Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21] 10,521 sequences; 224,417,174 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq7525 183 3e-41 seq7552 104 2e-17 >seq7525 Length=4038190 Score = 183 bits (202), Expect = 3e-41 Identities = 225/305 (74%), Gaps = 2/305 (1%) Strand=Plus/Plus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 |||||||||| || || ||||| | || |||| ||| | || ||||| || || | Sbjct 439804 AAACGCATGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGAAGGAGGGCAAGATGC 439863 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789 |||| | ||| ||||||||||||||||||||||| || |||||||| |||| |||||| Sbjct 439864 ACGGCTTCCTGCGCATGTACTGGGCCAAAAAGATCCTGGAGTGGACGAAAACGCCCGAGG 439923 Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 | ||||| ||| | || ||||| |||||| | |||||||| || || || ||||| | Sbjct 439924 AAGCGCTTGAGACGGCGATCTATCTGAACGATCGCTACAGTCTGGATGGGCGGGATCCGA 439983 Query 71850 ACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTC-TTCACGATAGAAGCTTTTTAGAA 71908 |||| || ||||||||||||||| | | |||| | | |||||| ||| || Sbjct 439984 ACGGGTACGTCGGTTGCATGTGG-TCGATCGCGGGCATCCACGATCAGGGCTGGAAGGAG 440042 Query 71909 CGTCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAAT 71968 || || | |||||||||||||| || ||||| | | || ||| | || || ||||| Sbjct 440043 CGCGAAATCTTTGGTAAAATTCGGTACATGAACTATGACGGATGCAAGCGTAAATTCAAC 440102 Query 71969 GTGAA 71973 ||||| Sbjct 440103 GTGAA 440107 >seq7552 Length=2500597 Score = 104 bits (114), Expect = 2e-17 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 147447 AGATGCTGATTGACCACTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTA 147506 ||||| || || ||||| || ||||||||||||| || | | ||| | || Sbjct 1135229 AGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGAC 1135288 Query 147507 GTAAACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATG 147566 || ||||||||||||| || ||||| || ||||| ||||| || | ||||||||||| Sbjct 1135289 GTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATC 1135348 Query 147567 TAAGCAATCAATAATGAATTGCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCC 147626 || | || | |||||||| | ||||||| | || || | | ||| | |||| || Sbjct 1135349 GGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCC 1135408 Query 147627 CAGTTCCAAAGATCATTCGATT 147648 |||||||| ||||| ||| || Sbjct 1135409 CAGTTCCACAGATCCGTCGGTT 1135430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478599449911120