Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 370 2e-97
seq7526 109 8e-19
>seq7552
Length=2500597
Score = 370 bits (410), Expect = 2e-97
Identities = 1207/1854 (65%), Gaps = 32/1854 (2%)
Strand=Plus/Plus
Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798
|| || || ||||| ||||||||||| || ||||| | || | |||| || ||||||
Sbjct 1134920 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCATAGAAA 1134979
Query 78799 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 78858
|| || ||| || ||| ||| | || || || | || || || | |||||
Sbjct 1134980 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 1135039
Query 78859 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 78918
|||||||| || || || | ||||| |||||||| ||| ||| || | || |||
Sbjct 1135040 TGATCGATAAACGCGCCACGATCTGCGGCCATTTTGATGCACGTTTTCACCGAGATCTCC 1135099
Query 78919 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTATTCT---GAATGGA 78974
|| | ||||| || | |||| ||| || | || | | | ||| | || ||
Sbjct 1135100 CATACCGTTTTGTACAGATCGCG-AATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGA 1135158
Query 78975 TCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAA 79034
|||| | | || ||| ||||| || || || ||| | | | ||| ||
Sbjct 1135159 TCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAA 1135218
Query 79035 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 79094
| | || ||||| | || || || || || || || |||| || | || | ||||
Sbjct 1135219 ATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTA 1135278
Query 79095 AATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGC 79154
|| || || || || || | ||||||||| || || | |||||| || || || ||
Sbjct 1135279 AACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGC 1135338
Query 79155 CGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTT 79214
||| ||||| || |||| || | ||| | || |||| ||| || || ||
Sbjct 1135339 CGTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTT 1135398
Query 79215 TAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAAT 79274
| |||| | ||| ||||| | ||| | ||||| | || || || | ||
Sbjct 1135399 CAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGAT 1135458
Query 79275 ACCGTTACT-AGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATT 79333
|| || || | || | ||| ||| || || || || || || |||| || |
Sbjct 1135459 GCCCTTGCTCACCGGACTGCCCTC-GTACGTCTCGTACGGACCATCTCGAGCGGCCAACT 1135517
Query 79334 CACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTT 79393
|||| ||||| || | || ||||| || ||||||||||| || | || ||| || | ||
Sbjct 1135518 CACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTT 1135577
Query 79394 GTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAA 79453
| || ||| ||| || | ||||| | || || ||||| || || | || || |
Sbjct 1135578 GAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCA 1135637
Query 79454 CACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAAT 79513
| || || ||||| || || || | | |||| || | ||| || || | ||||| |
Sbjct 1135638 CGCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGT 1135697
Query 79514 AATTAATATCTATAATTTTATTGAGATTCC---TGACTATTACTTTGACCACATCCTTTA 79570
|||| | ||| || ||||| || ||||| | | || | ||| | | || ||||| |
Sbjct 1135698 AATTGACATCAATGATTTTGTTCAGATTGCGCGTTACGGT--CTTAG-CGACTTCCTTCA 1135754
Query 79571 GTTTGAGAAAATCAAA----TCGTCCATCTATTACAAACATGTTCAACGCGACAGATGCC 79626
| || ||| ||| | | ||| || |||||||||||||||| |||| || |||
Sbjct 1135755 GCTTTGCAAAGTCATACGTTTTGTCTTGCT-TTACAAACATGTTCAAGGCGATCGAGGCC 1135813
Query 79627 AGATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATTTCAGTGCAGAGGT 79684
||||| || || |||||||||| | || || || | || ||||||||||| | ||
Sbjct 1135814 AGATTGCATACCGCTACCTCATC--CTTCGACGAGTACTCTACAATTTCAGTGCACAAGT 1135871
Query 79685 TACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 79744
| ||| || ||||| || | ||| || || ||||| || || || |||||||| |
Sbjct 1135872 TGGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGT 1135931
Query 79745 AAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 79804
| || ||| |||| || ||||| | ||| ||||| || ||||| ||| | |
Sbjct 1135932 ACAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCT 1135991
Query 79805 GAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATT--GTGTATATAATCGTTC 79862
| ||||| | | | | | ||| | ||||| ||||| | || ||
Sbjct 1135992 GCGCCTTCACCTGCCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTC--TC 1136049
Query 79863 GAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCA 79922
|||||| || ||||| || || || ||||| |||| || ||||||| |||
Sbjct 1136050 GAACTCTTCGCCCCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGACTCCA 1136109
Query 79923 CTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 79982
| | | | ||| || || | ||| || || || || ||||| || || |||| |
Sbjct 1136110 CATTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCG-TAAA-AC 1136167
Query 79983 ATCTCTGGTTCTATG--CTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040
|| || || | | |||||| || || || || || || |||||||| ||| | |
Sbjct 1136168 ATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAAT 1136227
Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100
|||||| ||||||||| || | || ||||| | |||| || || ||||| || |||
Sbjct 1136228 ATATCACCATGCCACGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCC 1136287
Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160
||||| | ||| | || || || || || || | || ||| || | | ||| || ||
Sbjct 1136288 TGATCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGAA 1136347
Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACC 80219
| || || || |||||||| || |||| | || || ||| | | | | || ||
Sbjct 1136348 ATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGGATAC-AGTGCACGTTCAGTCC 1136406
Query 80220 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 80279
|| || || ||| || || |||| || || | || | ||| || |||||||||||
Sbjct 1136407 GATGCCACCGGCCGACTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTC 1136466
Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 80339
|||||||| || |||| | | || || ||| || | ||| |||| ||| |
Sbjct 1136467 AATGCTATCTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGAGTGGC 1136526
Query 80340 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGT 80399
||| ||| | || || || ||||| ||||| | || ||||| |||||||| ||
Sbjct 1136527 CGCCGCAAACATAGTTGGCGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGT 1136586
Query 80400 CTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTG 80459
||| || |||| || || ||| ||| || || | || || ||||| | ||||||
Sbjct 1136587 CTCGATTGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTG 1136646
Query 80460 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTT 80519
||| || | || ||||| || || || |||| |||||| ||| |||||| |||||
Sbjct 1136647 CTGGGGGCGCTCGACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTT 1136706
Query 80520 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573
||| || ||||||||||| ||||| || |||||||| || ||||||| ||
Sbjct 1136707 AAAGCCGAAATAGTTGTACCCGAAGTCGCGATCGTAAATGATGGCCGAGTTCAG 1136760
>seq7526
Length=6110091
Score = 109 bits (120), Expect = 8e-19
Identities = 181/259 (70%), Gaps = 7/259 (3%)
Strand=Plus/Plus
Query 49948 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007
|| ||||||| || || || ||||||||||| || ||||| | || || |||||
Sbjct 4673124 TTGAACATCAGGCAGGCAAAGTCGCAGTGCAGCCCTTCGTCGCGCGAGATCAGCTCGTTC 4673183
Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC 50067
|| || |||||||| ||||| ||||||||||| || ||||| || || | || ||
Sbjct 4673184 GAGAAGGTGAGTCCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGCGGCGAAGCTA 4673243
Query 50068 CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG 50127
|| |||||||| || || || || || || || || | | ||| ||| | ||||
Sbjct 4673244 CCGCTGAAGAAGATACCCTCAACCGCAGCGAATGCCACGACCCGCTCGCCAAAGTTGGC- 4673302
Query 50128 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 50182
|| || || ||||| || | ||||| || |||||| || || || |||| ||
Sbjct 4673303 CT-TCTTGCTCGAGATCCAGTTCAGCGCCCAGTCCGCCTTCCGCTTCACGCACGGCAGCG 4673361
Query 50183 TTTCTATGGCATTAAAGAG 50201
|||| |||||||| || ||
Sbjct 4673362 TTTCGATGGCATTGAACAG 4673380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718174338674440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |