA 235962
|||||||||||||
Sbjct 9242 CCCAGCATCTCCA 9254
>seq10005
Length=2564
Score = 87.8 bits (96), Expect = 5e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 1792 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 1733
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 1732 CCCGGCATCTCCA 1720
>seq5798
Length=3420
Score = 87.8 bits (96), Expect = 5e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 2811 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 2870
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 2871 CCCGGCATCTCCA 2883
>seq3579
Length=3923
Score = 87.8 bits (96), Expect = 5e-12
Identities = 68/81 (84%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 2438 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 2497
Query 235950 CCCAGCATCTCCATACAATGA 235970
||| ||||||||| | ||||
Sbjct 2498 CCCGGCATCTCCAAAGTATGA 2518
>seq2936
Length=19121
Score = 87.8 bits (96), Expect = 5e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 14704 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 14763
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 14764 CCCGGCATCTCCA 14776
>seq1854
Length=4487
Score = 87.8 bits (96), Expect = 5e-12
Identities = 70/83 (84%), Gaps = 1/83 (1%)
Strand=Plus/Minus
Query 235880 TTCAATATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACC 235939
||||| |||||| ||||| ||| ||||||| ||||||||| ||||| ||||||||||
Sbjct 2524 TTCAACCGAGGGGG-TGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACC 2466
Query 235940 GGGATCAAAACCCAGCATCTCCA 235962
|||||| | |||| |||||||||
Sbjct 2465 GGGATCGATACCCGGCATCTCCA 2443
>seq1409
Length=4663
Score = 87.8 bits (96), Expect = 5e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 235890 GGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAAA 235949
|||| ||||| ||| ||||||| ||||||||| ||||| |||||||||||||||| | |
Sbjct 1915 GGGGGTGTAGCTCAGATGGTAGAGCGCTCGCTTAGCATGTGAGAGGTACCGGGATCGATA 1856
Query 235950 CCCAGCATCTCCA 235962
||| |||||||||
Sbjct 1855 CCCGGCATCTCCA 1843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1514664810251307
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |