Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq7619 197 2e-46
seq7529 188 1e-43
>seq7619
Length=78894
Score = 197 bits (218), Expect = 2e-46
Identities = 204/267 (76%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||| | |||||| ||||||||||| || || |||||||| || |||
Sbjct 71680 GCGAAGCGTCATCGTAAGGTTCTTCGTGATAACATCCAGGGTATTACCAAGCCGGCCATC 71621
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||||||||| ||||||||||| |||||| | ||||| || |||| || ||||
Sbjct 71620 CGCCGTCTGGCTCGCCGTGGTGGAGTGAAGCGTATTTCTGGCCTGATCTACGAGGAGACG 71561
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| || ||||| | ||||| ||| ||| |||| ||||||| | || ||||||
Sbjct 71560 CGTGGCGTACTGAAGGTGTTCCTGGAGAACGTGATCCGTGATGCTGTGACGTACACCGAG 71501
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || |||||||| |||||| | ||||| | ||||| || |||| || || |||
Sbjct 71500 CACGCCAAGCGTAAGACAGTCACCGCTATGGACGTTGTCTACGCGCTGAAGCGCCAGGGC 71441
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | || ||||| ||| |||||
Sbjct 71440 CGCACTCTGTACGGTTTCGGAGGTTAA 71414
Score = 109 bits (120), Expect = 9e-20
Identities = 84/100 (84%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||| | |||||| ||||||||||| || ||||||||||| || |||
Sbjct 72639 GCGAAGCGTCATCGTAAGGTTCTTCGTGATAACATCCAGGGCATCACCAAGCCGGCCATC 72580
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||||||||||| || ||||||||||| |||||| | ||||
Sbjct 72579 CGTCGTCTGGCGCGCCGTGGTGGAGTGAAGCGTATTTCTG 72540
>seq7529
Length=4681778
Score = 188 bits (208), Expect = 1e-43
Identities = 202/267 (76%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||||||| || || ||||||||||| || ||||||||||| || |||
Sbjct 1217795 GCCAAGCGTCATCGCAAGGTGCTGCGCGATAACATCCAGGGCATCACCAAGCCCGCCATC 1217736
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||||||||| ||||| || || |||||| |||| || || |||| |||||||
Sbjct 1217735 CGCCGTCTGGCTCGCCGTGGCGGCGTGAAGCGTATCTCCGGCCTGATCTACGAAGAGACG 1217676
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | ||| ||||| | ||||| ||| ||| |||| ||||| || ||| ||||||
Sbjct 1217675 CGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGATGCGGTCACCTACACCGAG 1217616
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || || ||||| ||||| | |||||| | || || || |||| || || |||
Sbjct 1217615 CACGCCAAGCGCAAGACGGTCACGGCGATGGATGTGGTGTACGCTCTGAAGCGCCAGGGC 1217556
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | | || || || ||| |||||
Sbjct 1217555 CGTACGCTCTACGGATTCGGAGGTTAA 1217529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79065580576053
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |