Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 192 6e-44
seq22281 107 2e-18
>seq25975
Length=7706
Score = 192 bits (212), Expect = 6e-44
Identities = 674/1036 (65%), Gaps = 25/1036 (2%)
Strand=Plus/Minus
Query 78865 ATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTG--- 78921
||||| ||||||||| ||||| || || ||| |||| ||||||||||||||||||
Sbjct 2984 ATGAACGCATCGGCCATTCCCTGAACACCTATACCGATGGGTCGGTGGCGCATGTTGGAG 2925
Query 78922 CTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGC 78981
| ||| ||| || | || || |||| ||| |||| |||||| || |||
Sbjct 2924 CGCTTA---GCCTCCGGGACAGGATAGTAGTTGACATCAATGATCTTGTTCAGATTGCGC 2868
Query 78982 GTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGATTTCCTTTGATG--- 79038
|| || | | || || || | || |||| |||||| | | ||| ||| |
Sbjct 2867 GTTACTATCTTAGCGACTTCCTTCAGCTTGGTAAAATCATAC-GTTTTATCTTGCTTTAC 2809
Query 79039 AAAGTCGGT--AGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAA 79096
||| | | | ||| | ||| ||||| |||||||| || |||||| |||
Sbjct 2808 AAACATGTTCAAAGCA-ATCGAGGCCAGATTGCACACCGCTACTTCGTCCTTCGACGAAT 2750
Query 79097 CCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGC 79156
||| | ||||| ||||||| || || | || ||||| |||| |||| ||| || |
Sbjct 2749 ACTCCACAATTTCGGTGCACAGGTTGGAACATTTAATGGTTCCGACATTCTGCTGATTAC 2690
Query 79157 TCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCT 79216
| || || || || |||||||| |||||| || || || || ||||| ||
Sbjct 2689 TTTTACGATTGCATGCATCCTTGTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACT 2630
Query 79217 TGA-GAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTAC--CGACCCTGTG 79273
|| || ||| | ||| | |||| | || ||| | || || ||||||| |
Sbjct 2629 CGATGATCGC-GAACCACAAGTCCTGTGCTTTGAC--CTGTCGAATAAAGCGACCCTCTT 2573
Query 79274 CGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGC 79333
||||| | ||||| || | ||| | || || | ||| | ||| || || |
Sbjct 2572 TCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCACCCCACGTATCTGCCAGACCGGGAC 2513
Query 79334 ACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGT 79393
| ||||| || ||||||||| ||| || | | ||| || || |||||| || |
Sbjct 2512 AATCGTGTGGACACATCAGGCTCCACATTTCATTCGCCTCCACACGCTTCATGAACAGAT 2453
Query 79394 CCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCA 79453
|||| |||||||| || ||| | ||||||| ||| | ||| || | ||| |||
Sbjct 2452 CCGGTATCCACAGAGCGTAGAACATGTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTT 2393
Query 79454 GACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACG 79513
|| |||||||| || | | || | |||||||| ||||||||||||||||| |
Sbjct 2392 TCTTTAGATCGAGAAACTCGAATACATCACCATGCCACGGTTCCAGATAGATGGCGAATG 2333
Query 79514 AACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGA 79573
|| | ||| ||||||||| | |||||||| ||||| |||||| | || || |
Sbjct 2332 CTCCAGGCCTTTTGTTGCCGCCCTGATCCACGTACCGTGCCGTATTGTTGTACACGCGCA 2273
Query 79574 GCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCC 79633
|||| ||||| | |||| | | ||||| || ||| ||| ||| || |||| |
Sbjct 2272 GCATCGGCACCAATCCGTTTGAAATACCGTTTGTGCCGGAGATGTATGTTCCCTTCGCGC 2213
Query 79634 GAATGTTCGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCC 79692
| ||| | ||| || | || ||||| |||| | |||| || || |||| || | |
Sbjct 2212 GGATG-CAGTGCACGTTCAGCCCAATGCCACCGGCCGACTTTGAAATCAGCGCACATTGC 2154
Query 79693 TTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTC 79752
|| || || ||||| || ||||| || || || ||| | | ||| || |||
Sbjct 2153 TTCAGAGTATCGTAAATACCCTCAATGCTATCATCAGACATGGTCAGCAGAAAACAGGAA 2094
Query 79753 GACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAAC 79812
