Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq24704 104 2e-17
seq29242 102 6e-17
seq3879 102 6e-17
seq9735 98.7 7e-16
seq734 95.1 8e-15
>seq24704
Length=53625
Score = 104 bits (114), Expect = 2e-17
Identities = 145/201 (72%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||| ||||| |||||||||||||| || || || || || || || || ||
Sbjct 37474 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 37533
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
|||| || | || ||| | || | || || ||||| || || | ||||| ||
Sbjct 37534 TCGGATACGATCGAGAATGTGAAGGC-GAAGATCCAGGACAAGGAGGGAATCCCGCCGGA 37592
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||| |||||| | || || ||||| || || ||||| || | |||||| | ||| ||
Sbjct 37593 TCAGCAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAGGATGGACGCACGCTGTCCGACTA 37652
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || |||||||| ||
Sbjct 37653 CAACATCCAGAAAGAGTCTAC 37673
>seq29242
Length=5648
Score = 102 bits (112), Expect = 6e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || ||||| || || ||||| || ||||||||||| ||||| | |
Sbjct 5642 ATGCAGATTTTTGTGAAAACGCTGACCGGAAAGACCATCACTCTCGAGGTTGAGCCATCC 5583
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| || |||| ||| | || | || ||| || || || || | || ||||||||
Sbjct 5582 GATACGATTGAGAATGTCAAGGC-CAAGATTCAGGATAAGGAGGGAATCCCACCAGATCA 5524
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || |||||||| || || |||||||| | ||||| | || || ||
Sbjct 5523 GCAGCGTCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCGGACTATAA 5464
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGAT 23839
||| || || || ||||| | ||| | ||| | | |||| || ||||
Sbjct 5463 CATTCAGAAGGAATCCACCCTCCATCTGGTTCTTCGTCTGCGCGGTGGAT 5414
>seq3879
Length=3897
Score = 102 bits (112), Expect = 6e-17
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| ||||| || || || || || |||||| | || || || | ||
Sbjct 3691 ATGCAGATCTTCGTGAAAACGCTGACTGGCAAGACCATCACTTTGGAGGTCGAGCCATCG 3750
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | || || || ||||| || || | || ||||||||
Sbjct 3751 GACACGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCAG 3810
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||||| || || ||||| || || ||||| || | ||| ||||| ||||||||||
Sbjct 3811 CAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAGGATGGACGTACTTTGTCCGATTACAAC 3870
Query 23791 ATACAAAAAGAGTCCACATTACATTT 23816
|| || || ||||| || || || ||
Sbjct 3871 ATCCAGAAGGAGTCGACCTTGCACTT 3896
>seq9735
Length=15595
Score = 98.7 bits (108), Expect = 7e-16
Identities = 144/201 (72%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| ||||| ||||| || || || ||||| || || || || |
Sbjct 4607 AACATGCAGATTTTCGTGAAAACGCTCACCGGCAAGACCATCACACTTGAGGTCGAGCCT 4666
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
||||||| | || ||| | || | || | | || || ||||| | || |||||
Sbjct 4667 TCGGACACGATCGAGAATGTGAAGGCCAAGA-TCCAGGATAAGGAAGGCATTCCTCCAGA 4725
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||| |||||| | || ||||||||||| || ||||| || | |||||| | ||| ||
Sbjct 4726 TCAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACTA 4785
Query 23787 CAACATACAAAAAGAGTCCAC 23807
||| || || || || || ||
Sbjct 4786 CAATATTCAGAAGGAATCGAC 4806
>seq734
Length=4884
Score = 95.1 bits (104), Expect = 8e-15
Identities = 143/201 (71%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| ||||||||||| || ||||| || || ||||| || ||||| ||||| ||||| |
Sbjct 240 AATATGCAGATTTTTGTGAAAACTCTGACCGGAAAGACCATCACCCTCGAGGTTGAGCCA 181
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| || || |||| ||| | || | || ||| || || || || | || |||||
Sbjct 180 TCCGATACGATTGAGAATGTCAAGGC-CAAGATTCAGGATAAGGAGGGAATCCCACCAGA 122
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||| |||||| | || |||||||| || || |||||||| | ||||| | || ||
Sbjct 121 TCAGCAGCGTCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCGGACTA 62
Query 23787 CAACATACAAAAAGAGTCCAC 23807
||||| || || || |||||
Sbjct 61 TAACATCCAGAAGGAATCCAC 41
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337884495147452
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |