Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq24704 136 3e-27
seq9735 134 1e-26
seq3879 129 4e-25
seq734 107 1e-18
seq29242 102 6e-17
>seq24704
Length=53625
Score = 136 bits (150), Expect = 3e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
|||||| ||||| || ||| || ||||||||||| |||| || ||| | || ||
Sbjct 37686 CACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCATCCTC 37627
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| ||||| ||||||| |||||||||||| | || | || ||||| |||
Sbjct 37626 CAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATTCCCTCCTTGTCCTG 37567
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
|||||| ||||| | | || || || | || || ||||| | ||||| |||||
Sbjct 37566 GATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTT 37507
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||||| || |||||||| |||||
Sbjct 37506 ACCCGTGAGGGTTTTGACGAAGATCTGCAT 37477
>seq9735
Length=15595
Score = 134 bits (148), Expect = 1e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
|||| || ||||| ||||| || ||||| || || ||||| |||| ||| |||
Sbjct 4827 AGTCGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGA 4768
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||||||||| ||||||||||||| |||||||||||||| ||| | ||||||
Sbjct 4767 CCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCC 4708
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| ||||| ||||| | | || ||||| | | || ||||| | ||
Sbjct 4707 TTATCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTG 4648
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| ||||| || ||||| || |||||||| || ||||||
Sbjct 4647 ATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATG 4609
>seq3879
Length=3897
Score = 129 bits (142), Expect = 4e-25
Identities = 146/193 (76%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||| |||||||||||||||| | || | || ||||||||||| ||||| ||
Sbjct 3882 CTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAGCTGCTTACCGGCGAA 3823
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
|||||||||||||||||||| ||| | || ||||| ||| ||||| ||||| ||
Sbjct 3822 GATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCAC-GT 3764
Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324
|| | || ||||| | | || ||||||| || || ||||| || || || || ||||
Sbjct 3763 TCTCGATCGTGTCCGATGGCTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGCGTTTTCA 3704
Query 44325 CGAAGATTTGCAT 44337
||||||| |||||
Sbjct 3703 CGAAGATCTGCAT 3691
>seq734
Length=4884
Score = 107 bits (118), Expect = 1e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
||||| || || ||| ||||| |||||||| || || | || ||| | || |||
Sbjct 29 ACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCTTCC 88
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||||| |||||||||||||| || | || ||||| |||
Sbjct 89 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGA 148
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | || || |||| | || ||||| | || || ||||||
Sbjct 149 ATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGGGTGATGGTCTTT 208
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || || ||||| || || |||||
Sbjct 209 CCGGTCAGAGTTTTCACAAAAATCTGCAT 237
>seq29242
Length=5648
Score = 102 bits (112), Expect = 6e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
||||| || || ||| ||||| || ||||| || || | || ||| | || |||
Sbjct 5434 ACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGACAGGGTGCGGCCATCTTCC 5493
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||||| |||||||||||||| || | || ||||| |||
Sbjct 5494 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGA 5553
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | || || |||| | || ||||| | || || ||||||
Sbjct 5554 ATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGAGTGATGGTCTTT 5613
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || || ||||| || || |||||
Sbjct 5614 CCGGTCAGCGTTTTCACAAAAATCTGCAT 5642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359857159565673
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