Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq7526 293 2e-74
seq7521 131 2e-25
seq7535 118 1e-21
seq7517 109 6e-19
>seq7526
Length=6110091
Score = 293 bits (324), Expect = 2e-74
Identities = 326/435 (75%), Gaps = 0/435 (0%)
Strand=Plus/Minus
Query 116946 TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCT 117005
|||| || |||||||| ||| |||||||||| || |||||| || ||||||||| ||
Sbjct 4673379 TGTTCAATGCCATCGAAACGCTGCCGTGCGTGAAGCGGAAGGCGGACTGGGCGCTGAACT 4673320
Query 117006 GGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGG 117065
||||| | ||| ||||| ||| |||||||| | ||||| ||||| || || ||||
Sbjct 4673319 GGATCTCGAGCAAGAAGGCCAACTTTGGCGAGCGGGTCGTGGCATTCGCTGCGGTTGAGG 4673260
Query 117066 GCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGC 117125
| ||||||| || || |||||||| || || ||||| ||||| || ||||| ||||
Sbjct 4673259 GTATCTTCTTCAGCGGTAGCTTCGCCGCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGC 4673200
Query 117126 CCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTG 117185
| || || || ||| |||||||| ||||| | ||||| || ||||| ||||||||||
Sbjct 4673199 CGGGACTCACCTTCTCGAACGAGCTGATCTCGCGCGACGAAGGGCTGCACTGCGACTTTG 4673140
Query 117186 CCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCG 117245
|||| || |||||||| || |||||||| ||| || |||||| | |||||||
Sbjct 4673139 CCTGCCTGATGTTCAAGTATCTGGTGCAGAAGCCGTCGAAGGAGCGCGTGACGGAGATCA 4673080
Query 117246 TCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGC 117305
|| ||| |||||| ||||||||| ||||| || | || ||||||||| | |||
Sbjct 4673079 TCCGCGATGCGGTCCTGATCGAGCAGGAGTTCCTGACGAAGGCACTGCCGGTGGATATGC 4673020
Query 117306 TGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGC 117365
|||| | || || || ||||||||| ||||| ||||| || ||||| | ||||||
Sbjct 4673019 TGGGCATGAACTGTGATCTGATGTCGCAGTACATTGAGTTTGTGGCCGATCGTTTGCTGC 4672960
Query 117366 TCGAGCTGGTCGGCG 117380
||||||||| | |||
Sbjct 4672959 TCGAGCTGGGCTGCG 4672945
Score = 210 bits (232), Expect = 2e-49
Identities = 218/283 (77%), Gaps = 2/283 (1%)
Strand=Plus/Minus
Query 116655 AGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACT 116714
|||| || || || || ||||| || || ||||| || ||||||||||| | || ||||
Sbjct 4673770 AGGCGGAAGCTTCCTTTTGGACGGTGGAAGAGGTTGATCTGTCCAAGGATATGAAGGACT 4673711
Query 116715 GGGAG-CGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCC 116773
||||| |||| ||| | ||| ||||| ||||| |||||||||||||| || |||
Sbjct 4673710 GGGAGTCGCTGAAACCG-AGCGAACGCCACTTCATTTCCCACGTGCTGGCCTTCTTTGCC 4673652
Query 116774 GCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTG 116833
|| |||||| ||||| |||||||||||||| || || ||| ||||||||||||||
Sbjct 4673651 GCGTCCGACGGTATCGTGAACGAGAATCTGGTGGAACGCTTCAGCCAGGAGGTGCAGGTT 4673592
Query 116834 GCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATG 116893
| |||||||| |||||||||||||| ||||| || ||||| || |||||| || |||
Sbjct 4673591 ACGGAGGCGCGCTGCTTCTACGGCTTCCAGATTGCGATGGAAAATGTGCACAGCGAGATG 4673532
Query 116894 TATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGA 116936
|| ||| || |||||||||||| | ||| ||| | ||||
Sbjct 4673531 TACTCGCTGCTGATCGACACGTACATCCGCGACTCGAAAGAGA 4673489
>seq7521
Length=12184106
Score = 131 bits (144), Expect = 2e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| ||||| |||||||| || ||||| ||| | || ||||| ||
Sbjct 8321115 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 8321174
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| || | | | | | |||| || || | ||||| || || ||||| | ||
Sbjct 8321175 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAAGGAATCCCGCCAGAT 8321234
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| || || |||| ||| ||||| |||||||| || | ||||| || |||||||
Sbjct 8321235 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGACTAC 8321294
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||||||||||||| | || || ||||| ||| ||||| || | || ||
Sbjct 8321295 AACATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCGCCTGCGCGGTGG 8321344
Score = 122 bits (134), Expect = 9e-23
Identities = 144/195 (74%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 40685 GAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAG 40744
|||| ||||| || ||||| ||||| ||||| ||||| |||||||| | || |||||
Sbjct 9381350 GAAACATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGC 9381291
Query 40745 CCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804
| | |||| | | | | |||| ||| || | ||||| || ||||| ||| | |
Sbjct 9381290 CTTCGGACACGATCGAGAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATTCCCCCAG 9381231
Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864
| ||||| || || |||| ||| ||||| |||||||| || | ||||| ||| |||||
Sbjct 9381230 ATCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACT 9381171
Query 40865 ACAACATCCAGAAGG 40879
||||||| |||||||
Sbjct 9381170 ACAACATTCAGAAGG 9381156
>seq7535
Length=3646130
Score = 118 bits (130), Expect = 1e-21
Identities = 155/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| || || || || ||||||||| |||| || || |||| |
Sbjct 876262 ATGCAGATTTTCGTGAAAACTCTGACCGGAAAGACCATCACCCTCGAGGTTGA-GCCATC 876204
Query 40750 GACAGCG--TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
| || || || | | |||| || || | ||||| ||||| ||||| | || |
Sbjct 876203 GGATACGATTGAGAATG-TGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATC 876145
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
|||| || || |||| ||| || || |||||||| || | |||||||| ||||| |
Sbjct 876144 AGCAGCGTCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTATA 876085
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||||| |||| || ||||| ||
Sbjct 876084 ACATCCAGAAGGAGTCCACCCTTCATCTGGT 876054
Score = 109 bits (120), Expect = 6e-19
Identities = 153/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| || || || || ||||||||| | || || || |||| |
Sbjct 876034 ATGCAGATTTTCGTGAAAACTCTGACCGGAAAGACCATCACCCTGGAAGTTGA-GCCATC 875976
Query 40750 GACAGCG--TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
| || || || | | |||| || || | ||||| ||||| ||||| | || |
Sbjct 875975 GGATACGATTGAGAATG-TGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATC 875917
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
|||| || || |||| ||| || || |||||||| || | |||||||| ||||| |
Sbjct 875916 AGCAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTATA 875857
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||||| | || || ||||| ||
Sbjct 875856 ACATCCAGAAGGAGTCTACTCTTCATCTGGT 875826
Score = 87.8 bits (96), Expect = 2e-12
Identities = 131/181 (72%), Gaps = 5/181 (3%)
Strand=Plus/Minus
Query 40720 AAAACCATCACCGTCGACGTCGAAGCCACCGACAGCG--TGCAAACGCTCAAGGAAAAAA 40777
|| ||||||||| |||| || || |||| || || || |||| | |||| || |
Sbjct 876459 AAGACCATCACC-TCGAAGTTGA-GCCATCGGATACGATTGAGAACG-TGAAGGCGAAGA 876403
Query 40778 TTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGC 40837
| | ||||| ||||| ||||| | || ||||| || || |||| ||| || || ||||
Sbjct 876402 TCCAGGACAAGGAGGGAATCCCGCCAGATCAGCAGCGTCTGATCTTCGCTGGAAAGCAGC 876343
Query 40838 TGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAG 40897
|||| || | |||||||| ||||| |||||||||||||| | || || ||||| |
Sbjct 876342 TGGAGGATGGCCGCACCCTGTCGGACTATAACATCCAGAAGGAATCGACCCTTCATCTGG 876283
Query 40898 T 40898
|
Sbjct 876282 T 876282
>seq7517
Length=11427604
Score = 109 bits (120), Expect = 6e-19
Identities = 148/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || ||||| || ||||| |||||||| | || ||||| | |
Sbjct 2898284 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACGCTGGAGGTCGAGCCGTCG 2898343
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | |||| || || | ||||| |||||||| || | || ||
Sbjct 2898344 GACACGATCGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCA 2898402
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || | |||| ||| || || |||||||| |||| || || || |||||||||
Sbjct 2898403 GCAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAAGACGGACGTACTCTGTCCGACTACAA 2898462
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | || ||||
Sbjct 2898463 CATCCAGAAGGAGTCGACCTTGCA 2898486
Score = 109 bits (120), Expect = 6e-19
Identities = 148/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || ||||| || ||||| |||||||| | || ||||| | |
Sbjct 2898512 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACGCTGGAGGTCGAGCCGTCG 2898571
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | |||| || || | ||||| |||||||| || | || ||
Sbjct 2898572 GACACGATCGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCA 2898630
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || | |||| ||| || || |||||||| |||| || ||| | |||||||||
Sbjct 2898631 GCAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAAGACGGACGTACCTTGTCCGACTACAA 2898690
Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892
||||||||||||| | || ||||
Sbjct 2898691 CATCCAGAAGGAGTCGACCTTGCA 2898714
Score = 107 bits (118), Expect = 2e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || ||||| || ||||| |||||||| | || ||||| | |
Sbjct 2898740 ATGCAGATCTTCGTGAAGACGCTGACTGGCAAGACCATCACGCTGGAGGTCGAGCCGTCG 2898799
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| | |||| || || | ||||| |||||||| || | || ||
Sbjct 2898800 GACACGATCGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGATCA 2898858
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || | |||| ||| || || |||||||| |||| || ||| | |||||||||
Sbjct 2898859 GCAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAAGACGGACGTACCTTGTCCGACTACAA 2898918
Query 40869 CATCCAGAAGGAG 40881
|||||||||||||
Sbjct 2898919 CATCCAGAAGGAG 2898931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515151442234960
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