Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq29242 190 2e-43 seq734 185 1e-41 seq9735 179 4e-40 seq24704 167 3e-36 seq25975 154 2e-32 seq3879 134 2e-26 seq28971 116 4e-21 seq22281 102 9e-17 >seq29242 Length=5648 Score = 190 bits (210), Expect = 2e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || ||||| ||||| ||||| || ||||| ||||||||| || Sbjct 5642 ATGCAGATTTTTGTGAAAACGCTGACCGGAAAGACCATCACTCTCGAGGTTGAGCCATCC 5583 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | ||||| || |||||||| ||||||||||| || ||||| ||| Sbjct 5582 GATACGATTGAGAATGTCAAGGCCAAGATTCAGGATAAGGAGGGAATCCCACCAGATCAG 5523 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || ||||| || || |||| || ||||| | |||||||| Sbjct 5522 CAGCGTCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCGGACTATAAC 5463 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || ||||||||||| || ||||| || | ||||| ||||||||| Sbjct 5462 ATTCAGAAGGAATCCACCCTCCATCTGGTTCTTCGTCTGCGCGGTGGA 5415 >seq734 Length=4884 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || || || ||||| ||||| || || || ||||||||| || Sbjct 237 ATGCAGATTTTTGTGAAAACTCTGACCGGAAAGACCATCACCCTCGAGGTTGAGCCATCC 178 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | ||||| || |||||||| ||||||||||| || ||||| ||| Sbjct 177 GATACGATTGAGAATGTCAAGGCCAAGATTCAGGATAAGGAGGGAATCCCACCAGATCAG 118 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || ||||| || || |||| || ||||| | |||||||| Sbjct 117 CAGCGTCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCGGACTATAAC 58 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||||||||| || ||||| ||| | ||||| || ||||| Sbjct 57 ATCCAGAAGGAATCCACCCTCCATCTGGTCCTTCGTCTGCGTGGTGG 11 >seq9735 Length=15595 Score = 179 bits (198), Expect = 4e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || ||||| ||||||||||| || || |||||||| ||| | Sbjct 4610 ATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTTGAGGTCGAGCCTTCG 4669 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||||| || || ||||| ||||| || ||||||||||| ||| Sbjct 4670 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCAGATCAG 4729 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || ||||| || ||||||| ||| || || | ||||| ||| Sbjct 4730 CAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTACAAT 4789 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| || |||||||| ||| |||| ||||| ||||| Sbjct 4790 ATTCAGAAGGAATCGACCCTTCATCTGGTCCTGCGACTTCGTGGTGG 4836 >seq24704 Length=53625 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||| || || || || ||||| ||||| |||||||| ||| | Sbjct 37477 ATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCCTCG 37536 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| ||||||| || || ||||||||||||||||| || || || ||| Sbjct 37537 GATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCGGATCAG 37596 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || |||||||| || ||||||| || || || | ||||| || Sbjct 37597 CAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGATGGACGCACGCTGTCCGACTACAAC 37656 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || || || |||||||| || | ||||| |||||||| Sbjct 37657 ATCCAGAAAGAGTCTACCCTTCATCTGGTGCTTCGTCTGCGCGGTGG 37703 >seq25975 Length=7706 Score = 154 bits (170), Expect = 2e-32 Identities = 886/1390 (64%), Gaps = 61/1390 (4%) Strand=Plus/Minus Query 80395 GTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATC 80454 ||||| ||||| || | || ||||| || || || || || || |||||||||||| Sbjct 3308 GTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAGCCGTCGGCATC 3249 Query 80455 GGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGAC 80514 ||| | | || ||| ||||| || | |||||||| || | || ||| || ||| Sbjct 3248 GGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCCTTCAACTCCGAC 3189 Query 80515 CAAAAATCAACCCCAACGCTGTGACC-----CCACATGTCGTGCTGCAAGATGCCCTCCG 