Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 338 8e-88
seq7526 91.5 2e-13
>seq7552
Length=2500597
Score = 338 bits (374), Expect = 8e-88
Identities = 1218/1890 (64%), Gaps = 42/1890 (2%)
Strand=Plus/Plus
Query 70791 CTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCC 70850
|||||||| |||||||| || | | || | || ||||| ||||||||||||||
Sbjct 1134889 CTTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTACGCAGATAGTACATGCC 1134948
Query 70851 TGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGG 70910
||||| | || | |||| || || ||||| || ||| || ||| |||| | ||
Sbjct 1134949 AGTTTTCAACCCCATCTTCCAGCCATAGAAATGGATCGACGTCAGCTTGCCATAGTTTGG 1135008
Query 70911 ATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGC 70970
|| || | |||||| || | ||| || |||||||| || || || | ||||| ||
Sbjct 1135009 CTCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCGCCACGATCTGCGGC 1135068
Query 70971 CATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC-TCGCTTAATAT 71029
|||||| ||| ||| || | || ||||| | ||||| || | |||| ||| |
Sbjct 1135069 CATTTTGATGCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGATCGCG-AATTT 1135127
Query 71030 CTTCTGGAAGGTTTGTATTCT---GAATGGATCCACCATCTGCAATAATCCTATTTTTGA 71086
| | || | | | ||| | || |||||| | | | ||| || || |
Sbjct 1135128 CCTGCGGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCA 1135187
Query 71087 TCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTT 71146
| || || ||| | | | ||| ||| | || |||||| | || || || |
Sbjct 1135188 TGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCACCT 1135247
Query 71147 GAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACT 71206
| || || || |||| || | | | |||||| || || ||||| || | || |
Sbjct 1135248 GGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGATT 1135307
Query 71207 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTAT 71266
|||| || || | |||||| || || || || |||||||| || |||| || || ||
Sbjct 1135308 CATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAAT 1135367
Query 71267 TTCTAAGACCATGTGATCGG--ATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGA 71324
| | || || ||| | || || || || || | |||| ||||| |||||||
Sbjct 1135368 TGCGAATGCC--GTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGATCCGT 1135425
Query 71325 TGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACT-AGCGTATGATCCTGCAT 71383
||| | ||||| || || | || | ||| | |
Sbjct 1135426 CGGTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTCACCGGACTGCCCT-CGT 1135484
Query 71384 ATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAAT 71443
| || ||||| || || ||| |||| | ||||| ||||| || | || || || |
Sbjct 1135485 ACGTCTCGTACGGACCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGCCGTAGT 1135544
Query 71444 AAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAAT 71503
| ||||||||||| || | || ||| || | ||| || || ||| || | |||||
Sbjct 1135545 AGATGGTTTCGAATATTTGCTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGGATAGC 1135604
Query 71504 TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCT 71563
| || || ||||| || || | || || ||||| || ||||| || ||||| | |
Sbjct 1135605 GCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCCTGTGGCGCA 1135664
Query 71564 TATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 71623
|||| || | ||| || || | ||||| ||||| | ||| || ||||| || ||||
Sbjct 1135665 TATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTGTTCAGAT 1135724
Query 71624 TTC---TGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATCTA 71680
| | | || | ||| | | || ||||| || || ||| ||| | | |||
Sbjct 1135725 TGCGCGTTACGGT--CTTAG-CGACTTCCTTCAGCTTTGCAAAGTCATACGTTTTGTCTT 1135781
Query 71681 ---TTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCAT 71737
||||||||| ||||||||| | || |||||||| || || |||||||||| | |
Sbjct 1135782 GCTTTACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCTACCTCATC--CTT 1135839
Query 71738 CGGCA--TATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 71795
|| | || | || |||||||||||| | || ||| |||||||| || | ||| ||
Sbjct 1135840 CGACGAGTACTCTACAATTTCAGTGCACAAGTTGGAACATTTGATGGTGCCGATATTCTG 1135899
Query 71796 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAAT 71855
|| ||||| || || || |||||||| || || || |||| || ||||| |
Sbjct 1135900 CTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGGTTTCCAC 1135959
Query 71856 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTT 71915
||| ||||| || ||||| ||| | | | ||||| | | | | |
Sbjct 1135960 CTGCGATTCGATGATCGCAAACCACAGATCCTGCGCCTTCACCTGCCGCATAAAGCGACC 1136019
Query 71916 TTCTCTTTCGTATT--GTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAAT 71973
||| | ||||| ||||| | || |||||||| || ||||| | |||| ||
Sbjct 1136020 CTCTTTCTCGTACCCCGTGTACAGCTTC--TCGAACTCTTCGCCCCAGG---TGTCCGAT 1136074
Query 71974 ---CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTC 72030
|| ||||| || | ||| ||||||| |||| | | | | | || || | |
Sbjct 1136075 AGCCCGGGACAATCGTGCGGGCACATCAGACTCCACATTTCGTTCGCCTCCACACGCTGC 1136134
Query 72031 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG--CTCCTCGT 72088
|| || || || || ||||| || || |||| | || || || | | |||||| |
Sbjct 1136135 ATGAACAGGTCCGGTATCCAGAGTGCG-TAAA-ACATGTCCCGTGCGCGGACCTCCTCCT 1136192
Query 72089 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 72148
| || || || || || |||||||| ||| | | |||||| ||||||||| || | |
Sbjct 1136193 TGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATATCACCATGCCACGGCTCGAGAT 1136252
Query 72149 ATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 72208
| ||||| | |||| ||||| ||||| || |||||||| | ||| | || || || |
Sbjct 1136253 AGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTATTGT 1136312
Query 72209 TATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGC 72268
| || || | || ||| || | | ||| || || || || || |||||||| ||
Sbjct 1136313 TGTAGACGCGCAGCATCGGCACCAGACCGTTCGAAATCCCGTTCGTACCGGAGATGTACG 1136372
Query 72269 TTCCACTGGCACGAATAT--TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 72326
|||| | || || ||| ||| || | | || || || || ||| || || ||
Sbjct 1136373 TTCCCTTCGCGCGGATACAGTGCACGTTCA--GTCCGATGCCACCGGCCGACTTTGAAAT 1136430
Query 72327 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 72386
|| || || | || | ||| || ||||||||||| || ||||| || |||| | |
Sbjct 1136431 TAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTCAA 1136490
Query 72387 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 72446
|| || ||| || | ||| |||| ||| |||| ||| | || || || ||
Sbjct 1136491 CAGGAAGCAGGACGAAAGCTGGGGACGCTGAGTGGCCGCCGCAAACATAGTTGGCGAGGC 1136550
Query 72447 GTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCA 72506
||| ||||| | || ||||| |||||||| ||||| || |||| || || |||
Sbjct 1136551 GTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGTCTCGATTGCTGCATCGATGTCCTC 1136610
Query 72507 TTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTT 72566
||| || || | || || ||||| | ||| ||||| || | || ||||| ||
Sbjct 1136611 GCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGATTTTTCC 1136670
Query 72567 ATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 72626
|| || |||| |||||| ||| |||||| |||||||| || ||||||||||| ||
Sbjct 1136671 CTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATAGTTGTACCCGAA 1136730
Query 72627 GTCTCGTTCGTAAATAATAACCGAATTGAG 72656
||| || |||||||| || |||| || ||
Sbjct 1136731 GTCGCGATCGTAAATGATGGCCGAGTTCAG 1136760
>seq7526
Length=6110091
Score = 91.5 bits (100), Expect = 2e-13
Identities = 177/259 (68%), Gaps = 7/259 (3%)
Strand=Plus/Plus
Query 42053 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTG 42112
|| ||||||| || || || ||||||||||| || || || | || | |||||
Sbjct 4673124 TTGAACATCAGGCAGGCAAAGTCGCAGTGCAGCCCTTCGTCGCGCGAGATCAGCTCGTTC 4673183
Query 42113 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT 42172
|| || |||||||| ||||| ||||||||||| || ||||| || || | || ||
Sbjct 4673184 GAGAAGGTGAGTCCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGCGGCGAAGCTA 4673243
Query 42173 CCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA 42232
|| |||||||| || || || || || || || | | | ||| ||| | |||
Sbjct 4673244 CCGCTGAAGAAGATACCCTCAACCGCAGCGAATGCCACGACCCGCTCGCCAAAGTTGGC- 4673302
Query 42233 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 42287
|| || || ||||| || | ||||| || |||||| || || || |||| ||
Sbjct 4673303 CT-TCTTGCTCGAGATCCAGTTCAGCGCCCAGTCCGCCTTCCGCTTCACGCACGGCAGCG 4673361
Query 42288 TTTCTATGGCATTAAAGAG 42306
|||| |||||||| || ||
Sbjct 4673362 TTTCGATGGCATTGAACAG 4673380
Score = 91.5 bits (100), Expect = 2e-13
Identities = 154/223 (69%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 42374 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTA 42433
||||| || || ||||| || |||||||| || | ||||| |||||||| || ||
Sbjct 4673548 TTTTCCATCGCAATCTGGAAGCCGTAGAAGCAGCGCGCCTCCGTAACCTGCACCTCCTGG 4673607
Query 42434 CAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAAT 42493
| || ||||| | | ||| |||||||| || ||||| || ||||| || ||||
Sbjct 4673608 CTGAAGCGTTCCACCAGATTCTCGTTCACGATACCGTCGGACGCGGCAAAGAAGGCCAGC 4673667
Query 42494 ACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTGATATCTTTA 42553
|| || || || | |||| |||| | | | ||| || || ||||| ||
Sbjct 4673668 ACGTGGGAAATGAAGTGGCGTTCGCTCGGTTTCAGCGACTCCCAGTCCTTCATATCCTTG 4673727
Query 42554 GATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCT 42596
|| | ||| || ||||| ||||||||||| || ||||| ||||
Sbjct 4673728 GACAGATCAACCTCTTCCACCGTCCAAAAGGAAGCTTCCGCCT 4673770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671050936805960
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