Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 888 0.0
seq7526 181 9e-41
seq7535 111 1e-19
seq7521 98.7 9e-16
>seq7552
Length=2500597
Score = 888 bits (984), Expect = 0.0
Identities = 1369/1949 (70%), Gaps = 33/1949 (2%)
Strand=Plus/Plus
Query 22103 GTCTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATG 22162
||||||||||| |||||||| || || ||| ||||||| ||||| || ||||| ||||||
Sbjct 1134887 GTCTTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTACGCAGATAGTACATG 1134946
Query 22163 CCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTC 22222
|| || |||| ||||||||||| | || ||||| |||||||||| || ||||| |
Sbjct 1134947 CCAGTTTTCAACCCCATCTTCCAGCCATAGAAATGGATCGACGTCAGCTTGCCATAGTTT 1135006
Query 22223 GGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282
||| | | || | |||||||| || ||||||||||||||| || ||||| |||
Sbjct 1135007 GGCTCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCGCCACGATCTGCG 1135066
Query 22283 GCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATC 22342
||||| || || | || || ||| || |||||||| || |||||||| | | ||
Sbjct 1135067 GCCATTTTGATGCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGATCGCGAATT 1135126
Query 22343 TCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTT--T 22400
|| |||||| | | ||| | |||| || || || ||| || ||||| |
Sbjct 1135127 TCCTGCGGTATAGCCGCAATCTTTTGGATCGATCCATTGTTG-----GACAGAATTTCGT 1135181
Query 22401 TAATCGTATCG---TTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCA 22457
| || | ||| | ||||| ||| ||| ||||||||| | | |||||| ||||||
Sbjct 1135182 TCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCA 1135241
Query 22458 CCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGA 22517
|||| || |||||||| |||| ||||| | | ||||| ||| || ||| |||| ||||
Sbjct 1135242 CCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGA 1135301
Query 22518 AAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTA 22577
| ||||||||||| || || || || || || ||||| ||||||||||| |||||||| |
Sbjct 1135302 ACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCA 1135361
Query 22578 GCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGAT 22637
|||| || | | ||||||||| | || || ||| | | | ||||| ||||||||
Sbjct 1135362 GCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGAT 1135421
Query 22638 CGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGC 22697
| || || | |||| |||||| ||||| ||||| | ||| ||| |||| ||||
Sbjct 1135422 C---CGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTCACCGGACTGC 1135478
Query 22698 CTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGC 22757
| |||||||| ||||||||||||| | ||||| | || |||||||| |||| |||||
Sbjct 1135479 CCTCGTACGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGC 1135538
Query 22758 CGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACG 22817
|||| || || || ||||| |||| || || | | || | ||||||||||||
Sbjct 1135539 CGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACG 1135598
Query 22818 GCATA-CGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGG 22876
| ||| ||||||| | |||||| || ||||| ||||| ||||| || |||||||| | |
Sbjct 1135599 G-ATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCCTG 1135657
Query 22877 TTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTG 22936
| || ||| || || ||||| |||| ||||| |||| ||| || || ||
Sbjct 1135658 TGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTG 1135717
Query 22937 TTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCC 22996
|||| || | || || | || | | ||||||| ||
Sbjct 1135718 TTCAGATTGCGCGTTACGGTCTTAGCGACTTCCTTCAGCTTTGCAAAGTCATACGTTTTG 1135777
Query 22997 GATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCT 23056
||| |||||| |||| | |||||||||||| ||||||||||| || ||||| ||
Sbjct 1135778 TCTTGCTTTACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCTACCTCATCC 1135837
Query 23057 TTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTG 23116
|| |||| ||||||||||||||| || || | ||| ||| || || ||||| | |||
Sbjct 1135838 TTCGACGAGTACTCTACAATTTCAGTGCACAAGTTGGAACATTTGATGGTGCCGATATTC 1135897
Query 23117 CTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCG 23176
|||||| ||||| |||||||| | ||||||||| ||||||||||| ||| || ||
Sbjct 1135898 TGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGGTTTCC 1135957
Query 23177 ACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTG 23236
|||||||| ||||||||||| ||||| | ||| || | || | |||| | |
