Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_001697.1 Length=32355 Score E Sequences producing significant alignments: (Bits) Value seq7840 98.7 2e-16 >seq7840 Length=1700 Score = 98.7 bits (108), Expect = 2e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 356 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 415 |||||||||| | ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 589 TGGTGGGTCGGGCGAGATTCGAACTCGCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 530 Query 416 ACTGAGCTAACGACCCA 432 |||||||| ||||||| Sbjct 529 GCTGAGCTACCGACCCA 513 Score = 98.7 bits (108), Expect = 2e-16 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 356 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 415 |||||||||| | ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 778 TGGTGGGTCGGGCGAGATTCGAACTCGCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 719 Query 416 ACTGAGCTAACGACCCAAT 434 |||||||| |||||| || Sbjct 718 GCTGAGCTACCGACCCGAT 700 Score = 98.7 bits (108), Expect = 2e-16 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 356 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 415 |||||||||| | ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 968 TGGTGGGTCGGGCGAGATTCGAACTCGCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 909 Query 416 ACTGAGCTAACGACCCAAT 434 |||||||| |||||| || Sbjct 908 GCTGAGCTACCGACCCGAT 890 Score = 87.8 bits (96), Expect = 4e-13 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 356 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 415 |||||||| |||| | |||||| |||||| ||||||||| |||||||||||||||| Sbjct 672 TGGTGGGTTGTGAGTGGCTCGAACACTCGACCTACGGATTAAGAGTCCGCTGCTCTACCA 613 Query 416 ACTGAGCTAACGACCC 431 ||||||||||| |||| Sbjct 612 ACTGAGCTAACAACCC 597 Score = 87.8 bits (96), Expect = 4e-13 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 356 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 415 |||||||| |||| | |||||| |||||| ||||||||| |||||||||||||||| Sbjct 863 TGGTGGGTTGTGAGTGGCTCGAACACTCGACCTACGGATTAAGAGTCCGCTGCTCTACCA 804 Query 416 ACTGAGCTAACGACCC 431 ||||||||||| |||| Sbjct 803 ACTGAGCTAACAACCC 788 Score = 87.8 bits (96), Expect = 4e-13 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 356 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 415 |||||||| |||| | |||||| |||||| ||||||||| |||||||||||||||| Sbjct 1053 TGGTGGGTTGTGAGTGGCTCGAACACTCGACCTACGGATTAAGAGTCCGCTGCTCTACCA 994 Query 416 ACTGAGCTAACGACCC 431 ||||||||||| |||| Sbjct 993 ACTGAGCTAACAACCC 978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103401479728034