Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq7525 125 2e-23
>seq7525
Length=4038190
Score = 125 bits (138), Expect = 2e-23
Identities = 224/322 (70%), Gaps = 4/322 (1%)
Strand=Plus/Plus
Query 238566 GAGAGAGCCGAAACTCACGATCCCCTATGGAATTCCGCCCAGATACAAATGGTAAGACTA 238625
|||| ||| |||| || || || ||||| || |||||| | || ||||| |
Sbjct 439794 GAGACGGCCAAAACGCATGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGAAGGAG 439853
Query 238626 GGCAAAATGCATAGTTTCTTACGAATGTATTGGGCTAAAAAGATACTTGAATGGACTAGA 238685
||||| ||||| | ||| | || ||||| ||||| |||||||| || || ||||| | |
Sbjct 439854 GGCAAGATGCACGGCTTCCTGCGCATGTACTGGGCCAAAAAGATCCTGGAGTGGACGAAA 439913
Query 238686 TCTCCAAAGGAAGCTCTTAGATATAGT-ATTTATCTGAACGATAAATACGAACTCGACGG 238744
| || ||||||| ||| || | | || |||||||||||| ||| || || ||
Sbjct 439914 ACGCCCGAGGAAGCGCTT-GAGACGGCGATCTATCTGAACGATCGCTACAGTCTGGATGG 439972
Query 238745 TACGGATCCTAACGGATACGTAGGTTGTATGTGGTCAATATGTGGATTACACGAT-AGGG 238803
|||||| ||||| ||||| ||||| |||||||| || || | |||||| ||||
Sbjct 439973 GCGGGATCCGAACGGGTACGTCGGTTGCATGTGGTCGATCGCGGGCATCCACGATCAGGG 440032
Query 238804 CATGGTCTGAGAGACCTATATTTGGAAAAGTTAGATACATGAATTATGAAGGAACTAAGA 238863
| ||| ||| | || ||||| ||| || | |||||||| ||||| ||| |||
Sbjct 440033 C-TGGAAGGAGCGCGAAATCTTTGGTAAAATTCGGTACATGAACTATGACGGATGCAAGC 440091
Query 238864 AAAAATTTGATGTAAATGCTTT 238885
||||| | || ||||| ||
Sbjct 440092 GTAAATTCAACGTGAATGCGTT 440113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151243191135868
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |