Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq25975 401 9e-107
seq22281 93.3 6e-14
>seq25975
Length=7706
Score = 401 bits (444), Expect = 9e-107
Identities = 1202/1838 (65%), Gaps = 24/1838 (1%)
Strand=Plus/Minus
Query 76803 GCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAA 76862
|| || || || || | ||| ||||| |||||||| | ||||| |||| |||||||||
Sbjct 3677 GCCGGCTTGGTGCGCAAATAATACATGCCAGTTTTCAAACCCATTTTCCACCCGTAGAAA 3618
Query 76863 TGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTT 76922
|| || ||||| || || | || || || | |||||||| | ||| ||
Sbjct 3617 TGGATCGACGTCAGCTTACCGTAGTTGGGTTCCGCGACGTGAATATTGAACGATTGCGAC 3558
Query 76923 TGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTT--TGAGGAATTT 76980
|||||||| || || || | ||| || |||||||| || || || |||| || |
Sbjct 3557 TGATCGATAAACGCACCGCGATCCGCTGCCATTTTGATGCACGTTTTCACTGAG--ATCT 3500
Query 76981 CCCAAATAGTTTTGAAAACTTGTTTGATATCAT-CTGGAAGGTTTGTAT--TTTGAATGG 77037
|||| | |||||| ||| | || || | | ||| || | || ||||||| |
Sbjct 3499 CCCATACCGTTTTGTAAAGATCGCGAATTTCTTGCGGGATAGTCTCAATCTTTTGAATTG 3440
Query 77038 AACCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTA 77097
| ||| | || | ||| ||||| ||||| || ||| ||| | | | || |
Sbjct 3439 ATCCATTGTTCGACAGAATCTCGTTCTTCATATCGAGATCCCATAATCCCATGTTGGTCA 3380
Query 77098 AAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGT 77157
| | |||||||| | || || | ||||| || || || | || | | | |||
Sbjct 3379 GATCCTGCAGGAGATGGTGGTTTACCACCTGAAACTCACCCGATAGCACGCGTCTATTGT 3320
Query 77158 AAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAG 77217
| | || || || || || | ||||||||||| || | |||||| || || ||||
Sbjct 3319 ATACGTTCGACGTGTAGGGCTCGAACGATTCATTGTTGCCAAGAATTTGGGCTGTCGAAG 3260
Query 77218 CAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTT 77277
| || ||||| || |||| || | ||| | || ||| || | ||||| || |
Sbjct 3259 CCGTCGGCATCGGGGCCAACAGCAGCGAATTGCGGATACCGTGCTTGGCTATTTTTTCCT 3200
Query 77278 TTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAA 77337
| | | ||| | ||| || || | || | | ||| | ||||| || || |
Sbjct 3199 TCAACTCCGACCAGTTCCACAGCTCAGTCGGCTCCTTGTTCCACATTTCGTACTGCAGGA 3140
Query 77338 TTCCGTTACT-AGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGT 77396
| || ||||| | | | | || | || ||||| || ||||| || | || |
Sbjct 3139 TGCCCTTACTCACCGGACTACCC-TCGTACGTTTCGTACGGTCCATCACGAGCGGCCAAC 3081
Query 77397 TCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCT 77456
||||| || ||||||| ||||||| |||| || |||||||| || | | || || | |
Sbjct 3080 TCACAGCTAGCTTCCAGTGCTCCGAAATAGATGGTTTCGAATATTTGTTGGTTCAGCTTT 3021
Query 77457 TGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGA 77516
|| || || || || ||||||| | | | || || ||||| || | |||||||
Sbjct 3020 TGAGCCTCCTCGCTTTCGTACGGATAGCGCATTAAGATGAACGCATCGGCCATTCCCTGA 2961
Query 77517 ACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAA 77576
|| || ||||| || |||| || | | | ||||| ||||| || || | ||||||
Sbjct 2960 ACACCTATACCGATGGGTCGGTGGCGCATGTTGGAGCGCTTAGCCTCCGGGACAGGATAG 2901
Query 77577 TAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGT 77636
|| || | || || || || || ||||| | |||| ||| | || ||||| ||
Sbjct 2900 TAGTTGACATCAATGATCTTGTTCAGATTGCGCGTTACTATCTTAGCGACTTCCTTCAGC 2841
Query 77637 TTAAGAAAATCAAATCTTCCATCTA---TAACAAACATGTTCAAAGCTATAGATGCTAGA 77693
|| ||||||| | || |||| | ||||||||||||||||| || || || |||
Sbjct 2840 TTGGTAAAATCATACGTTTTATCTTGCTTTACAAACATGTTCAAAGCAATCGAGGCCAGA 2781
Query 77694 TTACAAACTGCTACCTCATTAGCGTTGGC--ATATTGTATTATCTCGGTACATAGATTAC 77751
|| || || ||||| || | | | | | ||| | | || ||||| || || ||
Sbjct 2780 TTGCACACCGCTACTTCGTC--CTTCGACGAATACTCCACAATTTCGGTGCACAGGTTGG 2723
Query 77752 TACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAA 77811
|||||| || || || | ||| || || || || || |||||||| ||||| || |
Sbjct 2722 AACATTTAATGGTTCCGACATTCTGCTGATTACTTTTACGATTGCATGCATCCTTGTACA 2663
Query 77812 GAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG 77871
| || | || || ||||| | ||| || ||||| || | ||| | | | |
Sbjct 2662 GCATGTATGGTACGCCCGTTTCCACCTGCGACTCGATGATCGCGAACCACAAGTCCTGTG 2603
Query 77872 CTTTTATCA-TAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAAT 77930
|||| | | | || | | || | |||| | || || || || ||| || ||
Sbjct 2602 CTTTGACCTGTCGAATAA-AGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAAC 2544
Query 77931 TCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCA 77990
|| || ||||| ||| ||| || || || || | ||| ||||||| |||
Sbjct 2543 TCTTCACCCCACGTATCTGCCAGACCGGGACAATCGTGTGGACACATCAGGCTCCACATT 2484
Query 77991 CCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCT 78050
||| ||| || || ||||| || ||||| |||||||| ||||| || | ||
Sbjct 2483 TCATTCGCCTCCACACGCTTCATGAACAGATCCGGTATCCACAGAGCGTAGAACATGTCG 2424
Query 78051 CGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCA 78110
|||| | ||||| || || || || || || |||||||||||||| | | ||||
Sbjct 2423 CGGGCACGGACCTCTTCCTTGCCAGTGTTTTTCTTTAGATCGAGAAACTCGAATACATCA 2364
Query 78111 GAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCT 78170
|||||| ||||| ||||| || || | ||||||| | ||| || || ||||||||
Sbjct 2363 CCATGCCACGGTTCCAGATAGATGGCGAATGCTCCAGGCCTTTTGTTGCCGCCCTGATCC 2304
Query 78171 ATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCA 78230
| || | || || || || || || | || ||| || | | ||||| || | ||
Sbjct 2303 ACGTACCGTGCCGTATTGTTGTACACGCGCAGCATCGGCACCAATCCGTTTGAAATACCG 2244
Query 78231 TTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT--ATTACTAATGGATATCCCTATTC 78288
||||| || || || || |||| | ||||| || | | | | | | ||| || |
Sbjct 2243 TTTGTGCCGGAGATGTATGTTCCCTTCGCGCGGATGCAGTGC--ACGTTCAGCCCAATGC 2186
Query 78289 CTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATAC 78348
| || ||| ||| || || || || || | |||| |||||||| |||||||| || |
Sbjct 2185 CACCGGCCGACTTTGAAATCAGCGCACATTGCTTCAGAGTATCGTAAATACCCTCAATGC 2126
Query 78349 TGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCAT 78408
| ||||| |||| | || ||||||||| ||| | ||| | | || | ||
Sbjct 2125 TATCATCAGACATGGTCAGCAGAAAACAGGAAGAGAGCTGAGGCCGCTGCGTAGCCGCTG 2066
Query 78409 TAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAA 78468
||| | ||||| || || || ||||| | |||||| || ||||| || ||||| |
Sbjct 2065 CAAACATGGTCGGTGAGGCGTGGGTAAAGTAGCGTTCAGACAGCAGATTATACGTTTCGA 2006
Query 78469 TAGCTGATTCTATGTCC-CATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGA 78527
| |||| || |||| || | || || || | || || ||||||| |||||||||
Sbjct 2005 TCGCTGCATCGATGTTTTCACCG-TGGATGCCGATAGCGACGCGCATCAGCATATGCTGT 1947
Query 78528 GGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAA 78587
|||| ||||| | ||| ||||| || | |||||||||| |||||| ||||||||
Sbjct 1946 GGTCGCTCAACAATTTTACCCTTTATCTTGAGCAAGTATGATCGTTCCAATGTTTTAAAG 1887
Query 78588 CCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625
|| ||||||||||| |||||| | |||||||||||
Sbjct 1886 CCGAAATAGTTGTACCCAAAGTCGCGATCGTAAATAAT 1849
>seq22281
Length=11977
Score = 93.3 bits (102), Expect = 6e-14
Identities = 178/260 (68%), Gaps = 3/260 (1%)
Strand=Plus/Plus
Query 48129 TTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTA 48188
|| ||||| | || || || || || || || ||||| || | ||| | |||||
Sbjct 3048 TTGAACATCAGGCAGGCGAAGTCGCAGTGCAGCCCTTCGTCGCGCGAAATCAGCTCGTTC 3107
Query 48189 GAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGAT 48248
|| || ||||| || ||||| || ||||| || |||||||| || || | |||||
Sbjct 3108 GAGAAGGTGAGTCCCGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGAAGCGAAGCTG 3167
Query 48249 CCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCT 48308
|| ||||| || ||||| ||||| || || || | | ||| ||| | | ||
Sbjct 3168 CCGCTGAAGAAGATACCTTCGACGGCGGCGAAAGCCACGACACGCTCACCGAAGTTAGCC 3227
Query 48309 TCGTTG-TGTA--TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTT 48365
| ||| || | |||| | | ||||| |||||||||||||| || || |||| |||
Sbjct 3228 TTCTTGCTGGAGATCCAGTTTAGCGCCCAGTCAGCCTTCTTCTTCACGCACGGCAGCGTT 3287
Query 48366 TCTATAGCATTAAAGAGAAA 48385
|| || |||||||| || ||
Sbjct 3288 TCGATGGCATTAAACAGGAA 3307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694405095040160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |