Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02]
30,369 sequences; 172,658,580 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq24506 91.5 2e-13
>seq24506
Length=9138
Score = 91.5 bits (100), Expect = 2e-13
Identities = 214/322 (66%), Gaps = 6/322 (2%)
Strand=Plus/Plus
Query 155730 CGACTCAACGCCGTCGATTGAGCGGCGCGTACCAACCCTTCCAATTCAGCGCCGCTGTAA 155789
||| ||| || || || || || || || ||||| ||||| | ||| || ||||| ||
Sbjct 3810 CGATTCATTGCTGTAGACTGCGCTGCACGCACCAAGCCTTCTAGTTCGGCACCGCTAAAA 3869
Query 155790 TTTTTAGTTTCAACGGCTATTTTATTTAAGTCTACGTCGGAAGCTAATATGTTGTGAGAT 155849
|| || |||| | | | || | |||||| || || | ||| || | ||| |
Sbjct 3870 TTCTTGGTTTTTTGGCCAAGTTCACGTAAGTCCACATCAGGAGCCAACTTCTTGAACTCT 3929
Query 155850 TTCAT---TTTAGCAACGTGCACCTTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAAT 155906
||||| | | | | || | || ||||| || | || || | ||| | || |
Sbjct 3930 TTCATACGTCTTGTA---TGGATGTTCAAAATCTGCACGCGACCTTCTTCGTTAGGAAGG 3986
Query 155907 CCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCG 155966
| ||||| || | | ||| | || ||||||| |||||| |||||||| || | ||
Sbjct 3987 CTGATTTCCATTTGTACTTCTAGACGGCCAGGTCGTAATAACGCTTCGTCTATCATATCT 4046
Query 155967 GGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGATTCTACACCGTCTATTTTA 156026
|| || ||||| || |||| || ||||||||||| ||||| || || |||||
Sbjct 4047 TTTCGATTAGTCATCCCAATGACCAATATGTTGTTTAATTGCTCTACTCCATCAATTTTT 4106
Query 156027 GACAATAATTGATTGACTACGG 156048
| ||| | ||||||||| ||||
Sbjct 4107 GCCAACAGTTGATTGACAACGG 4128
Score = 89.7 bits (98), Expect = 7e-13
Identities = 190/275 (69%), Gaps = 8/275 (3%)
Strand=Plus/Plus
Query 156177 ACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACCGTTAACTATTTTG 156236
|||||||| || |||||||| |||||||||| ||| | || ||||| |||||||| ||
Sbjct 4371 ACGTTAGCCTCTGATTCACCAACATATTTGTCTAAAATTTGCGGACCATTAACTATCTT- 4429
Query 156237 ACGGGTCGTGATTTAAAAGC-TTG-AGCGATACAGCGAGCCATTAATGTTTTACCGCACC 156294
||| ||| || ||| ||| | | || || ||||| | |||||| || |
Sbjct 4430 -CGGTTCGCGAGCGTTCAGCATTGTACCAATTTGTCGTGCCATAAGTGTTTTTCCAGTAC 4488
Query 156295 CAGGAGGTCCGTATAACAATACT-CCTTTTATATGTTTACAACCTAATTTTTCAGTTATT 156353
|||||||||| || || || | | ||||||| |||||| || || | | |||| || |
Sbjct 4489 CAGGAGGTCCATA-AAGAAGAATGCCTTTTACATGTTTGCATCCCAGCTGTTCAACTACT 4547
Query 156354 TCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAATGAGAG-AAAATTCTTTATC 156412
||| |||| | || |||||||| | || ||||| || | |||||| ||
Sbjct 4548 TCTGGTGGAAAAACACGTGATGCAAATGCACGCCGGAAAAT-AGCGTTAAATTCGCGGTC 4606
Query 156413 CAATCCCCCCACACCCATTTCCTCAAAATTCCAAT 156447
||| || || | ||||||| | |||| |||||
Sbjct 4607 CAAACCACCGATACCCATTCTTCCGAAATCCCAAT 4641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 666821969915640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |