Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq25975 401 9e-107 seq22281 93.3 6e-14 >seq25975 Length=7706 Score = 401 bits (444), Expect = 9e-107 Identities = 1202/1838 (65%), Gaps = 24/1838 (1%) Strand=Plus/Minus Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862 || || || || || | ||| ||||| |||||||| | ||||| |||| ||||||||| Sbjct 3677 GCCGGCTTGGTGCGCAAATAATACATGCCAGTTTTCAAACCCATTTTCCACCCGTAGAAA 3618 Query 76863 TGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTT 76922 || || ||||| || || | || || || | |||||||| | ||| || Sbjct 3617 TGGATCGACGTCAGCTTACCGTAGTTGGGTTCCGCGACGTGAATATTGAACGATTGCGAC 3558 Query 76923 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTT--TGAGGAATTT 76980 |||||||| || || || | ||| || |||||||| || || || |||| || | Sbjct 3557 TGATCGATAAACGCACCGCGATCCGCTGCCATTTTGATGCACGTTTTCACTGAG--ATCT 3500 Query 76981 CCCAAATAGTTTTGAAAACTTGTTTGATATCAT-CTGGAAGGTTTGTAT--TTTGAATGG 77037 |||| | |||||| ||| | || || | | ||| || | || ||||||| | Sbjct 3499 CCCATACCGTTTTGTAAAGATCGCGAATTTCTTGCGGGATAGTCTCAATCTTTTGAATTG 3440 Query 77038 AACCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTA 77097 | ||| | || | ||| ||||| ||||| || ||| ||| | | | || | Sbjct 3439 ATCCATTGTTCGACAGAATCTCGTTCTTCATATCGAGATCCCATAATCCCATGTTGGTCA 3380 Query 77098 AAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGT 77157 | | |||||||| | || || | ||||| || || || | || | | | ||| Sbjct 3379 GATCCTGCAGGAGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTATTGT 3320 Query 77158 AAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAG 77217 | | || || || || || | ||||||||||| || | |||||| || || |||| Sbjct 3319 ATACGTTCGACGTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAG 3260 Query 77218 CAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTT 77277 | || ||||| || |||| || | ||| | || ||| || | ||||| || | Sbjct 3259 CCGTCGGCATCGGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCCT 3200 Query 77278 TTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAA 77337 | | | ||| | ||| || || | || | | ||| | ||||| || || | Sbjct 3199 TCAACTCCGACCAGTTCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCAGGA 3140 Query 77338 TTCCGTTACT-AGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGT 77396 | || ||||| | | | | || | || ||||| || ||||| || | || | Sbjct 3139 TGCCCTTACTCACCGGACTACCC-TCGTACGTTTCGTACGGTCCATCACGAGCGGCCAAC 3081 Query 77397 TCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCT 77456 ||||| || ||||||| ||||||| |||| || |||||||| || | | || || | | Sbjct 3080 TCACAGCTAGCTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGCTTT 3021 Query 77457 TGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGA 77516 || || || || || ||||||| | | | || || ||||| || | ||||||| Sbjct 3020 TGAGCCTCCTCGCTTTCGTACGGATAGCGCATTAAGATGAACGCATCGGCCATTCCCTGA 2961 Query 77517 ACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAA 77576 || || ||||| || |||| || | | | ||||| ||||| || || | |||||| Sbjct 2960 ACACCTATACCGATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACAGGATAG 2901 Query 77577 TAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGT 77636 || || | || || || || || ||||| | |||| ||| | || ||||| || Sbjct 2900 TAGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTATCTTAGCGACTTCCTTCAGC 2841 Query 77637 TTAAGAAAATCAAATCTTCCATCTA---TAACAAACATGTTCAAAGCTATAGATGCTAGA 77693 || ||||||| | || |||| | ||||||||||||||||| || || || ||| Sbjct 2840 TTGGTAAAATCATACGTTTTATCTTGCTTTACAAACATGTTCAAAGCAATCGAGGCCAGA 2781 Query 77694 TTACAAACTGCTACCTCATTAGCGTTGGC--ATATTGTATTATCTCGGTACATAGATTAC 77751 || || || ||||| || | | | | | ||| | | || ||||| || || || Sbjct 2780 TTGCACACCGCTACTTCGTC--CTTCGACGAATACTCCACAATTTCGGTGCACAGGTTGG 2723 Query 77752 TACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAA 77811 |||||| || || || | ||| || || || || || |||||||| ||||| || | Sbjct 2722 AACATTTAATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCATCCTTGTACA 2663 Query 77812 GAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG 77871 | || | || || ||||| | ||| || ||||| || | ||| | | | | Sbjct 2662 GCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCACAAGTCCTGTG 2603 Query 77872 CTTTTATCA-TAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAAT 77930 |||| | | | || | | || | |||| | || || || || ||| || || Sbjct 2602 CTTTGACCTGTCGAATAA-AGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAAC 2544 Query 77931 TCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCA 77990 || || ||||| ||| ||| || || || || | ||| ||||||| ||| Sbjct 2543 TCTTCACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAGGCTCCACATT 2484 Query 77991 CCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCT 78050 ||| ||| || || ||||| || ||||| |||||||| ||||| || | || Sbjct 2483 TCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACATGTCG 2424 Query 78051 CGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCA 78110 |||| | ||||| || || || || || || |||||||||||||| | | |||| Sbjct 2423 CGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAACTCGAATACATCA 2364 Query 78111 GAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCT 78170 |||||| ||||| ||||| || || | ||||||| | ||| || || |||||||| Sbjct 2363 CCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTGTTGCCGCCCTGATCC 2304 Query 78171 ATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCA 78230 | || | || || || || || || | || ||| || | | ||||| || | || Sbjct 2303 ACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAATACCG 2244 Query 78231 TTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAATGGATATCCCTATTC 78288 ||||| || || || || |||| | ||||| || | | | | | | ||| || | Sbjct 2243 TTTGTGCCGGAGATGTATGTTCCCTTCGCGCGGATGCAGTGC--ACGTTCAGCCCAATGC 2186 Query 78289 CTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATAC 78348 | || ||| ||| || || || || || | |||| |||||||| |||||||| || | Sbjct 2185 CACCGGCCGACTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATACCCTCAATGC 2126 Query 78349 TGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCAT 78408 | ||||| |||| | || ||||||||| ||| | ||| | | || | || Sbjct 2125 TATCATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTGCGTAGCCGCTG 2066 Query 78409 TAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAA 78468 ||| | ||||| || || || ||||| | |||||| || ||||| || ||||| | Sbjct 2065 CAAACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAGACAGCAGATTATACGTTTCGA 2006 Query 78469 TAGCTGATTCTATGTCC-CATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGA 78527 | |||| || |||| || | || || || | || || ||||||| ||||||||| Sbjct 2005 TCGCTGCATCGATGTTTTCACCG-TGGATGCCGATAGCGACGCGCATCAGCATATGCTGT 1947 Query 78528 GGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAA 78587 |||| ||||| | ||| ||||| || | |||||||||| |||||| |||||||| Sbjct 1946 GGTCGCTCAACAATTTTACCCTTTATCTTGAGCAAGTATGATCGTTCCAATGTTTTAAAG 1887 Query 78588 CCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625 || ||||||||||| |||||| | ||||||||||| Sbjct 1886 CCGAAATAGTTGTACCCAAAGTCGCGATCGTAAATAAT 1849 >seq22281 Length=11977 Score = 93.3 bits (102), Expect = 6e-14 Identities = 178/260 (68%), Gaps = 3/260 (1%) Strand=Plus/Plus Query 48129 TTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTA 48188 || ||||| | || || || || || || || ||||| || | ||| | ||||| Sbjct 3048 TTGAACATCAGGCAGGCGAAGTCGCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTC 3107 Query 48189 GAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGAT 48248 || || ||||| || ||||| || ||||| || |||||||| || || | ||||| Sbjct 3108 GAGAAGGTGAGTCCCGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTG 3167 Query 48249 CCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCT 48308 || ||||| || ||||| ||||| || || || | | ||| ||| | | || Sbjct 3168 CCGCTGAAGAAGATACCTTCGACGGCGGCGAAAGCCACGACACGCTCACCGAAGTTAGCC 3227 Query 48309 TCGTTG-TGTA--TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTT 48365 | ||| || | |||| | | ||||| |||||||||||||| || || |||| ||| Sbjct 3228 TTCTTGCTGGAGATCCAGTTTAGCGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCGTT 3287 Query 48366 TCTATAGCATTAAAGAGAAA 48385 || || |||||||| || || Sbjct 3288 TCGATGGCATTAAACAGGAA 3307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694405095040160