Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq7551 105 5e-18 >seq7551 Length=2192847 Score = 105 bits (116), Expect = 5e-18 Identities = 156/220 (71%), Gaps = 1/220 (0%) Strand=Plus/Minus Query 101753 GTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCT 101812 |||||||| || |||||| || | | || ||||| ||||||||||| ||||| || Sbjct 1924018 GTGACATGCGCGATCATGTGGGTCAGCAAGGAGTAGCTGGCAATGTTAAAGGGCACGCCC 1923959 Query 101813 AACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAA 101872 | || | || || || | |||||||| ||||| || |||| |||||||| || || Sbjct 1923958 AGACCTACGTCGGCCGAACGTTGATACATCTGACACGACAGCTCTCCATCACTAACGAAA 1923899 Query 101873 AATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAA 101932 || || || || || ||||| | |||| |||||||| || ||| ||||||| Sbjct 1923898 AACTGTGCCAAGCAGTGGCATGGCGGTAGTGCCATGTTAGGAATATCAGAAGGATTCCAA 1923839 Query 101933 GCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTA 101972 || ||||| | || | | ||| |||||| ||||| ||| Sbjct 1923838 GCGCACATGATGATTCGACGATC-GTAGGGATTGTTCTTA 1923800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361204878677771