80569 || || || | | | || |||||| |||| ||||| |||||||| Sbjct 3188 CAGT--TCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCAGGATGCCCTTAC 3131 Query 80570 ACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACA-CGA- 80627 | ||||| ||| || |||| |||||||| || || ||||| |||||| | | Sbjct 3130 TCACCGGACTACCCTCGTACGTTTCGTACGGTCCATCACGAGCGGCCAACTCACAGCTAG 3071 Query 80628 CTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTG 80687 || | || || || ||| ||| || || | | ||||| | |||| Sbjct 3070 CTTCC--AGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGCTTTTGAGCCTC 3013 Query 80688 TGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGAT 80747 | ||| ||| ||| ||| | |||||| | || |||| |||||||| || || Sbjct 3012 CTCGCTTTCGTACGGATAGCGCATTAAGATGAACGCATCGGCCATTCCCTGAACACCTAT 2953 Query 80748 GGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATT 80807 |||| || ||||||||| |||| || |||| |||||||| | || || |||| Sbjct 2952 ACCGATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACAGGATAGTAGTTGAC 2893 Query 80808 ATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAA 80867 ||| |||| |||||| ||||| || || | | | || || | || || ||| Sbjct 2892 ATCAATGATCTTGTTCAGATTGCGCGTTACTATCTTAGCGACTTCCTTCAGCTTGGTAAA 2833 Query 80868 GTCGAATTGGTTCCC---CTTCACAAA--TGCCGGAAGGCTCAGGGACGCCAGATTGCAC 80922 || | || | ||| ||||| || ||| | || |||||||||||| Sbjct 2832 ATCATACGTTTTATCTTGCTTTACAAACATGTTCAAAGCA--ATCGAGGCCAGATTGCAC 2775 Query 80923 ACGGCCACCTCTTCAGCATCT--GTAAACTCGACGATTTCCGTGCACAAATTAGAAGACT 80980 || || || || || | || | | |||| || ||||| ||||||| || ||| | | Sbjct 2774 ACCGCTACTTCGTC--CTTCGACGAATACTCCACAATTTCGGTGCACAGGTTGGAACATT 2717 Query 80981 TAATTGTACCCAGGTTTTTCTGGTTTGACTTGG-CG-TTGCAAGCGTCCTTGTAGCACAT 81038 |||| || || | || | ||| || |||| || ||||| || |||||||| ||| Sbjct 2716 TAATGGTTCCGACATTCTGCTGATT--ACTTTTACGATTGCATGCATCCTTGTACAGCAT 2659 Query 81039 GTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTT 81098 ||| || || || || ||||| |||| || ||| ||| ||| | || | || || Sbjct 2658 GTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCACAAGTCCTGTGCTTT 2599 Query 81099 GACCACCTTGCGGAATTTG----CCTTCGGCCACATACTTGGCGTA-AGCTTCGTCGAAC 81153 |||| || |||| || || | | ||| | ||| |||||| |||||| Sbjct 2598 GACC----TGTCGAATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTC-TCGAAC 2544 Query 81154 TTGGCACCGTGAAGT-TCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTC 81212 | |||| | || || | || | || || |||| || ||||||||| ||| Sbjct 2543 TCTTCACCCC-ACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAGGCTCCACA- 2486 Query 81213 GGTGTCGTTC---TCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAG 81269 | || ||| || ||| ||||||||| || || ||||| || ||| ||||| Sbjct 2485 --TTTCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACAT 2428 Query 81270 GTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGAT 81329 ||||||| || |||| || | || ||| | |||||||| || | | Sbjct 2427 GTCGCGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAACTCGAATAC 2368 Query 81330 GTCCGCATGCCATGGCTCCAGATACACGGCGA----TCGACCCCTTGCGACGGCCACCCT 81385 || ||||||| || |||||||| | ||||| || | |||| | | || |||| Sbjct 2367 ATCACCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTGTTG-CCGCCCT 2309 Query 81386 GGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACT 81445 | | ||||| || || || ||| | || |||| ||| || | | || | ||| Sbjct 2308 GATCCACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAA 2249 Query 81446 GACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATTGAAAGACC 81503 |||||| || || ||| | ||||| ||||| | | ||| || | | || Sbjct 2248 TACCGTTTGTGCCGGAGATGTATGTTCCCTTCGCGCGGATGCAGTGCACGTTCA--GCCC 2191 Query 81504 GATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTC 81563 |||||||| | | ||||||||||| | ||||| | |||| || || ||||| ||||| Sbjct 2190 AATGCCACCGGCCGACTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATACCCTC 2131 Query 81564 GATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTG-AGC 81622 |||||||| | |||| |||| |||||| || | |||||| | | | ||| Sbjct 2130 AATGCTATCATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTGCGTAGC 2071 Query 81623 CG--GCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATA 81680 || ||| |||| || || | ||||| | || || || | |||| ||| | ||| Sbjct 2070 CGCTGCA---AACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAGACAGCAGATTATA 2014 Query 81681 GGTTTC-CTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACA 81739 ||||| | | || | | || | |||||||| || |||||||| || ||||| | || Sbjct 2013 CGTTTCGATCGCTGCATCG-ATGTTTTCACCGTGGATGCCGATAGCGACGCGCATCAGCA 1955 Query 81740 TGTACTGGGG 81749 | | ||| || Sbjct 1954 TATGCTGTGG 1945 >seq3879 Length=3897 Score = 134 bits (148), Expect = 2e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || ||||| || |||||||| || ||| | ||||| ||| || Sbjct 3691 ATGCAGATCTTCGTGAAAACGCTGACTGGCAAGACCATCACTTTGGAGGTCGAGCCATCG 3750 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || ||||||| || || |||||||||||||| ||||||||||| ||| Sbjct 3751 GACACGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAG 3810 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || || || |||||||| || ||||||| ||||| | | || || || Sbjct 3811 CAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAGGATGGACGTACTTTGTCCGATTACAAC 3870 Query 27586 GTCCAAAAGGAATCCAC 27602 |||| ||||| || || Sbjct 3871 ATCCAGAAGGAGTCGAC 3887 >seq28971 Length=24202 Score = 116 bits (128), Expect = 4e-21 Identities = 259/379 (68%), Gaps = 11/379 (3%) Strand=Plus/Plus Query 24753 GGCAAGGTGCAGGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTAT 24812 || |||||| ||||||||| ||| |||| ||||| || ||||| || ||||| Sbjct 2396 GGAAAGGTGGCGGAGACGCCCCAGAACGAGAAGACTCCGTTCTATCCTCGCTCACCGTAC 2455 Query 24813 GGGGTCTCAAAGGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCCCATGGGATA 24872 | | | ||| ||| || ||| ||||| | ||||| || ||||| | || Sbjct 2456 GCGTGTGCCAAGATGTACGGGTATTGGATTGTGATAAACTATCGCGAGGCGTACAATATG 2515 Query 24873 TATGCATGCAACGGAATTCTGTTCAACCATGAGTCGGAGCGTCGGGGACCTGAATTT-GT 24931 | || ||||| || || ||||||||||||||||| || |||||| |||||| || Sbjct 2516 TTCGCCTGCAATGGCATCCTGTTCAACCATGAGTCACCACGCCGGGGAGA-GAATTTCGT 2574 Query 24932 TACACGAAAGATTACTC--TTGGTATTGACCATTG-GATCAAGACA--AGG-GCACCTAT 24985 || || || ||||| | | ||| | ||| | || | || ||| | |||| Sbjct 2575 CACGCGCAAAATTACCCGCTCGGTGGCAAAGATTTCGCTCG-GCCAGCAGGAGTACCTG- 2632 Query 24986 TGAGCTGGGAAACCTAGATGCCAAACGTGATTGGGGGCATGCAGCCGACTACGTCGACGC 25045 |||||||| || ||||| | || |||||||||||||| || ||||||||||| || Sbjct 2633 -GAGCTGGGCAATCTAGACTCGAAGCGTGATTGGGGGCACGCGAAAGACTACGTCGAGGC 2691 Query 25046 CATGTGGCGCATGCTCCAACAGAATAAGCCAGAGGATTTTGTGATCGGCACCGGTCAGAC 25105 ||||||| |||| | || ||| | |||| || ||||| || || | || ||| | || Sbjct 2692 AATGTGGCTCATGATGCAGCAGGAACAGCCGGAAGATTTCGTTATTGCGACGGGTGAAAC 2751 Query 25106 GCATTCTATCAGGGATTTT 25124 || || | ||||| ||| Sbjct 2752 ACACTCGGTGAGGGAATTT 2770 >seq22281 Length=11977 Score = 102 bits (112), Expect = 9e-17 Identities = 113/149 (76%), Gaps = 4/149 (3%) Strand=Plus/Minus Query 64708 TTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCA--T 64765 || ||| ||||| ||| ||||| ||| || ||||| || ||||| | | | || | Sbjct 3220 TTCGGTGAGCGTGTCGTGGCTTTCGCCGCCGTCGAAGGTATCTTCTT--CAGCGGCAGCT 3163 Query 64766 TCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACG 64825 || ||| ||||||||||| || ||||| ||||||||||| || || | || ||||||| Sbjct 3162 TCGCTTCCATTTTCTGGCTCAAGAAGCGTGGCCTGATGCCGGGACTCACCTTCTCGAACG 3103 Query 64826 AGCTGATCTCTCGGGACGAGGGGCTCCAC 64854 ||||||| || || ||||| ||||| ||| Sbjct 3102 AGCTGATTTCGCGCGACGAAGGGCTGCAC 3074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570093903043280