Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20christyi_20[genbank_20GCA_5F000349165.1_202013-04-02] 30,369 sequences; 172,658,580 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq24506 91.5 2e-13 >seq24506 Length=9138 Score = 91.5 bits (100), Expect = 2e-13 Identities = 214/322 (66%), Gaps = 6/322 (2%) Strand=Plus/Plus Query 155730 CGACTCAACGCCGTCGATTGAGCGGCGCGTACCAACCCTTCCAATTCAGCGCCGCTGTAA 155789 ||| ||| || || || || || || || ||||| ||||| | ||| || ||||| || Sbjct 3810 CGATTCATTGCTGTAGACTGCGCTGCACGCACCAAGCCTTCTAGTTCGGCACCGCTAAAA 3869 Query 155790 TTTTTAGTTTCAACGGCTATTTTATTTAAGTCTACGTCGGAAGCTAATATGTTGTGAGAT 155849 || || |||| | | | || | |||||| || || | ||| || | ||| | Sbjct 3870 TTCTTGGTTTTTTGGCCAAGTTCACGTAAGTCCACATCAGGAGCCAACTTCTTGAACTCT 3929 Query 155850 TTCAT---TTTAGCAACGTGCACCTTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAAT 155906 ||||| | | | | || | || ||||| || | || || | ||| | || | Sbjct 3930 TTCATACGTCTTGTA---TGGATGTTCAAAATCTGCACGCGACCTTCTTCGTTAGGAAGG 3986 Query 155907 CCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCG 155966 | ||||| || | | ||| | || ||||||| |||||| |||||||| || | || Sbjct 3987 CTGATTTCCATTTGTACTTCTAGACGGCCAGGTCGTAATAACGCTTCGTCTATCATATCT 4046 Query 155967 GGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGATTCTACACCGTCTATTTTA 156026 || || ||||| || |||| || ||||||||||| ||||| || || ||||| Sbjct 4047 TTTCGATTAGTCATCCCAATGACCAATATGTTGTTTAATTGCTCTACTCCATCAATTTTT 4106 Query 156027 GACAATAATTGATTGACTACGG 156048 | ||| | ||||||||| |||| Sbjct 4107 GCCAACAGTTGATTGACAACGG 4128 Score = 89.7 bits (98), Expect = 7e-13 Identities = 190/275 (69%), Gaps = 8/275 (3%) Strand=Plus/Plus Query 156177 ACGTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACCGTTAACTATTTTG 156236 |||||||| || |||||||| |||||||||| ||| | || ||||| |||||||| || Sbjct 4371 ACGTTAGCCTCTGATTCACCAACATATTTGTCTAAAATTTGCGGACCATTAACTATCTT- 4429 Query 156237 ACGGGTCGTGATTTAAAAGC-TTG-AGCGATACAGCGAGCCATTAATGTTTTACCGCACC 156294 ||| ||| || ||| ||| | | || || ||||| | |||||| || | Sbjct 4430 -CGGTTCGCGAGCGTTCAGCATTGTACCAATTTGTCGTGCCATAAGTGTTTTTCCAGTAC 4488 Query 156295 CAGGAGGTCCGTATAACAATACT-CCTTTTATATGTTTACAACCTAATTTTTCAGTTATT 156353 |||||||||| || || || | | ||||||| |||||| || || | | |||| || | Sbjct 4489 CAGGAGGTCCATA-AAGAAGAATGCCTTTTACATGTTTGCATCCCAGCTGTTCAACTACT 4547 Query 156354 TCTACCGGAACTGATCTGGAAGCAAATGCTCTTCGAAAAATGAGAG-AAAATTCTTTATC 156412 ||| |||| | || |||||||| | || ||||| || | |||||| || Sbjct 4548 TCTGGTGGAAAAACACGTGATGCAAATGCACGCCGGAAAAT-AGCGTTAAATTCGCGGTC 4606 Query 156413 CAATCCCCCCACACCCATTTCCTCAAAATTCCAAT 156447 ||| || || | ||||||| | |||| ||||| Sbjct 4607 CAAACCACCGATACCCATTCTTCCGAAATCCCAAT 4641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666821969915640