Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_005260.1
Length=233234
Score E
Sequences producing significant alignments: (Bits) Value
seq236 145 1e-29
>seq236
Length=1144
Score = 145 bits (160), Expect = 1e-29
Identities = 238/343 (69%), Gaps = 0/343 (0%)
Strand=Plus/Minus
Query 43687 TTTCAGAACAAGGATTTTTTCAACTTCAAGATGCCACATTGGATAGTAAAGAGTAGCAGC 43746
|||||| || || | |||| ||||| ||||||||||| || ||| | | || |||||
Sbjct 1144 TTTCAGCACCAGCAGGCTTTCGACTTCCAGATGCCACATCGGGTAGAACAACGTGGCAGC 1085
Query 43747 GCCACCGCGTACACCACCCTGTGAGCAACTTTTTACCGCAGTCTGGAAATATTTCCAGAA 43806
||||| || || || ||||| ||||| |||||| || |||||||||| || ||||
Sbjct 1084 ACCACCACGCACGCCGCCCTGAGAGCAGGATTTTACGGCGGTCTGGAAATGCTTGTAGAA 1025
Query 43807 CGGAATAATACCAGTGTGGCGAACTTCACCACTTCGAATGCGAGAACCTTCGGCACGAAT 43866
|||||| || || ||| | |||| |||| ||||| | ||| ||||| ||
Sbjct 1024 CGGAATGCAGCCGGTATGGAAAGCTTCTCCACCGCGAATCGGGCTACCCAACGCACGGAT 965
Query 43867 AGCGCCACCGTTGATACCGATACCAGCGCGTTTGCTAATATAGTCAACGATTGAACTTGC 43926
||| ||||||| ||||| || || |||| | || || | || || | ||||
Sbjct 964 GCGGCCCGCGTTGATGCCGATCCCCGCACGTTGGGAAACGTATTTCACAATGGCGCTTGA 905
Query 43927 GGTAGCGTTAATGCTATCGAGTTCGTCGCCGCTTTCGATCTTCACGCATGAGCTAAACTG 43986
||| || ||||| ||| || || || | ||||||| ||| || ||||| |||||
Sbjct 904 GGTGGCATTAATCGAATCCAGGCTATCACCACATTCGATCAGCACACAGGAGCTGAACTG 845
Query 43987 GCGAGTCGGGGTTCGAACACCAGCAAGAATTGGCGTCGGTAGA 44029
|| || || || || || |||| | |||||||| || |||
Sbjct 844 ACGGGTTGGCGTACGCACGCCAGACATGATTGGCGTAGGCAGA 802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 746122662637040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |