Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq7552 109 5e-19 >seq7552 Length=2500597 Score = 109 bits (120), Expect = 5e-19 Identities = 132/178 (74%), Gaps = 4/178 (2%) Strand=Plus/Minus Query 5321 TCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAG 5380 ||||| || | ||| || || | || || |||||||| ||||||| ||| || ||| Sbjct 330405 TCGCAAATAAACTGTGCGATGCGATCACCTTTCTTAACTTCAAAGTT--TGTCTCGGAAT 330348 Query 5381 --TTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCA 5438 || ||||| || || ||||| || || |||||||| ||||||| || || ||||||| Sbjct 330347 GATTGAACAGTACAACTCCGACGTTACCCCGGTAGTCCTCGTCGACGACACCGGCGCCCA 330288 Query 5439 CGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTAGCAACC 5496 | ||||| |||| ||| || || | ||||||||||| || | || || ||||| || Sbjct 330287 CATCGATGAAGTTTTTCACGGCCAAACCGGAACGTGGAGCCACCCGGCCATAGCATCC 330230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447691515225520