Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq7551 100 2e-16 >seq7551 Length=2192847 Score = 100 bits (110), Expect = 2e-16 Identities = 152/215 (71%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 |||||||| |||||||| || | | || ||||| ||||||||||| ||||| || Sbjct 1924018 GTGACATGCGCGATCATGTGGGTCAGCAAGGAGTAGCTGGCAATGTTAAAGGGCACGCCC 1923959 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 || || | || || || | |||||| | |||||| || |||| |||||||| || || Sbjct 1923958 AGACCTACGTCGGCCGAACGTTGATACATCTGACACGACAGCTCTCCATCACTAACGAAA 1923899 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAA 97296 ||||| ||| || || || || | ||||| || |||| ||| | ||||||| Sbjct 1923898 AACTGTGCCAAGCAGTGGCATGGCGGTAGTGCCATGTTAGGAATATCAGAAGGATTCCAA 1923839 Query 97297 GCACACATCAACATTCTTCTATCGGTTGGGTTTGT 97331 || ||||| | |||| | ||| || ||| |||| Sbjct 1923838 GCGCACATGATGATTCGACGATC-GTAGGGATTGT 1923805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346739533729970