Sbjct 1135958 ACCTGCGATTCGATGATCGCAAACCACAGATCCTGCGCCTTCACCTGCCGCATAAAGCGA 1136017
Query 23237 CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGG 23296
|| |||| ||||||| ||||| | || || || | || | ||| | ||
Sbjct 1136018 CCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAGGTGTCCGATAGC 1136077
Query 23297 CCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATA 23356
||||| | | ||| ||||| |||||||||||| || || || || |||
Sbjct 1136078 CCGGGACAATCGTGCGGGCACATCAGACTCCACATTTCGTTCGCCTCCACACGCTGCATG 1136137
Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416
|| || ||||||||||| || ||||| |||| || || ||||| |||||||| ||||||
Sbjct 1136138 AACAGGTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACCTCCTCCTTGCCG 1136197
Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476
||||| || |||| ||| | ||| || || | || |||||||||||||||| || | |
Sbjct 1136198 GTGTTTTTCTTCAGATCGAGAAACTCGAATATATCACCATGCCACGGCTCGAGATAGATG 1136257
Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536
|| || || || || | ||| ||||| |||||||||||||| || ||||| ||||||||
Sbjct 1136258 GCGAATGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTATTGTTGTAG 1136317
Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCG--CCTACGCCCGCCACACTCGAAC 23594
|| | ||||||||||| |||||||| || ||| | || || | | || |
Sbjct 1136318 ACGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTA--CCGGAGATGTACGTTC 1136375
Query 23595 CTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCG 23654
| || || || | ||| |||| | || ||||| ||| |||| || || || | |
Sbjct 1136376 CCTTCGCGCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGACTTTGAAATTAGGG 1136435
Query 23655 CGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTC---TTTGGTCGCGACCA 23711
| || || ||||| ||||||||||||||||| ||||| || || ||||| | ||
Sbjct 1136436 CACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTC---AACA 1136492
Query 23712 AGAAACACGAAGACATTTG----CGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTG 23767
||| || || || | || |||| | || || |||| |||| || || |
Sbjct 1136493 GGAAGCAGGACGAAAGCTGGGGACGCT----GAGTGGCCGCCGCAAACATAGTTGGCGAG 1136548
Query 23768 GCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCC 23827
||||| |||||||| | | |||| |||||||| || ||||| || ||||| ||||||
Sbjct 1136549 GCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGATTGCTGCATCGATGTCC 1136608
Query 23828 TCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACG 23887
|| || || || || || || |||||||||| ||||| || || | |||||| |
Sbjct 1136609 TCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGATTTTT 1136668
Query 23888 CCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTA 23947
|| || || || | || ||||| |||| || |||||||| || ||||||| ||
Sbjct 1136669 CCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATAGTTGTACCCG 1136728
Query 23948 AAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCATTGGCAGCGATGATGTTG 24007
||||| ||||||| | |||||||| |||| |||| || || | || | |||
Sbjct 1136729 AAGTCGCGATCGTAAATGATGGCCGAGTTCAGCCGGTCGGCGTTATCCATTATCACCTTG 1136788
Query 24008 TAATGAAAATTCGATATCATCGGCGTTTT 24036
|||||||| | ||| ||||| || | |||
Sbjct 1136789 TAATGAAAGTCCGAGATCATGGGAGATTT 1136817
>seq7526
Length=6110091
Score = 181 bits (200), Expect = 9e-41
Identities = 300/432 (69%), Gaps = 6/432 (1%)
Strand=Plus/Minus
Query 57879 CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTCAATC 57935
|||||||| || |||||||| |||| | || ||| ||||| || ||| | |
Sbjct 4673380 CTGTTCAATGCCATCGAAACGCTGCC---GTGCGTGAAGCGGAAGGCGGACTGGGCGCTG 4673324
Query 57936 AAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTC 57995
|| ||||| ||| | ||||| || | |||| || | | || ||||| || ||
Sbjct 4673323 AACTGGATCTCGAGCAAGAAGGCCAACTTTGGCGAGCGGGTCGTGGCATTCGCTGCGGTT 4673264
Query 57996 GAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTG 58055
|| ||||| ||||| || ||||| || || || || ||| ||||||| || ||||||
Sbjct 4673263 GAGGGTATCTTCTTCAGCGGTAGCTTCGCCGCGATCTTCTGGCTGAAGAAGCGTGGCCTG 4673204
Query 58056 ATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGAT 58115
||||| || || || || |||||| |||| ||||||||||| || || || ||
Sbjct 4673203 ATGCCGGGACTCACCTTCTCGAACGAGCTGATCTCGCGCGACGAAGGGCTGCACTGCGAC 4673144
Query 58116 TTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGAC 58175
||||| ||||| |||| | | | || | || ||| || ||| ||| | |||
Sbjct 4673143 TTTGCCTGCCTGATGTTCAAGTATCTGGTGCAGAAGCCGTCGAAGGAGCGCGTGACGGAG 4673084
Query 58176 ATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCC 58235
|| ||| ||| |||||| |||||| | ||||| | || | || || |||||||
Sbjct 4673083 ATCATCCGCGATGCGGTCCTGATCGAGCAGGAGTTCCTGACGAAGGCACTGCCGGTGGAT 4673024
Query 58236 ATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTT 58295
||||| || |||||| |||| ||||||| |||||||||||||||| ||||| | |
Sbjct 4673023 ATGCTGGGCATGAACTGTGATCTGATGTCGCAGTACATTGAGTTTGTGGCCGATCGTTTG 4672964
Query 58296 TTGCTCGAACTG 58307
||||||| |||
Sbjct 4672963 CTGCTCGAGCTG 4672952
>seq7535
Length=3646130
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| || |||||||| || || || |||||| |||| ||||| || ||
Sbjct 876262 ATGCAGATTTTCGTGAAAACTCTGACCGGAAAGACCATCACCCTCGAGGTTGAGCCATCG 876203
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | || | || || || || ||||||||| || | ||||| || |||
Sbjct 876202 GATACGATTGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAG 876143
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || |||||||| || ||| |||| || || || || ||||||
Sbjct 876142 CAGCGTCTGATCTTCGCTGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTATAAC 876083
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || || || ||||||||||| || | ||| | || ||||
Sbjct 876082 ATCCAGAAGGAGTCCACCCTTCATCTGGTTCTCCGTCTGCGTGGTGGTA 876034
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| || |||||||| || || || |||||| | || ||||| || ||
Sbjct 876034 ATGCAGATTTTCGTGAAAACTCTGACCGGAAAGACCATCACCCTGGAAGTTGAGCCATCG 875975
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | || | || || || || ||||||||| || | ||||| || |||
Sbjct 875974 GATACGATTGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAG 875915
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||| || || ||| |||| || || || || ||||||
Sbjct 875914 CAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTATAAC 875855
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| || || || || |||||||||||||| ||| | ||| | || ||
Sbjct 875854 ATCCAGAAGGAGTCTACTCTTCATCTGGTTCTTCGTCTGCGTGGTGG 875808
Score = 86.0 bits (94), Expect = 6e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344
||||||||| || | ||||| || ||||||||||| || |||||||| || ||| ||||
Sbjct 876398 GGACAAGGAGGGAATCCCGCCAGATCAGCAGCGTCTGATCTTCGCTGGAAAGCAGCTGGA 876339
Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || || |||||||| || || |||||||| ||||||||||| ||
Sbjct 876338 GGATGGCCGCACCCTGTCGGACTATAACATCCAGAAGGAATCGACCCTTCATCTGGTTCT 876279
Query 31405 TAGACTGAGGGGCGGTA 31421
| ||| | || ||||
Sbjct 876278 CCGTCTGCGTGGTGGTA 876262
>seq7521
Length=12184106
Score = 98.7 bits (108), Expect = 9e-16
Identities = 167/242 (69%), Gaps = 4/242 (2%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| || ||||| || || || || || || || || ||| | || || || ||
Sbjct 8321115 AAGATGCAGATCTTCGTCAAAACCCTCACGGGTAAGACCATTACCCTTGAGGTCGAGCCC 8321174
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | |||| | || || || || |||||||||||| | ||||| ||
Sbjct 8321175 TCGGATACGATCGAGAATGTGAAGGCGAAGATCCAGGACAAGGAAGGAATCCCGCCAGAT 8321234
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
||||||||||| || ||||| ||||| ||| |||| || || || ||| ||
Sbjct 8321235 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTGTCCGACTAC 8321294
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAG 31425
||||| || || || ||||| ||||||||||| || | ||| | || ||| |||||
Sbjct 8321295 AACATCCAGAAGGAGTCGACCCTTCATCTGGTGCTGCGCCTGCGCGGTGGTGCCAAGAAG 8321354
Query 31426 CG 31427
||
Sbjct 8321355 CG 8321356
Score = 98.7 bits (108), Expect = 9e-16
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248
||||||||| |||||||| || || || || ||||| || ||||| | || || || ||
Sbjct 9381349 AAACATGCAGATTTTCGTGAAAACACTCACCGGCAAGACCATCACACTTGAGGTCGAGCC 9381290
Query 31249 GTCCGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307
|| |||| |||| | || || || ||| | ||||||||||||| | || || |
Sbjct 9381289 TTCGGACACGATCGAGAATGTGAAGGCAAAGA-TCCAGGACAAGGAAGGCATTCCCCCAG 9381231
Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367
| ||||||||||| || ||||| ||||| ||| |||| || | ||| | ||| |
Sbjct 9381230 ATCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACTCTCTCCGACT 9381171
Query 31368 ATAACATTCAAAA 31380
| |||||||| ||
Sbjct 9381170 ACAACATTCAGAA 9381158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445707776146320
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