Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq7525 125 2e-23 >seq7525 Length=4038190 Score = 125 bits (138), Expect = 2e-23 Identities = 224/322 (70%), Gaps = 4/322 (1%) Strand=Plus/Plus Query 238566 GAGAGAGCCGAAACTCACGATCCCCTATGGAATTCCGCCCAGATACAAATGGTAAGACTA 238625 |||| ||| |||| || || || ||||| || |||||| | || ||||| | Sbjct 439794 GAGACGGCCAAAACGCATGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGAAGGAG 439853 Query 238626 GGCAAAATGCATAGTTTCTTACGAATGTATTGGGCTAAAAAGATACTTGAATGGACTAGA 238685 ||||| ||||| | ||| | || ||||| ||||| |||||||| || || ||||| | | Sbjct 439854 GGCAAGATGCACGGCTTCCTGCGCATGTACTGGGCCAAAAAGATCCTGGAGTGGACGAAA 439913 Query 238686 TCTCCAAAGGAAGCTCTTAGATATAGT-ATTTATCTGAACGATAAATACGAACTCGACGG 238744 | || ||||||| ||| || | | || |||||||||||| ||| || || || Sbjct 439914 ACGCCCGAGGAAGCGCTT-GAGACGGCGATCTATCTGAACGATCGCTACAGTCTGGATGG 439972 Query 238745 TACGGATCCTAACGGATACGTAGGTTGTATGTGGTCAATATGTGGATTACACGAT-AGGG 238803 |||||| ||||| ||||| ||||| |||||||| || || | |||||| |||| Sbjct 439973 GCGGGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCGGGCATCCACGATCAGGG 440032 Query 238804 CATGGTCTGAGAGACCTATATTTGGAAAAGTTAGATACATGAATTATGAAGGAACTAAGA 238863 | ||| ||| | || ||||| ||| || | |||||||| ||||| ||| ||| Sbjct 440033 C-TGGAAGGAGCGCGAAATCTTTGGTAAAATTCGGTACATGAACTATGACGGATGCAAGC 440091 Query 238864 AAAAATTTGATGTAAATGCTTT 238885 ||||| | || ||||| || Sbjct 440092 GTAAATTCAACGTGAATGCGTT 440113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151243191135868