Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq7517 129 5e-25
seq7521 109 5e-19
seq7535 102 7e-17
>seq7517
Length=11427604
Score = 129 bits (142), Expect = 5e-25
Identities = 158/214 (74%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCCT 94856
||||||||||| || || ||||| || | ||| || ||| || ||| || | || |
Sbjct 2898492 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCG--TCTT 2898435
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
||||||| || ||| | ||||| || | ||||||||||||||||| || || ||||| |
Sbjct 2898434 CCAGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCT 2898375
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
|| || ||||| ||| ||| ||||| | | ||||| || | ||||||||| |
Sbjct 2898374 GGATCTTGGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCT 2898315
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010
| ||||| || || ||||| ||||||||||| ||
Sbjct 2898314 TGCCAGTCAGCGTCTTCACGAAGATCTGCATCCT 2898281
Score = 127 bits (140), Expect = 2e-24
Identities = 157/213 (74%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGGAATCCT 94856
||||||||||| || || ||||| || | ||| || ||| || || || | || |
Sbjct 2898720 ACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGTCCG--TCTT 2898663
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
||||||| || ||| | ||||| || | ||||||||||||||||| || || ||||| |
Sbjct 2898662 CCAGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTGTCCT 2898603
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
|| || ||||| ||| ||| ||||| | | ||||| || | ||||||||| |
Sbjct 2898602 GGATCTTGGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCT 2898543
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
| ||||| || || ||||| |||||||||||||
Sbjct 2898542 TGCCAGTCAGCGTCTTCACGAAGATCTGCATGC 2898510
Score = 113 bits (124), Expect = 4e-20
Identities = 119/157 (76%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| |||||||| || ||| | ||||| || | ||||||||||||||||| || || |||
Sbjct 2898894 TCTTCCAGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCCTCCTTG 2898835
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || ||||| ||| ||| ||||| | | ||||| || | |||||||
Sbjct 2898834 TCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATG 2898775
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| || ||||| || || ||||| |||||||||||||
Sbjct 2898774 GTCTTGCCAGTCAGCGTCTTCACGAAGATCTGCATGC 2898738
>seq7521
Length=12184106
Score = 109 bits (120), Expect = 5e-19
Identities = 120/160 (75%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
|||||||||||| || ||| | ||||| | | ||||||||||| ||||| ||||| ||
Sbjct 9381190 ATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTCCTT 9381249
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | || |||||||| || ||| ||||| | | ||||| |||| |||||
Sbjct 9381250 GTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGTGAT 9381309
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011
||| || || || || |||||||| || ||||||||| ||
Sbjct 9381310 GGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCATGTTT 9381349
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| ||||| || | || || ||||| || | ||| || ||| || ||| | |
Sbjct 8321332 CGCAGCACCAGATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGGCCA 8321273
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||||||||| || ||| | ||||| | | ||||||||||| || || ||||| |||
Sbjct 8321272 TCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCTTCCTTG 8321213
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || ||||| || ||| || || | | | ||||| |||| || |||
Sbjct 8321212 TCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATG 8321153
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || ||||| || |||||||||||
Sbjct 8321152 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 8321118
>seq7535
Length=3646130
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||| || | |||||| ||||| || | |||||| || || ||| | |||||||
Sbjct 875826 ACCAGATGAAGAGTAGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTCC 875885
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| |||||| | ||||| | | ||||||||||| || || || || ||||| |
Sbjct 875886 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGG 875945
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || ||||| || | | || || | | || || || | |||||||| |||
Sbjct 875946 ATCTTCGCCTTCACATTCTCAATCGTATCCGATGGCTCAACTTCCAGGGTGATGGTCTTT 876005
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || ||||||||||| || ||||||||
Sbjct 876006 CCGGTCAGAGTTTTCACGAAAATCTGCAT 876034
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
|| || ||||| || | |||||| || || ||| | |||||||||||| |||||
Sbjct 876066 GTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTGCGGCCATCCTCCAGCTGCTTTCCA 876125
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
| ||||| | | ||||||||||| || || || || ||||| | || || |||||
Sbjct 876126 GCGAAGATCAGACGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTC 876185
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990
|| | | || || | | || || || | |||||||| ||||| || ||||||
Sbjct 876186 ACATTCTCAATCGTATCCGATGGCTCAACCTCGAGGGTGATGGTCTTTCCGGTCAGAGTT 876245
Query 94991 TTCACAAAGATCTGCAT 95007
||||| || ||||||||
Sbjct 876246 TTCACGAAAATCTGCAT 876262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448232244103560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |