Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_004928.1
Length=167560
Score E
Sequences producing significant alignments: (Bits) Value
seq236 105 7e-18
>seq236
Length=1144
Score = 105 bits (116), Expect = 7e-18
Identities = 255/382 (67%), Gaps = 8/382 (2%)
Strand=Plus/Minus
Query 142242 TTTCAGAACTAATAGGTTCTCTACTTCTAAGTGCCACATTGGATAATACGCTGTAGCAGC 142301
|||||| || | ||| | || ||||| | |||||||| || || || || |||||
Sbjct 1144 TTTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGC 1085
Query 142302 ACCACCACGAATACCACCTTGAGAACAAGATTTTACTGCAGTTTGGAAATGTTTCCAGAA 142361
||||||||| | || || ||||| || |||||||| || || |||||||| || ||||
Sbjct 1084 ACCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAA 1025
Query 142362 TGGAATAACACCCGTATGTCGAACTTCACCCATACCG---ATCTTAGAACCTTCTGCACG 142418
||||| || ||||| | |||| || |||| ||| ||| |||||
Sbjct 1024 CGGAATGCAGCCGGTATGGAAAGCTTCTCC---ACCGCGAATCGGGCTACCCAACGCACG 968
Query 142419 AAGCATACCAACGTTGATACCGATACCAGCTCGTTTAGAAATATATTCAATAATTGATGC 142478
| || ||||||| ||||| || || |||| |||| |||| | ||| |
Sbjct 967 GATGCGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCT 908
Query 142479 TGAAGTTTTGTTAATAGATTTTAACGAATCACCGGCTTCAATAACTACACAACTAGAGAA 142538
||| || ||||| || | | |||||| ||| || | ||||| |||
Sbjct 907 TGAGGTGGCATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAA 848
Query 142539 CTGGCGAGTTGGAGTACGAGCACCTGCCATAATTGGGGTTGGCAATGAAA-CTTGATGAG 142597
||| || ||||| ||||| | || | ||| ||||| || |||| |||| |||| | |
Sbjct 847 CTGACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGAGAAATTTTGAAG-G 789
Query 142598 TAGAAACGGCATCATAAAAACG 142619
|||||| ||| ||||| |||||
Sbjct 788 TAGAAATGGCGTCATAGAAACG 767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 535993500883200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |