Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq7552 370 2e-97 seq7526 109 8e-19 >seq7552 Length=2500597 Score = 370 bits (410), Expect = 2e-97 Identities = 1207/1854 (65%), Gaps = 32/1854 (2%) Strand=Plus/Plus Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798 || || || ||||| ||||||||||| || ||||| | || | |||| || |||||| Sbjct 1134920 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCATAGAAA 1134979 Query 78799 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 78858 || || ||| || ||| ||| | || || || | || || || | ||||| Sbjct 1134980 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 1135039 Query 78859 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 78918 |||||||| || || || | ||||| |||||||| ||| ||| || | || ||| Sbjct 1135040 TGATCGATAAACGCGCCACGATCTGCGGCCATTTTGATGCACGTTTTCACCGAGATCTCC 1135099 Query 78919 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTATTCT---GAATGGA 78974 || | ||||| || | |||| ||| || | || | | | ||| | || || Sbjct 1135100 CATACCGTTTTGTACAGATCGCG-AATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGA 1135158 Query 78975 TCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAA 79034 |||| | | || ||| ||||| || || || ||| | | | ||| || Sbjct 1135159 TCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAA 1135218 Query 79035 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 79094 | | || ||||| | || || || || || || || |||| || | || | |||| Sbjct 1135219 ATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTA 1135278 Query 79095 AATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGC 79154 || || || || || || | ||||||||| || || | |||||| || || || || Sbjct 1135279 AACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGC 1135338 Query 79155 CGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTT 79214 ||| ||||| || |||| || | ||| | || |||| ||| || || || Sbjct 1135339 CGTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTT 1135398 Query 79215 TAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAAT 79274 | |||| | ||| ||||| | ||| | ||||| | || || || | || Sbjct 1135399 CAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGAT 1135458 Query 79275 ACCGTTACT-AGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATT 79333 || || || | || | ||| ||| || || || || || || |||| || | Sbjct 1135459 GCCCTTGCTCACCGGACTGCCCTC-GTACGTCTCGTACGGACCATCTCGAGCGGCCAACT 1135517 Query 79334 CACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTT 79393 |||| ||||| || | || ||||| || ||||||||||| || | || ||| || | || Sbjct 1135518 CACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTT 1135577 Query 79394 GTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 79453 | || ||| ||| || | ||||| | || || ||||| || || | || || | Sbjct 1135578 GAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCA 1135637 Query 79454 CACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAAT 79513 | || || ||||| || || || | | |||| || | ||| || || | ||||| | Sbjct 1135638 CGCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGT 1135697 Query 79514 AATTAATATCTATAATTTTATTGAGATTCC---TGACTATTACTTTGACCACATCCTTTA 79570 |||| | ||| || ||||| || ||||| | | || | ||| | | || ||||| | Sbjct 1135698 AATTGACATCAATGATTTTGTTCAGATTGCGCGTTACGGT--CTTAG-CGACTTCCTTCA 1135754 Query 79571 GTTTGAGAAAATCAAA----TCGTCCATCTATTACAAACATGTTCAACGCGACAGATGCC 79626 | || ||| ||| | | ||| || |||||||||||||||| |||| || ||| Sbjct 1135755 GCTTTGCAAAGTCATACGTTTTGTCTTGCT-TTACAAACATGTTCAAGGCGATCGAGGCC 1135813 Query 79627 AGATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATTTCAGTGCAGAGGT 79684 ||||| || || |||||||||| | || || || | || ||||||||||| | || Sbjct 1135814 AGATTGCATACCGCTACCTCATC--CTTCGACGAGTACTCTACAATTTCAGTGCACAAGT 1135871 Query 79685 TACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 79744 | ||| || ||||| || | ||| || || ||||| || || || |||||||| | Sbjct 1135872 TGGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGT 1135931 Query 79745 AAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 79804 | || ||| |||| || ||||| | ||| ||||| || ||||| ||| | | Sbjct 1135932 ACAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCT 1135991 Query 79805 GAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATT--GTGTATATAATCGTTC 79862 | ||||| | | | | | ||| | ||||| ||||| | || || Sbjct 1135992 GCGCCTTCACCTGCCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTC--TC 1136049 Query 79863 GAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCA 79922 |||||| || ||||| || || || ||||| |||| || ||||||| ||| Sbjct 1136050 GAACTCTTCGCCCCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGACTCCA 1136109 Query 79923 CTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 79982 | | | | ||| || || | ||| || || || || ||||| || || |||| | Sbjct 1136110 CATTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCG-TAAA-AC 1136167 Query 79983 ATCTCTGGTTCTATG--CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 || || || | | |||||| || || || || || || |||||||| ||| | | Sbjct 1136168 ATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAAT 1136227 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 |||||| ||||||||| || | || ||||| | |||| || || ||||| || ||| Sbjct 1136228 ATATCACCATGCCACGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCC 1136287 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 ||||| | ||| | || || || || || || | || ||| || | | ||| || || Sbjct 1136288 TGATCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAA 1136347 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACC 80219 | || || || |||||||| || |||| | || || ||| | | | | || || Sbjct 1136348 ATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGGATAC-AGTGCACGTTCAGTCC 1136406 Query 80220 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 80279 || || || ||| || || |||| || || | || | ||| || ||||||||||| Sbjct 1136407 GATGCCACCGGCCGACTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTC 1136466 Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 80339 |||||||| || |||| | | || || ||| || | ||| |||| ||| | Sbjct 1136467 AATGCTATCTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGAGTGGC 1136526 Query 80340 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGT 80399 ||| ||| | || || || ||||| ||||| | || ||||| |||||||| || Sbjct 1136527 CGCCGCAAACATAGTTGGCGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGT 1136586 Query 80400 CTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTG 80459 ||| || |||| || || ||| ||| || || | || || ||||| | |||||| Sbjct 1136587 CTCGATTGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTG 1136646 Query 80460 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTT 80519 ||| || | || ||||| || || || |||| |||||| ||| |||||| ||||| Sbjct 1136647 CTGGGGGCGCTCGACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTT 1136706 Query 80520 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573 ||| || ||||||||||| ||||| || |||||||| || ||||||| || Sbjct 1136707 AAAGCCGAAATAGTTGTACCCGAAGTCGCGATCGTAAATGATGGCCGAGTTCAG 1136760 >seq7526 Length=6110091 Score = 109 bits (120), Expect = 8e-19 Identities = 181/259 (70%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 49948 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007 || ||||||| || || || ||||||||||| || ||||| | || || ||||| Sbjct 4673124 TTGAACATCAGGCAGGCAAAGTCGCAGTGCAGCCCTTCGTCGCGCGAGATCAGCTCGTTC 4673183 Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC 50067 || || |||||||| ||||| ||||||||||| || ||||| || || | || || Sbjct 4673184 GAGAAGGTGAGTCCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGCGGCGAAGCTA 4673243 Query 50068 CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG 50127 || |||||||| || || || || || || || || | | ||| ||| | |||| Sbjct 4673244 CCGCTGAAGAAGATACCCTCAACCGCAGCGAATGCCACGACCCGCTCGCCAAAGTTGGC- 4673302 Query 50128 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 50182 || || || ||||| || | ||||| || |||||| || || || |||| || Sbjct 4673303 CT-TCTTGCTCGAGATCCAGTTCAGCGCCCAGTCCGCCTTCCGCTTCACGCACGGCAGCG 4673361 Query 50183 TTTCTATGGCATTAAAGAG 50201 |||| |||||||| || || Sbjct 4673362 TTTCGATGGCATTGAACAG 4673380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718174338674440