Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_004928.1 Length=167560 Score E Sequences producing significant alignments: (Bits) Value seq236 105 7e-18 >seq236 Length=1144 Score = 105 bits (116), Expect = 7e-18 Identities = 255/382 (67%), Gaps = 8/382 (2%) Strand=Plus/Minus Query 142242 TTTCAGAACTAATAGGTTCTCTACTTCTAAGTGCCACATTGGATAATACGCTGTAGCAGC 142301 |||||| || | ||| | || ||||| | |||||||| || || || || ||||| Sbjct 1144 TTTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGC 1085 Query 142302 ACCACCACGAATACCACCTTGAGAACAAGATTTTACTGCAGTTTGGAAATGTTTCCAGAA 142361 ||||||||| | || || ||||| || |||||||| || || |||||||| || |||| Sbjct 1084 ACCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAA 1025 Query 142362 TGGAATAACACCCGTATGTCGAACTTCACCCATACCG---ATCTTAGAACCTTCTGCACG 142418 ||||| || ||||| | |||| || |||| ||| ||| ||||| Sbjct 1024 CGGAATGCAGCCGGTATGGAAAGCTTCTCC---ACCGCGAATCGGGCTACCCAACGCACG 968 Query 142419 AAGCATACCAACGTTGATACCGATACCAGCTCGTTTAGAAATATATTCAATAATTGATGC 142478 | || ||||||| ||||| || || |||| |||| |||| | ||| | Sbjct 967 GATGCGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCT 908 Query 142479 TGAAGTTTTGTTAATAGATTTTAACGAATCACCGGCTTCAATAACTACACAACTAGAGAA 142538 ||| || ||||| || | | |||||| ||| || | ||||| ||| Sbjct 907 TGAGGTGGCATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAA 848 Query 142539 CTGGCGAGTTGGAGTACGAGCACCTGCCATAATTGGGGTTGGCAATGAAA-CTTGATGAG 142597 ||| || ||||| ||||| | || | ||| ||||| || |||| |||| |||| | | Sbjct 847 CTGACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTTGAAG-G 789 Query 142598 TAGAAACGGCATCATAAAAACG 142619 |||||| ||| ||||| ||||| Sbjct 788 TAGAAATGGCGTCATAGAAACG 767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535993500883200