Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq14204 185 8e-42 seq734 136 3e-27 seq3879 131 1e-25 >seq14204 Length=1823 Score = 185 bits (204), Expect = 8e-42 Identities = 225/304 (74%), Gaps = 2/304 (1%) Strand=Plus/Minus Query 135461 ACGCATGACCCGTTGTGGAACGCGGCACAACGGCAGCTTAAGCGAGAAGGCAAAATGCAC 135520 ||||||||| |||||||| | || || | |||| | | || ||||| |||||| Sbjct 430 ACGCATGACGATCTGTGGAACTCAGCCCAGCTGCAGATGGTGAAGGAGGGCAAGATGCAC 371 Query 135521 GGATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGAG 135580 || || |||| ||||| ||||| |||||||| |||| ||| | |||||| | || Sbjct 370 GGCTTCCTGCGGATGTACTGGGCCAAAAAGATCCTGGAGTGGACGAAATCGCCCGAGGAA 311 Query 135581 GCGCTACA-ACACGCAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAA 135639 ||||| | ||| || || | | | || ||| ||||||| | ||||| |||||| | || Sbjct 310 GCGCTTGAGACA-GCCATCTATCTGAACGATCGCTACAGTCTGGATGGGCGCGATCCGAA 252 Query 135640 TGGCTACGTAGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCG 135699 || ||||| ||||| |||||||| || ||| | |||||||| || ||||||||||| Sbjct 251 CGGGTACGTCGGTTGCATGTGGTCGATCGCCGGCATTCACGATCAGGGTTGGAAGGAGCG 192 Query 135700 CAAAGTGTTTGGCAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAATGT 135759 || | ||||| |||||||| || |||||||||||||| |||| | |||||||| || Sbjct 191 TGAAATCTTTGGAAAGATTCGGTACATGAACTATGACGGATGTAAGCGTAAATTTAACGT 132 Query 135760 AAAT 135763 ||| Sbjct 131 GAAT 128 >seq734 Length=4884 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| |||||||||||||| ||| | || || || || || || || ||| Sbjct 237 ATGCAGATTTTTGTGAAAACTCTGACCGGAAAGACCATCACCCTCGAGGTTGAGCCATCC 178 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || ||||||||| ||||| || ||||| || || || || || ||||| ||||| Sbjct 177 GATACGATTGAGAATGTCAAGGCCAAGATTCAGGATAAGGAGGGAATCCCACCAGATCAG 118 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||| || || ||||||| | ||| | || || || ||| Sbjct 117 CAGCGTCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCGGACTATAAC 58 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || ||| | ||| |||| | ||| |||| ||||| || Sbjct 57 ATCCAGAAGGAATCCACCCTCCATCTGGTCCTTCGTCTGCGTGGTGGTAT 8 >seq3879 Length=3897 Score = 131 bits (144), Expect = 1e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| ||||| |||||| | || ||| | || || || || || Sbjct 3691 ATGCAGATCTTCGTGAAAACGCTGACTGGCAAGACCATCACTTTGGAGGTCGAGCCATCG 3750 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| |||| || || || || || ||||| || ||||| || || ||||| Sbjct 3751 GACACGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAG 3810 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | |||||| || || |||| || | || | |||||||||||| Sbjct 3811 CAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAGGATGGACGTACTTTGTCCGATTACAAC 3870 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTG 27194 || || |||||||||||||| || ||| Sbjct 3871 ATCCAGAAGGAGTCGACCTTGCACTTG 3897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434753299538880