Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq7525 102 2e-16 >seq7525 Length=4038190 Score = 102 bits (112), Expect = 2e-16 Identities = 193/279 (69%), Gaps = 4/279 (1%) Strand=Plus/Plus Query 189435 AAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGC 189494 |||| ||||| ||| |||||| || | || |||||||||||| || || || |||| Sbjct 439804 AAACGCATGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGAAGGAGGGCAAGATGC 439863 Query 189495 ATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAG 189554 | | || | || ||||| ||||| || ||||| || || ||||| | ||| || || | Sbjct 439864 ACGGCTTCCTGCGCATGTACTGGGCCAAAAAGATCCTGGAGTGGACGAAAACGCCCGAGG 439923 Query 189555 ACGC-TTTGAGTTATAGTATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCT 189613 | || ||||| | |||||| ||||| | ||| || || || |||||| Sbjct 439924 AAGCGCTTGAGACGGCG-ATCTATCTGAACGATCGCTACAGTCTGGATGGGCGGGATCCG 439982 Query 189614 AACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGAT-AGAGCGTGGAAAGA 189672 ||||| ||||| ||||| |||||||| || || | |||||| || || ||||| || Sbjct 439983 AACGGGTACGTCGGTTGCATGTGGTCGATCGCGGGCATCCACGATCAGGGC-TGGAAGGA 440041 Query 189673 AAGACCGATATTTGGAAAGATAAGATATATGAATTATGA 189711 | || ||||| || || | || ||||| ||||| Sbjct 440042 GCGCGAAATCTTTGGTAAAATTCGGTACATGAACTATGA 440080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923075388080840