Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq24704 154 3e-32 seq734 154 3e-32 seq9735 149 1e-30 seq29242 143 6e-29 seq3879 140 8e-28 >seq24704 Length=53625 Score = 154 bits (170), Expect = 3e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || ||||| || |||||||| |||||||| || || | || || | |||||| Sbjct 37688 AGCACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCATCC 37629 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || |||||||| || || || || || || || | ||| ||||||||| Sbjct 37628 TCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATTCCCTCCTTGTCC 37569 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||| || || ||| || ||||| || || || ||| Sbjct 37568 TGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTC 37509 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || |||||||| || || || || | |||||| || Sbjct 37508 TTACCCGTGAGGGTTTTGACGAAGATCTGCATCTT 37474 >seq734 Length=4884 Score = 154 bits (170), Expect = 3e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || ||||| || || ||||||||||| |||| ||||| | |||||| Sbjct 26 AGGACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCT 85 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || ||||| || || || || || || || | ||| ||||| ||| Sbjct 86 TCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCC 145 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || || || || || || ||||||||||| ||||| ||| Sbjct 146 TGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGGGTGATGGTC 205 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || ||||| || ||||| | |||||| || Sbjct 206 TTTCCGGTCAGAGTTTTCACAAAAATCTGCATATT 240 Score = 86.0 bits (94), Expect = 1e-11 Identities = 135/189 (71%), Gaps = 6/189 (3%) Strand=Plus/Plus Query 210929 TTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAG 210988 |||||| || ||||| | | | ||| ||||| ||||||||||| || || ||||||| Sbjct 2658 TTGGATATTGTAATCGGAGATGATCCGACCATCATCCAGCTGCTTACCGGCAAAGATAAT 2717 Query 210989 GCGTTGTTGGTCAGGAGGAACTCCTT--CCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || || || || | || ||||| | |||| || || || | ||| | || Sbjct 2718 TCGCTGCTGATCCGGGGCAATTCCTTCACGTTGTTCT--ATTTTGTTTTTAATGTCCAAC 2775 Query 211047 ATGGTGTCAGA-GCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 | || || || || || ||||| ||||||||||||||||| || | || |||||||| Sbjct 2776 ACCGTTTCCGACGCGATC-ACCTCAAGAGTGATCGTCTTTCCAGTTAACGTTTTTACAAA 2834 Query 211106 CACCTGCAT 211114 | |||||| Sbjct 2835 GATCTGCAT 2843 >seq9735 Length=15595 Score = 149 bits (164), Expect = 1e-30 Identities = 168/225 (75%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||||| ||||| || ||||| || || || || || || || || || | || || Sbjct 4831 ACGAAGTCGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGT 4772 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| |||||||||||||| || ||||| || || || || || ||||||| || Sbjct 4771 GCGACCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCC 4712 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| ||||||||||| ||||| || ||||| ||||| || || ||||| || Sbjct 4711 TTCCTTATCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAG 4652 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||| || ||||| || || || || | |||||| || Sbjct 4651 TGTGATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATGTT 4607 >seq29242 Length=5648 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || || ||||| || || || |||||||| |||| ||||| | |||||| Sbjct 5431 AGAACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGACAGGGTGCGGCCATCT 5490 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || ||||| || || || || || || || | ||| ||||| ||| Sbjct 5491 TCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCC 5550 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || || || || || || ||||||||||||||||| ||| Sbjct 5551 TGAATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGAGTGATGGTC 5610 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || || ||||| | |||||| Sbjct 5611 TTTCCGGTCAGCGTTTTCACAAAAATCTGCAT 5642 >seq3879 Length=3897 Score = 140 bits (154), Expect = 8e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || ||||| || |||||||| ||||| | | || | |||||| ||||||||||| || Sbjct 3887 GTCGACTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAGCTGCTTACCG 3828 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||||||| | || || || || ||||||| || ||||||||||||||||| ||| Sbjct 3827 GCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTC 3768 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 ||||| ||||| ||||| || || ||||| | |||||| ||||| || || || || Sbjct 3767 ACGTTCTCGATCGTGTCCGATGGCTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGCGTT 3708 Query 211098 TTTACAAACACCTGCAT 211114 || || || | |||||| Sbjct 3707 TTCACGAAGATCTGCAT 3691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158700970696685