Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq25975 192 6e-44 seq22281 107 2e-18 >seq25975 Length=7706 Score = 192 bits (212), Expect = 6e-44 Identities = 674/1036 (65%), Gaps = 25/1036 (2%) Strand=Plus/Minus Query 78865 ATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTG--- 78921 ||||| ||||||||| ||||| || || ||| |||| |||||||||||||||||| Sbjct 2984 ATGAACGCATCGGCCATTCCCTGAACACCTATACCGATGGGTCGGTGGCGCATGTTGGAG 2925 Query 78922 CTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGC 78981 | ||| ||| || | || || |||| ||| |||| |||||| || ||| Sbjct 2924 CGCTTA---GCCTCCGGGACAGGATAGTAGTTGACATCAATGATCTTGTTCAGATTGCGC 2868 Query 78982 GTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGATTTCCTTTGATG--- 79038 || || | | || || || | || |||| |||||| | | ||| ||| | Sbjct 2867 GTTACTATCTTAGCGACTTCCTTCAGCTTGGTAAAATCATAC-GTTTTATCTTGCTTTAC 2809 Query 79039 AAAGTCGGT--AGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAA 79096 ||| | | | ||| | ||| ||||| |||||||| || |||||| ||| Sbjct 2808 AAACATGTTCAAAGCA-ATCGAGGCCAGATTGCACACCGCTACTTCGTCCTTCGACGAAT 2750 Query 79097 CCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGC 79156 ||| | ||||| ||||||| || || | || ||||| |||| |||| ||| || | Sbjct 2749 ACTCCACAATTTCGGTGCACAGGTTGGAACATTTAATGGTTCCGACATTCTGCTGATTAC 2690 Query 79157 TCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCT 79216 | || || || || |||||||| |||||| || || || || ||||| || Sbjct 2689 TTTTACGATTGCATGCATCCTTGTACAGCATGTATGGTACGCCCGTTTCCACCTGCGACT 2630 Query 79217 TGA-GAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTAC--CGACCCTGTG 79273 || || ||| | ||| | |||| | || ||| | || || ||||||| | Sbjct 2629 CGATGATCGC-GAACCACAAGTCCTGTGCTTTGAC--CTGTCGAATAAAGCGACCCTCTT 2573 Query 79274 CGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGC 79333 ||||| | ||||| || | ||| | || || | ||| | ||| || || | Sbjct 2572 TCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCACCCCACGTATCTGCCAGACCGGGAC 2513 Query 79334 ACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGT 79393 | ||||| || ||||||||| ||| || | | ||| || || |||||| || | Sbjct 2512 AATCGTGTGGACACATCAGGCTCCACATTTCATTCGCCTCCACACGCTTCATGAACAGAT 2453 Query 79394 CCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCA 79453 |||| |||||||| || ||| | ||||||| ||| | ||| || | ||| ||| Sbjct 2452 CCGGTATCCACAGAGCGTAGAACATGTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTT 2393 Query 79454 GACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACG 79513 || |||||||| || | | || | |||||||| ||||||||||||||||| | Sbjct 2392 TCTTTAGATCGAGAAACTCGAATACATCACCATGCCACGGTTCCAGATAGATGGCGAATG 2333 Query 79514 AACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGA 79573 || | ||| ||||||||| | |||||||| ||||| |||||| | || || | Sbjct 2332 CTCCAGGCCTTTTGTTGCCGCCCTGATCCACGTACCGTGCCGTATTGTTGTACACGCGCA 2273 Query 79574 GCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCC 79633 |||| ||||| | |||| | | ||||| || ||| ||| ||| || |||| | Sbjct 2272 GCATCGGCACCAATCCGTTTGAAATACCGTTTGTGCCGGAGATGTATGTTCCCTTCGCGC 2213 Query 79634 GAATGTTCGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCC 79692 | ||| | ||| || | || ||||| |||| | |||| || || |||| || | | Sbjct 2212 GGATG-CAGTGCACGTTCAGCCCAATGCCACCGGCCGACTTTGAAATCAGCGCACATTGC 2154 Query 79693 TTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTC 79752 || || || ||||| || ||||| || || || ||| | | ||| || ||| Sbjct 2153 TTCAGAGTATCGTAAATACCCTCAATGCTATCATCAGACATGGTCAGCAGAAAACAGGAA 2094 Query 79753 GACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAAC 79812 || | ||| || | |||| | || || | |||||| | ||||| || ||| | Sbjct 2093 GAGAGCTGAGGCCGCTGCGTAGCCGCTGCAAACATGGTCGGTGAGGCGTGGGTAAAGTAG 2034 Query 79813 TTTTGGCTCATCAGATCGTACGTCTCCTTGACGC-GC-GGGAGGTCGTCGCCGTGGATGC 79870 || || ||||| ||||| || | ||| || || || || |||||||||| Sbjct 2033 CGTTCAGACAGCAGATTATACGTTTCGAT--CGCTGCATCGATGTTTTCACCGTGGATGC 1976 Query 79871 CGACCGCGACGCGCAT 79886 ||| ||||||||||| Sbjct 1975 CGATAGCGACGCGCAT 1960 Score = 138 bits (152), Expect = 1e-27 Identities = 1011/1599 (63%), Gaps = 64/1599 (4%) Strand=Plus/Plus Query 19255 CTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGA 19314 |||||| || || | ||| ||||| ||||||||||| || ||||| || || ||| | Sbjct 2097 CTGTTTTCTGCTGACCATGTCTGATGATAGCATTGAGGGTATTTACGATACTCTGAAGCA 2156 Query 19315 GTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC-TGCTCGAATATCCGGT 19373 || |||| || || |||| | |||| || || ||| | || ||| | ||||| Sbjct 2157 ATGTGCGCTGATTTCAAAGTCGGCCGGTGGCATTGGGCTGAACGTGCACTGC-ATCCGCG 2215 Query 19374 CGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCC 19433 ||| || ||| ||| || || ||||| | | |||| | || || ||||| | Sbjct 2216 CGAAGGGAACATACATCTCCGGCACAAACGGTATTTCAAACGGATTGGTGCCGATGCTGC 2275 Query 19434 GCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGT 19493 |||| | |||||| ||||| ||||||| | ||||| ||| |||| | || | | Sbjct 2276 GCGTGTACAACAATACGGCACGGTACGTGGATCAGGGCGGCAACAAAAGGCCTGGAGCAT 2335 Query 19494 TCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGA 19553 |||||||||| || || || ||||| | || || | || || ||||| || | Sbjct 2336 TCGCCATCTATCTGGAACCGTGGCATGGTGATGTATTCGAGTTTCTCGATCTAAAGAAAA 2395 Query 19554 ACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACC 19613 || || | || ||| | || |||||| | ||| || ||||||| ||||| | Sbjct 2396 ACACTGGCAAGGAAGAGGTCCGTGCCCGCGACATGTTCTACGCTCTGTGGATACCGGATC 2455 Query 19614 TATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCC 19673 | |||||| || || ||| | | ||| ||| ||||||||| || ||||| || | Sbjct 2456 TGTTCATGAAGCGTGTGGAGGCGAATGAAATGTGGAGCCTGATGTGTCCACACGATTGTC 2515 Query 19674 CTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCC 19733 | || || | || | || || | |||| | || ||||| | |||| Sbjct 2516 CCGGTCTGGCAGATACGTGGGGTGAAGAGTTCGAGAAGCTGTACACGGGGTACGAGAAAG 2575 Query 19734 AGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGGGACCGCG-TCCTCAAAAGC 19792 |||| || || | |||| || | |||| | | || |||| || || | Sbjct 2576 AGGGTCGCTTTATTCGACAGGTCAAAGCACAGGACTTGT-GGTTCGCGATCATCGAGTCG 2634 Query 19793 CAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGC-CGCGAACG-CCAAGTCAA 19850 ||||| || || ||| ||| |||||| |||||||| || || | || |||| | Sbjct 2635 CAGGTGGAAACGGGCGTACCATACATGCTGTACAAGGATGCATGCAATCGTAAAAGT--A 2692 Query 19851 ATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTT 19910 ||||| |||| |||| | || || | ||||||||||| || ||||| ||||| || Sbjct 2693 ATCAGCAGAATGTCGGAACCATTAAATGTTCCAACCTGTGCACCGAAATTGTGGAGTATT 2752 Query 19911 CCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTGC-CTGCCGACTTTCGTC 19969 | | |||||| || ||||| |||||||| || | ||| || | || || Sbjct 2753 CGTCGAAGGACGAAGTAGCGGTGTGCAATCTGGCCTCGAT-TGCTTTGAACATGTTTGTA 2811 Query 19970 AAG---GCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGT 20026 ||| | | | || ||| |||| || | || || | | | || ||||| Sbjct 2812 AAGCAAGATAAAACGTATGATTTTACCAAGCTGAAGGAAGTCGCTAAGATAGTAACGCGC 2871 Query 20027 AATCTGAATCGCGTCATCGATCGGAACTTTTA-CCCGACC--GAGGCGGCGCGCAAGTCG 20083 |||||||| |||| ||| |||| || || | || ||||| |||| || Sbjct 2872 AATCTGAACAAGATCATTGATGTCAACTACTATCCTGTCCCGGAGGCTAAGCGC---TCC 2928 Query 20084 AATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATG 20143 || ||||||||||| || |||| || || || ||||| ||||||| | ||||| | Sbjct 2929 AACATGCGCCACCGACCCATCGGTATAGGTGTTCAGGGAATGGCCGATGCGTTCATCTTA 2988 Query 20144 CTCGGCCTCTCATTCGACGATCCCA--AGGCGCGCGAGCTCAACAAGGGCATCTTCGAGG 20201 | || | | ||| | | | |||| | |||| ||| | || ||||| Sbjct 2989 ATGCGCTATCCGTACGA--AAGCGAGGAGGCTCAAAAGCTGAACCAACAAATATTCGAAA 3046 Query 20202 CCGTGTACCACGCGGCCCTCCTGGAATC---GTGCGAACTCGCCAAAGAGGACGGCCCGT 20258 || | || || || |||||| | || || | ||| || || |||| Sbjct 3047 CCATCTATTTCGGAGC---ACTGGAAGCTAGCTGTGAGTTGGCCGCTCGTGATGGACCGT 3103 Query 20259 ACGAGACGTTCAAGGGGTCGCCCGCGTCCG--AGGGTATCCTCCAGCCGGACATGTGGGG 20316 |||| |||| | | |||| | ||| || | |||| ||||| ||| || |||||| Sbjct 3104 ACGAAACGTACGA-GGGTAGTCCG-GTGAGTAAGGGCATCCTGCAGTACGAAATGTGG-- 3159 Query 20317 CGTCACTGA---GAATGAGTTTTGGAGC------GCCCTCAAGGTTGAGAT---CAAGAC 20364 || || || |||| | |||| | | | |||| | || |||| Sbjct 3160 -AACAAGGAGCCGACTGAGCTGTGGAACTGGTCGGAGTTGAAGGAAAAAATAGCCAAG-- 3216 Query 20365 CCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGAT 20424 ||||| | ||||| ||| |||| | || || |||||||| || ||||| ||||| || Sbjct 3217 -CACGGTATCCGCAATTCGCTGCTGTTGGCCCCGATGCCGACGGCTTCGACAGCCCAAAT 3275 Query 20425 CATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTTGCGTCGTACACT 20484 | || ||||| || | |||||||| |||||| | ||| | ||| | || || Sbjct 3276 TCTTGGCAACAATGAATCGTTCGAGCCCTACACGTCGAACGTATACAATAGACGCGTGCT 3335 Query 20485 GGCCGGTGAGTTCGTCA--TGGTAAACAAGCACCTGGTCCGCGACTTGCAGAAGATCGAT 20542 | |||||||| ||| |||||||| | || || | | || || || || | Sbjct 3336 ATCGGGTGAGTT--TCAGGTGGTAAACCACCATCTCCTGCAGGATCTGACCAACATGGGA 3393 Query 20543 ATGTGGTCGCCCAAAATTAAGAATGAAATTGT-CCGAGCCGGCGGGAGC--GTCCAGGCA 20599 | ||| | | | || ||||| || ||| | ||| | ||| | || | | Sbjct 3394 TTATGGGATCTCGATATGAAGAACGAGATTCTGTCGAAC--AATGGATCAATTCAAAAGA 3451 Query 20600 TTG-GA-TATCCC-CCAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAG 20656 ||| || |||||| | |||| || || |||||| || |||||||| ||| || | Sbjct 3452 TTGAGACTATCCCGCAAGAAATTC-GCGATCTTTACAAAACGGTATGGGAGATCTCAGTG 3510 Query 20657 AAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTC 20716 || | |||| | ||||| || |||||||| || | ||||| ||||| || ||| || Sbjct 3511 AAAACGTGCATCAAAATGGCAGCGGATCGCGGTGCGTTTATCGATCAGTCGCAATCGTTC 3570 Query 20717 AATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGG 20776 ||| | | | | | | || | | | ||||||| || || ||| | ||||| ||| Sbjct 3571 AATATTCACGTCGCGGAACCCAACTACGGTAAGCTGACGTCGATCCATTTCTACGGGTGG 3630 Query 20777 CACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGACC 20815 | | ||| | || || |||||||| ||| |||| ||| Sbjct 3631 AAAATGGGTTTGAAAACTGGCATGTATTATTTGCGCACC 3669 >seq22281 Length=11977 Score = 107 bits (118), Expect = 2e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 59982 CGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATT 60041 ||| || | ||||| || ||| ||||| ||||||||| ||| ||| | | ||| Sbjct 3211 CGTGTCGTGGCTTTCGCCGCCGTCGAAGGTATCTTCTTCAGCGGCAGCTTCGCTTCCATT 3152 Query 60042 TTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCC 60101 ||||||||||| ||||||||||| |||||||| || | ||||| |||||||||||||| Sbjct 3151 TTCTGGCTCAAGAAGCGTGGCCTGATGCCGGGACTCACCTTCTCGAACGAGCTGATTTCG 3092 Query 60102 CGGGACGAGGGCCTCCA 60118 || ||||| || || || Sbjct 3091 CGCGACGAAGGGCTGCA 3075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548316573129360