Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq24704 136 3e-27 seq9735 134 1e-26 seq3879 129 4e-25 seq734 107 1e-18 seq29242 102 6e-17 >seq24704 Length=53625 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 |||||| ||||| || ||| || ||||||||||| |||| || ||| | || || Sbjct 37686 CACCAGATGAAGGGTAGACTCTTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCATCCTC 37627 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| ||||| ||||||| |||||||||||| | || | || ||||| ||| Sbjct 37626 CAGCTGCTTACCGGCGAAGATCAGACGCTGCTGATCCGGCGGGATTCCCTCCTTGTCCTG 37567 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||||| | | || || || | || || ||||| | ||||| ||||| Sbjct 37566 GATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATGGTCTT 37507 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||||| || |||||||| ||||| Sbjct 37506 ACCCGTGAGGGTTTTGACGAAGATCTGCAT 37477 >seq9735 Length=15595 Score = 134 bits (148), Expect = 1e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||| || ||||| ||||| || ||||| || || ||||| |||| ||| ||| Sbjct 4827 AGTCGCAGGACCAGATGAAGGGTCGATTCCTTCTGAATATTGTAGTCGGAGAGAGTGCGA 4768 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||||||| ||||||||||||| |||||||||||||| ||| | |||||| Sbjct 4767 CCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCC 4708 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||||| | | || ||||| | | || ||||| | || Sbjct 4707 TTATCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTG 4648 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||| || ||||| || |||||||| || |||||| Sbjct 4647 ATGGTCTTGCCGGTGAGCGTTTTCACGAAAATCTGCATG 4609 >seq3879 Length=3897 Score = 129 bits (142), Expect = 4e-25 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| |||||||||||||||| | || | || ||||||||||| ||||| || Sbjct 3882 CTCCTTCTGGATGTTGTAATCGGACAAAGTACGTCCATCCTCCAGCTGCTTACCGGCGAA 3823 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||||||||||||||||||| ||| | || ||||| ||| ||||| ||||| || Sbjct 3822 GATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCAC-GT 3764 Query 44266 TC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | || ||||| | | || ||||||| || || ||||| || || || || |||| Sbjct 3763 TCTCGATCGTGTCCGATGGCTCGACCTCCAAAGTGATGGTCTTGCCAGTCAGCGTTTTCA 3704 Query 44325 CGAAGATTTGCAT 44337 ||||||| ||||| Sbjct 3703 CGAAGATCTGCAT 3691 >seq734 Length=4884 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||| || || ||| ||||| |||||||| || || | || ||| | || ||| Sbjct 29 ACCAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCTTCC 88 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||||| |||||||||||||| || | || ||||| ||| Sbjct 89 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGA 148 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || || |||| | || ||||| | || || |||||| Sbjct 149 ATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGGGTGATGGTCTTT 208 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || ||||| || || ||||| Sbjct 209 CCGGTCAGAGTTTTCACAAAAATCTGCAT 237 >seq29242 Length=5648 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||| || || ||| ||||| || ||||| || || | || ||| | || ||| Sbjct 5434 ACCAGATGGAGGGTGGATTCCTTCTGAATGTTATAGTCCGACAGGGTGCGGCCATCTTCC 5493 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||||| |||||||||||||| || | || ||||| ||| Sbjct 5494 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGATCTGGTGGGATTCCCTCCTTATCCTGA 5553 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || || |||| | || ||||| | || || |||||| Sbjct 5554 ATCTTGGCCTTGACATTCTCAATCGTATCGGATGGCTCAACCTCGAGAGTGATGGTCTTT 5613 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || ||||| || || ||||| Sbjct 5614 CCGGTCAGCGTTTTCACAAAAATCTGCAT 5642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359857159565673