Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq7587 89.7 3e-13
seq7509 86.0 3e-12
seq7521 84.2 1e-11
>seq7587
Length=1787124
Score = 89.7 bits (98), Expect = 3e-13
Identities = 76/92 (83%), Gaps = 2/92 (2%)
Strand=Plus/Minus
Query 11432 TATAGAATTAA-TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCG 11490
|||| ||| || |||| || || ||||| | || |||||||||| |||||||||||
Sbjct 932695 TATAAAATAAAATAAACCAT-AATTTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCG 932637
Query 11491 TTATTAGCACGACGCTCTRACCAACTGAGCTA 11522
|||||||||||||||||| |||| ||||||||
Sbjct 932636 TTATTAGCACGACGCTCTAACCAGCTGAGCTA 932605
Score = 87.8 bits (96), Expect = 9e-13
Identities = 75/92 (82%), Gaps = 1/92 (1%)
Strand=Plus/Plus
Query 11441 AATAAAAA-ATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499
|||||||| || ||||| | || |||||||||| ||||||||||||||||||||
Sbjct 968527 AATAAAAACATTTCTTTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCA 968586
Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531
||||||||| |||| |||||||| | |||||
Sbjct 968587 CGACGCTCTAACCAGCTGAGCTATGGAGCCGT 968618
Score = 86.0 bits (94), Expect = 3e-12
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||| | || |||||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct 928165 TGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 928106
Query 11516 TGAGCTAATGGGCCGT 11531
||||||| | |||||
Sbjct 928105 TGAGCTATGGAGCCGT 928090
Score = 86.0 bits (94), Expect = 3e-12
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501
||||||| | ||||| | || |||||||||| ||||||||||||||||||||||
Sbjct 933776 ATAAAAATATACCTTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACG 933717
Query 11502 ACGCTCTRACCAACTGAGCTA 11522
||||||| |||| ||||||||
Sbjct 933716 ACGCTCTAACCAGCTGAGCTA 933696
Score = 86.0 bits (94), Expect = 3e-12
Identities = 60/69 (87%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513
|||||| | || |||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 971207 ATTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCA 971266
Query 11514 ACTGAGCTA 11522
||||||||
Sbjct 971267 GCTGAGCTA 971275
Score = 84.2 bits (92), Expect = 1e-11
Identities = 59/68 (87%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
||||| | || |||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 931407 TTGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAG 931348
Query 11515 CTGAGCTA 11522
||||||||
Sbjct 931347 CTGAGCTA 931340
Score = 82.4 bits (90), Expect = 4e-11
Identities = 58/67 (87%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||| | || |||||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct 932231 TGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 932172
Query 11516 TGAGCTA 11522
|||||||
Sbjct 932171 TGAGCTA 932165
Score = 82.4 bits (90), Expect = 4e-11
Identities = 58/67 (87%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||| | || |||||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct 932953 TGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 932894
Query 11516 TGAGCTA 11522
|||||||
Sbjct 932893 TGAGCTA 932887
>seq7509
Length=4842924
Score = 86.0 bits (94), Expect = 3e-12
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||| | || |||||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct 1533256 TGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 1533315
Query 11516 TGAGCTAATGGGCCGT 11531
||||||| | |||||
Sbjct 1533316 TGAGCTATGGAGCCGT 1533331
Score = 84.2 bits (92), Expect = 1e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||| | || |||||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct 1531355 TGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 1531414
Query 11516 TGAGCTAATGGGCCG 11530
||||||| | ||||
Sbjct 1531415 TGAGCTATGGAGCCG 1531429
Score = 84.2 bits (92), Expect = 1e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||| | || |||||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct 1595714 TGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 1595655
Query 11516 TGAGCTAATGGGCCG 11530
||||||| | ||||
Sbjct 1595654 TGAGCTATGGAGCCG 1595640
>seq7521
Length=12184106
Score = 84.2 bits (92), Expect = 1e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||| | || |||||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct 799655 TGGCTCCAGAGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 799596
Query 11516 TGAGCTAATGGGCCG 11530
||||||| | ||||
Sbjct 799595 TGAGCTATGGAGCCG 799581
Lambda K H
0.638 0.410 0.920
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261457670372596
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |