Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq7525 102 8e-17
seq7526 95.1 1e-14
>seq7525
Length=4038190
Score = 102 bits (112), Expect = 8e-17
Identities = 184/262 (70%), Gaps = 8/262 (3%)
Strand=Plus/Minus
Query 118936 TTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTG-TCGTGGAGTCC 118994
|||||||| || || || ||||| | ||||||||||| || ||| ||||||| ||
Sbjct 440074 TTCATGTACCGAATTTTACCAAAGATTTCGCGCTCCTTCCA-GCCCTGATCGTGGATGCC 440016
Query 118995 TGCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTA-ACTCGTACT 119053
|| | | ||| | || || ||||| ||||| ||||| || || | ||| |||
Sbjct 440015 CGCGATCGACCACATGCAACCGACGTACCCGTTCGGATCCCGCCCATCCAGACT-GTAGC 439957
Query 119054 TATCGTTTAAGTAGATACAGACGCTTAACGCACTT--TCCGGAGTCTTACTCCATTCCAG 119111
|||||| | ||||| | || | | || ||| || || || || |||| |||||
Sbjct 439956 GATCGTTCAGATAGATC--GCCGTCTCAAGCGCTTCCTCGGGCGTTTTCGTCCACTCCAG 439899
Query 119112 TAtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTG 119171
|| ||||| ||||||||||| || | | |||||||| || ||||| || | ||||||
Sbjct 439898 GATCTTTTTGGCCCAGTACATGCGCAGGAAGCCGTGCATCTTGCCCTCCTTCACCATCTG 439839
Query 119172 AAGTTGTGCGGTGTTCCATAGA 119193
|| || || | |||||| |||
Sbjct 439838 CAGCTGGGCCGAGTTCCACAGA 439817
>seq7526
Length=6110091
Score = 95.1 bits (104), Expect = 1e-14
Identities = 180/265 (68%), Gaps = 0/265 (0%)
Strand=Plus/Plus
Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531
|| ||||| || ||||| | |||||| || ||| | || || || || |||||
Sbjct 4673506 ATGTACGTGTCGATCAGCAGCGAGTACATCTCGCTGTGCACATTTTCCATCGCAATCTGG 4673565
Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591
|| || |||||||| || ||||||| | || || ||| | || |||||| ||||
Sbjct 4673566 AAGCCGTAGAAGCAGCGCGCCTCCGTAACCTGCACCTCCTGGCTGAAGCGTTCCACCAGA 4673625
Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651
||||| |||||||||||||| || ||||| || |||| | ||| |||||| |
Sbjct 4673626 TTCTCGTTCACGATACCGTCGGACGCGGCAAAGAAGGCCAGCACGTGGGAAATGAAGTGG 4673685
Query 16652 TTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCT 16711
|||| | | | || | ||| || || | ||| ||||| | ||| || |||||
Sbjct 4673686 CGTTCGCTCGGTTTCAGCGACTCCCAGTCCTTCATATCCTTGGACAGATCAACCTCTTCC 4673745
Query 16712 GGCGTCCAAAAGCTAGCCACTGCCT 16736
|||||||||| ||| | ||||
Sbjct 4673746 ACCGTCCAAAAGGAAGCTTCCGCCT 4673770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511347142613720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |