Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq29242 100 2e-16
seq24704 91.5 9e-14
seq3879 82.4 5e-11
>seq29242
Length=5648
Score = 100 bits (110), Expect = 2e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||| |||||| ||| ||||| ||||||||||| || || || || ||
Sbjct 5425 AGACGAAGAACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGACAGGGTGCGG 5484
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| || || || |||||||| || | |||||| || || || || | |||||||
Sbjct 5485 CCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCC 5544
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|| || ||| || | || || | ||| || || ||| || || | ||
Sbjct 5545 TTATC-CTGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGAGT 5603
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| | |||||||||||||||||||||
Sbjct 5604 GATGGTCTTTCCGGTCAGCGTTTTCACAAAAATCTGCAT 5642
>seq24704
Length=53625
Score = 91.5 bits (100), Expect = 9e-14
Identities = 156/224 (70%), Gaps = 2/224 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | ||||| ||| || || ||| || || ||||| || || || || || ||
Sbjct 37694 AGACGAAGCACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGACAGCGTGCGT 37635
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || || |||||||| || || | |||||| || |||||||| | |||||||
Sbjct 37634 CCATCCTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATTCCCTCC 37575
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| || | || || | || || || | ||| || || | |||
Sbjct 37574 TTGTCCTGGATC-TTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGT 37516
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711
|| || ||||| || | ||||| || || |||||||| ||||
Sbjct 37515 AATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTGA 37472
>seq3879
Length=3897
Score = 82.4 bits (90), Expect = 5e-11
Identities = 138/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574
|||||| || ||||| ||||| || | || || | || || || || |||||||| ||
Sbjct 3882 CTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAGCTGCTTACCGGCGAA 3823
Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634
|| |||||||| || || || || | ||||||||||| |||| || | || |||
Sbjct 3822 GATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATC-TTGGCCTTCACGT 3764
Query 34635 T-AAAATTGTGTCTTCGCT--CTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTT 34691
| || ||||| || | ||| || |||| || || || || || || | ||||||
Sbjct 3763 TCTCGATCGTGTC--CGATGGCTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGCGTTTT 3706
Query 34692 CACAAAAATCTGCAT 34706
||| || ||||||||
Sbjct 3705 CACGAAGATCTGCAT 3691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314613111591977
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |