Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 369 5e-97
seq7526 109 7e-19
>seq7552
Length=2500597
Score = 369 bits (408), Expect = 5e-97
Identities = 1204/1855 (65%), Gaps = 34/1855 (2%)
Strand=Plus/Plus
Query 62016 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62075
|| || || ||||| ||||||||||| || ||||| | || | |||| || || |||
Sbjct 1134920 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAACCCCATCTTCCAGCCATAGAAA 1134979
Query 62076 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 62135
|| || ||| || ||| ||| | || || || | || || || | |||||
Sbjct 1134980 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 1135039
Query 62136 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 62195
|||||||| || || || | ||||| |||||||| ||| ||| || | || |||
Sbjct 1135040 TGATCGATAAACGCGCCACGATCTGCGGCCATTTTGATGCACGTTTTCACCGAGATCTCC 1135099
Query 62196 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTATTCT---GAATGGA 62251
|| | ||||| || | |||| ||| || | || | | | ||| | || ||
Sbjct 1135100 CATACCGTTTTGTACAGATCGCG-AATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGA 1135158
Query 62252 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62311
|||| | | || ||| ||||| || || || ||| | | | ||| ||
Sbjct 1135159 TCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAA 1135218
Query 62312 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 62371
| | || ||||| | || || || || || || || |||| || | || | ||||
Sbjct 1135219 ATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTA 1135278
Query 62372 AATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62431
|| || || ||||| || | ||| ||||| || || | |||||| || || || ||
Sbjct 1135279 AACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGC 1135338
Query 62432 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 62491
|||||||| || |||| || | ||| | || |||| | ||| || || ||
Sbjct 1135339 CGTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTT 1135398
Query 62492 TAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAAT 62551
| |||| ||||| ||||||| |||| | || | ||
Sbjct 1135399 CAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGAT 1135458
Query 62552 ACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTT 62610
|| || || | | || ||| | || || ||||| || || || | || | |
Sbjct 1135459 GCCCTTGCTCACCGGACTGCCCT-CGTACGTCTCGTACGGACCATCTCGAGCGGCCAACT 1135517
Query 62611 CACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTT 62670
|||| ||||| || | || ||||| || ||||||||||| || | || |||||| | ||
Sbjct 1135518 CACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGCTGATTTAGCTTTT 1135577
Query 62671 GTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAA 62730
| || || ||| || | ||||| | || || ||||| || || | || || |
Sbjct 1135578 GAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGCA 1135637
Query 62731 CACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAAT 62790
| || || ||||| || || || | | |||| ||| | ||| || || | ||||| |
Sbjct 1135638 CGCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAGT 1135697
Query 62791 AATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCA 62847
|||| | ||| || ||||| || ||||| | | || | ||| | | || |||||||
Sbjct 1135698 AATTGACATCAATGATTTTGTTCAGATTGCGCGTTACGGT--CTTAG-CGACTTCCTTCA 1135754
Query 62848 GTTTGAGAAAATCAAA----TCGCCCATCTATTACAAACATGTTCAAGGCAACAGATGCC 62903
| || ||| ||| | | | | || ||||||||||||||||||| | || |||
Sbjct 1135755 GCTTTGCAAAGTCATACGTTTTGTCTTGCT-TTACAAACATGTTCAAGGCGATCGAGGCC 1135813
Query 62904 AGATTACAAACGGCTACCTCATTAGCATC--CGCATATTGTATTATCTCAGTGCAAAGAT 62961
||||| || || |||||||||| | || || || | || || |||||||| | |
Sbjct 1135814 AGATTGCATACCGCTACCTCATC--CTTCGACGAGTACTCTACAATTTCAGTGCACAAGT 1135871
Query 62962 TACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 63021
| ||| ||||| || || | ||| || || ||||| || || || |||||||| |
Sbjct 1135872 TGGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGT 1135931
Query 63022 AAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 63081
| || ||| | || || ||||| | ||| ||||| || ||||| ||| | |
Sbjct 1135932 ACAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACAGATCCT 1135991
Query 63082 GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGA 63141
| ||||| | | | | | ||| | ||||| || |||| ||||
Sbjct 1135992 GCGCCTTCACCTGCCGCATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCGA 1136051
Query 63142 ACTCGTCTCCCCAAACATTGTCCAAT---CCAGGACATTCATCCGGACACATCAACGACC 63198
|||| || ||||| ||||| || || ||||| || | ||| ||||||| ||
Sbjct 1136052 ACTCTTCGCCCCAGG---TGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGACTCC 1136108
Query 63199 ACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATA 63258
|| | ||| ||| ||| || | ||| || || || || ||||| || || |||| |
Sbjct 1136109 ACATTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCG-TAAA-A 1136166
Query 63259 GATCTCTGGTTCTATGT--TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316
|| || || | | ||||| || || || || || || |||||||| ||| | |
Sbjct 1136167 CATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAA 1136226
Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376
|||||| ||||||||| || | || ||||| | |||||||||| ||||| || ||
Sbjct 1136227 TATATCACCATGCCACGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACC 1136286
Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436
|||||| | ||| | || || || || || || | || ||| || | | |||||| ||
Sbjct 1136287 CTGATCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGA 1136346
Query 63437 TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGAC 63495
|| || || ||||||||||| || |||| | || || ||| | | | | || |
Sbjct 1136347 AATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGGATAC-AGTGCACGTTCAGTC 1136405
Query 63496 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCT 63555
| || || || ||| || || |||| || || | || | |||||| ||||| ||||
Sbjct 1136406 CGATGCCACCGGCCGACTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCT 1136465
Query 63556 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 63615
| |||||||| ||| |||| | | || || ||| || | ||| |||| |||
Sbjct 1136466 CAATGCTATCTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGAGTGG 1136525
Query 63616 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63675
|||| ||| | || || || ||||| ||||| | || || || |||||||| |
Sbjct 1136526 CCGCCGCAAACATAGTTGGCGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGG 1136585
Query 63676 TCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 63735
|||| || |||| || || ||| ||| || || | || || ||||| | |||||
Sbjct 1136586 TCTCGATTGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGT 1136645
Query 63736 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 63795
|||| || | || ||||| || || || |||| |||||| ||| |||||| ||||
Sbjct 1136646 GCTGGGGGCGCTCGACGATTTTTCCCTTGATCTTCAGCAAGTATGATCGTTCCAAGGTTT 1136705
Query 63796 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63850
|||| || ||||||||||| ||||| || |||||||| || ||||||| ||
Sbjct 1136706 TAAAGCCGAAATAGTTGTACCCGAAGTCGCGATCGTAAATGATGGCCGAGTTCAG 1136760
>seq7526
Length=6110091
Score = 109 bits (120), Expect = 7e-19
Identities = 181/259 (70%), Gaps = 7/259 (3%)
Strand=Plus/Plus
Query 33292 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 33351
|| ||||||| || || || ||||||||||| || ||||| | || || |||||
Sbjct 4673124 TTGAACATCAGGCAGGCAAAGTCGCAGTGCAGCCCTTCGTCGCGCGAGATCAGCTCGTTC 4673183
Query 33352 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33411
|| || |||||||| ||||| ||||||||||| || ||||| || || | |||||
Sbjct 4673184 GAGAAGGTGAGTCCCGGCATCAGGCCACGCTTCTTCAGCCAGAAGATCGCGGCGAAGCTA 4673243
Query 33412 CCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 33471
|| |||||||| || || || ||||| || || | | | ||| ||| | |||
Sbjct 4673244 CCGCTGAAGAAGATACCCTCAACCGCAGCGAATGCCACGACCCGCTCGCCAAAGTTGGC- 4673302
Query 33472 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 33526
|| || || ||||| || | ||||| || |||||| || || || |||| ||
Sbjct 4673303 CT-TCTTGCTCGAGATCCAGTTCAGCGCCCAGTCCGCCTTCCGCTTCACGCACGGCAGCG 4673361
Query 33527 TTTCTATGGCATTAAAGAG 33545
|||| |||||||| || ||
Sbjct 4673362 TTTCGATGGCATTGAACAG 4673380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622865274656360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |