Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq7509 134 3e-26 >seq7509 Length=4842924 Score = 134 bits (148), Expect = 3e-26 Identities = 267/394 (68%), Gaps = 16/394 (4%) Strand=Plus/Plus Query 253997 CGACCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCT 254056 ||| || || || |||| | |||| || ||||| || || || || || ||||| Sbjct 1515228 CGATCTGCCGAATCTGCTGCTGTACGGACCACCCGGCACCGGTAAAACCAGCACAATCCT 1515287 Query 254057 GGCGCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAA 254116 |||| ||| || ||||| ||||| | || | |||||| | ||||||||||| Sbjct 1515288 GGCGGCGGCGAGACAGCTGTTCGGCGACATGTTCAAG---GAGCGCATTCTCGAGCTGAA 1515344 Query 254117 CGCTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCAAGAT 254176 || || ||||| || || | | ||| | ||| ||||| | || || ||| || || | Sbjct 1515345 TGCGTCGGACGACCGTGGCATTGCGGTCATTCGCAACAAGGTGAAAACGTTCGCCCAGCT 1515404 Query 254177 GTCG---------ATTTCGTCGTTCC--AACCCGGCTGTCCGCCTTTCAAGCTCGTGATC 254225 | || | | || | || || |||||| || ||||| |||| ||| Sbjct 1515405 GACGGCGAGCGGGACGCGGACGGACGGTAAGCC--CTGTCCACCGTTCAAAATCGTCATC 1515462 Query 254226 CTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAG 254285 ||||| ||||| ||| | |||||| || |||||| ||||||| ||||| ||||||||| Sbjct 1515463 CTGGATGAGGCCGACGCGATGACGCACGCAGCGCAGGCCGCCCTGCGCCGCACGATGGAG 1515522 Query 254286 ACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCC 254345 | | | | ||| || || || ||||||||||||||||||||| || |||| Sbjct 1515523 AAGGAAACGAAAACGACACGGTTCTGTCTGGTGTGCAACTACGTGTCGCGCATTATCGAA 1515582 Query 254346 CCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 ||| | | || || || |||||||||| |||| Sbjct 1515583 CCGATCACATCGCGCTGTACCAAGTTTCGCTTCA 1515616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073621655953728