|| | ||| || | |||| | || || | |||||| | ||||| || ||| |
Sbjct 2093 GAGAGCTGAGGCCGCTGCGTAGCCGCTGCAAACATGGTCGGTGAGGCGTGGGTAAAGTAG 2034
Query 79813 TTTTGGCTCATCAGATCGTACGTCTCCTTGACGC-GC-GGGAGGTCGTCGCCGTGGATGC 79870
|| || ||||| ||||| || | ||| || || || || ||||||||||
Sbjct 2033 CGTTCAGACAGCAGATTATACGTTTCGAT--CGCTGCATCGATGTTTTCACCGTGGATGC 1976
Query 79871 CGACCGCGACGCGCAT 79886
||| |||||||||||
Sbjct 1975 CGATAGCGACGCGCAT 1960
Score = 138 bits (152), Expect = 1e-27
Identities = 1011/1599 (63%), Gaps = 64/1599 (4%)
Strand=Plus/Plus
Query 19255 CTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGA 19314
|||||| || || | ||| ||||| ||||||||||| || ||||| || || ||| |
Sbjct 2097 CTGTTTTCTGCTGACCATGTCTGATGATAGCATTGAGGGTATTTACGATACTCTGAAGCA 2156
Query 19315 GTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC-TGCTCGAATATCCGGT 19373
|| |||| || || |||| | |||| || || ||| | || ||| | |||||
Sbjct 2157 ATGTGCGCTGATTTCAAAGTCGGCCGGTGGCATTGGGCTGAACGTGCACTGC-ATCCGCG 2215
Query 19374 CGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCC 19433
||| || ||| ||| || || ||||| | | |||| | || || ||||| |
Sbjct 2216 CGAAGGGAACATACATCTCCGGCACAAACGGTATTTCAAACGGATTGGTGCCGATGCTGC 2275
Query 19434 GCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGT 19493
|||| | |||||| ||||| ||||||| | ||||| ||| |||| | || | |
Sbjct 2276 GCGTGTACAACAATACGGCACGGTACGTGGATCAGGGCGGCAACAAAAGGCCTGGAGCAT 2335
Query 19494 TCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGA 19553
|||||||||| || || || ||||| | || || | || || ||||| || |
Sbjct 2336 TCGCCATCTATCTGGAACCGTGGCATGGTGATGTATTCGAGTTTCTCGATCTAAAGAAAA 2395
Query 19554 ACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACC 19613
|| || | || ||| | || |||||| | ||| || ||||||| ||||| |
Sbjct 2396 ACACTGGCAAGGAAGAGGTCCGTGCCCGCGACATGTTCTACGCTCTGTGGATACCGGATC 2455
Query 19614 TATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCC 19673
| |||||| || || ||| | | ||| ||| ||||||||| || ||||| || |
Sbjct 2456 TGTTCATGAAGCGTGTGGAGGCGAATGAAATGTGGAGCCTGATGTGTCCACACGATTGTC 2515
Query 19674 CTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCC 19733
| || || | || | || || | |||| | || ||||| | ||||
Sbjct 2516 CCGGTCTGGCAGATACGTGGGGTGAAGAGTTCGAGAAGCTGTACACGGGGTACGAGAAAG 2575
Query 19734 AGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGGGACCGCG-TCCTCAAAAGC 19792
|||| || || | |||| || | |||| | | || |||| || || |
Sbjct 2576 AGGGTCGCTTTATTCGACAGGTCAAAGCACAGGACTTGT-GGTTCGCGATCATCGAGTCG 2634
Query 19793 CAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGC-CGCGAACG-CCAAGTCAA 19850
||||| || || ||| ||| |||||| |||||||| || || | || |||| |
Sbjct 2635 CAGGTGGAAACGGGCGTACCATACATGCTGTACAAGGATGCATGCAATCGTAAAAGT--A 2692
Query 19851 ATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTT 19910
||||| |||| |||| | || || | ||||||||||| || ||||| ||||| ||
Sbjct 2693 ATCAGCAGAATGTCGGAACCATTAAATGTTCCAACCTGTGCACCGAAATTGTGGAGTATT 2752
Query 19911 CCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTGC-CTGCCGACTTTCGTC 19969
| | |||||| || ||||| |||||||| || | ||| || | || ||
Sbjct 2753 CGTCGAAGGACGAAGTAGCGGTGTGCAATCTGGCCTCGAT-TGCTTTGAACATGTTTGTA 2811
Query 19970 AAG---GCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGT 20026
||| | | | || ||| |||| || | || || | | | || |||||
Sbjct 2812 AAGCAAGATAAAACGTATGATTTTACCAAGCTGAAGGAAGTCGCTAAGATAGTAACGCGC 2871
Query 20027 AATCTGAATCGCGTCATCGATCGGAACTTTTA-CCCGACC--GAGGCGGCGCGCAAGTCG 20083
|||||||| |||| ||| |||| || || | || ||||| |||| ||
Sbjct 2872 AATCTGAACAAGATCATTGATGTCAACTACTATCCTGTCCCGGAGGCTAAGCGC---TCC 2928
Query 20084 AATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATG 20143
|| ||||||||||| || |||| || || || ||||| ||||||| | ||||| |
Sbjct 2929 AACATGCGCCACCGACCCATCGGTATAGGTGTTCAGGGAATGGCCGATGCGTTCATCTTA 2988
Query 20144 CTCGGCCTCTCATTCGACGATCCCA--AGGCGCGCGAGCTCAACAAGGGCATCTTCGAGG 20201
| || | | ||| | | | |||| | |||| ||| | || |||||
Sbjct 2989 ATGCGCTATCCGTACGA--AAGCGAGGAGGCTCAAAAGCTGAACCAACAAATATTCGAAA 3046
Query 20202 CCGTGTACCACGCGGCCCTCCTGGAATC---GTGCGAACTCGCCAAAGAGGACGGCCCGT 20258
|| | || || || |||||| | || || | ||| || || ||||
Sbjct 3047 CCATCTATTTCGGAGC---ACTGGAAGCTAGCTGTGAGTTGGCCGCTCGTGATGGACCGT 3103
Query 20259 ACGAGACGTTCAAGGGGTCGCCCGCGTCCG--AGGGTATCCTCCAGCCGGACATGTGGGG 20316
|||| |||| | | |||| | ||| || | |||| ||||| ||| || ||||||
Sbjct 3104 ACGAAACGTACGA-GGGTAGTCCG-GTGAGTAAGGGCATCCTGCAGTACGAAATGTGG-- 3159
Query 20317 CGTCACTGA---GAATGAGTTTTGGAGC------GCCCTCAAGGTTGAGAT---CAAGAC 20364
|| || || |||| | |||| | | | |||| | || ||||
Sbjct 3160 -AACAAGGAGCCGACTGAGCTGTGGAACTGGTCGGAGTTGAAGGAAAAAATAGCCAAG-- 3216
Query 20365 CCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGAT 20424
||||| | ||||| ||| |||| | || || |||||||| || ||||| ||||| ||
Sbjct 3217 -CACGGTATCCGCAATTCGCTGCTGTTGGCCCCGATGCCGACGGCTTCGACAGCCCAAAT 3275
Query 20425 CATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTTGCGTCGTACACT 20484
| || ||||| || | |||||||| |||||| | ||| | ||| | || ||
Sbjct 3276 TCTTGGCAACAATGAATCGTTCGAGCCCTACACGTCGAACGTATACAATAGACGCGTGCT 3335
Query 20485 GGCCGGTGAGTTCGTCA--TGGTAAACAAGCACCTGGTCCGCGACTTGCAGAAGATCGAT 20542
| |||||||| ||| |||||||| | || || | | || || || || |
Sbjct 3336 ATCGGGTGAGTT--TCAGGTGGTAAACCACCATCTCCTGCAGGATCTGACCAACATGGGA 3393
Query 20543 ATGTGGTCGCCCAAAATTAAGAATGAAATTGT-CCGAGCCGGCGGGAGC--GTCCAGGCA 20599
| ||| | | | || ||||| || ||| | ||| | ||| | || | |
Sbjct 3394 TTATGGGATCTCGATATGAAGAACGAGATTCTGTCGAAC--AATGGATCAATTCAAAAGA 3451
Query 20600 TTG-GA-TATCCC-CCAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAG 20656
||| || |||||| | |||| || || |||||| || |||||||| ||| || |
Sbjct 3452 TTGAGACTATCCCGCAAGAAATTC-GCGATCTTTACAAAACGGTATGGGAGATCTCAGTG 3510
Query 20657 AAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTC 20716
|| | |||| | ||||| || |||||||| || | ||||| ||||| || ||| ||
Sbjct 3511 AAAACGTGCATCAAAATGGCAGCGGATCGCGGTGCGTTTATCGATCAGTCGCAATCGTTC 3570
Query 20717 AATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGG 20776
||| | | | | | | || | | | ||||||| || || ||| | ||||| |||
Sbjct 3571 AATATTCACGTCGCGGAACCCAACTACGGTAAGCTGACGTCGATCCATTTCTACGGGTGG 3630
Query 20777 CACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGACC 20815
| | ||| | || || |||||||| ||| |||| |||
Sbjct 3631 AAAATGGGTTTGAAAACTGGCATGTATTATTTGCGCACC 3669
>seq22281
Length=11977
Score = 107 bits (118), Expect = 2e-18
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 59982 CGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATT 60041
||| || | ||||| || ||| ||||| ||||||||| ||| ||| | | |||
Sbjct 3211 CGTGTCGTGGCTTTCGCCGCCGTCGAAGGTATCTTCTTCAGCGGCAGCTTCGCTTCCATT 3152
Query 60042 TTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCC 60101
||||||||||| ||||||||||| |||||||| || | ||||| ||||||||||||||
Sbjct 3151 TTCTGGCTCAAGAAGCGTGGCCTGATGCCGGGACTCACCTTCTCGAACGAGCTGATTTCG 3092
Query 60102 CGGGACGAGGGCCTCCA 60118
|| ||||| || || ||
Sbjct 3091 CGCGACGAAGGGCTGCA 3075
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548316573129360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |