Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20coluzzii_20[genbank_20GCA_5F000150765.1_202008-04-21]
10,521 sequences; 224,417,174 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq7552 215 1e-50
seq7551 102 2e-16
>seq7552
Length=2500597
Score = 215 bits (238), Expect = 1e-50
Identities = 527/787 (67%), Gaps = 14/787 (2%)
Strand=Plus/Minus
Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489
||||| || | || || || ||||| ||||| ||| | ||||| ||||||||||| |||
Sbjct 1136676 ATCAAGGGAAAAATCGTCGAGCGCCCCCAGCACATGCTGATGCGCGTTGCTATTGGCATC 1136617
Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC 363549
||| || ||| | ||||| || || || || || || || || | ||| ||
Sbjct 1136616 CATGGCGAGGACATCGATGCAGCAATCGAGACCTACAATCTGCTGTCCGAGCGTTACTTT 1136557
Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGC 363609
|| |||||| ||||||| |||| || | |||| ||| ||| | || || |||
Sbjct 1136556 ACCCACGCCTCGCCAACTATGTTTGCGGCGGCCACTCAGCGTCCCCAGCTTTCGTCCTGC 1136497
Query 363610 TTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGT 363669
|| || | | ||| || ||| ||| ||||| |||| ||||| || ||| | |||
Sbjct 1136496 TTCCTGTTGACCATGTCCGAAGATAGCATTGAGGGCATCTACGACACGCTGAAGCAGTGT 1136437
Query 363670 GCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCACA 363728
|| || ||||| ||| || || || || || | | || | ||| | | || || |
Sbjct 1136436 GCCCTAATTTCAAAGTCGGCCGGTGGCATCGGACTGAACG-TGCACTGTATCCGCGCGAA 1136378
Query 363729 GAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTG 363787
| | ||||| ||| || | ||||| ||||| || ||||| || ||||| || |
Sbjct 1136377 GGGAACGTACATCTCCGGTACGAACGGGATT-TCGAACGGTCTGGTGCCGATGCTGCGCG 1136319
Query 363788 TGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTG 363847
| | ||||||| || |||||||||| |||||||| ||||| || || || |
Sbjct 1136318 TCTACAACAATACGGCACGGTACGTCGATCAGGGTGGCAACAAGCGGCCTGGAGCATTCG 1136259
Query 363848 CTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACA 363907
| || ||||||||||| |||| ||||| || |||||||| || || ||||||||
Sbjct 1136258 CCATCTATCTCGAGCCGTGGCATGGTGATATATTCGAGTTTCTCGATCTGAAGAAAAACA 1136199
Query 363908 CGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATT 363967
| || || ||||| | || ||||| || |||| || ||||| ||| | | |||| |
Sbjct 1136198 CCGGCAAGGAGGAGGTCCGCGCACGGGACATGTTTTACGCACTCTGGATACCGGACCTGT 1136139
Query 363968 TTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCT--TTTGCCCACACGAATGTCC 364025
| ||| |||| |||||||| | | ||| || | ||| | ||||| ||||| |||||
Sbjct 1136138 TCATGCAGCGTGTGGAGGC--GAACGAAATGTGGAGTCTGATGTGCCCGCACGATTGTCC 1136081
Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACT--ATGTTGCTCTATACGAAAAGTATGAATCG 364083
|| || || || ||||| || || | | ||| || ||| ||| ||
Sbjct 1136080 CGGGCTATCGGACACCTGGGGCGAAGAGTTCGAGAAGCTGTACACG--GGGTACGAGAAA 1136023
Query 364084 GAGGGAAAGGCTCGTAAGACA-ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142
||||| | | | | || | || ||| | || |||||||| ||||| || ||
Sbjct 1136022 GAGGG-TCGCTTTATGCGGCAGGTGAAGGCGCAGGATCTGTGGTTTGCGATCATCGAATC 1135964
Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202
|||| | || || || ||| || ||| ||||||| ||| | ||||| || || ||
Sbjct 1135963 GCAGGTGGAAACCGGCGTACCGTACATGCTGTACAAGGATGCTTGCAATCGTAAAAGTAA 1135904
Query 364203 CCAGCAG 364209
|||||||
Sbjct 1135903 CCAGCAG 1135897
>seq7551
Length=2192847
Score = 102 bits (112), Expect = 2e-16
Identities = 218/314 (69%), Gaps = 14/314 (4%)
Strand=Plus/Plus
Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547
||| ||| | || || || || || ||||| ||||||||||||||||| ||||||||
Sbjct 1923680 AGGGGATTTGGGCCCGGTATATGGGTTTCAGTGGCGCCACTTTGGTGCCACCTACAAAA- 1923738
Query 111548 CATG-CACGACTCATATGATTCA---CAGGGAACTGATCA-ATTACAGAATGTCATTGAT 111602
|||| |||||| || | || ||||||| ||||| | | ||| || || ||
Sbjct 1923739 CATGCCACGAC---GATTACACAGGTCAGGGAATAGATCAGCTGGCTGAA-GTGATCGAC 1923794
Query 111603 CAAATTAAGAACAA-CCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGC 111661
||||||||||||| ||| || |||||| || || ||| | || ||||| || ||
Sbjct 1923795 AAAATTAAGAACAATCCCTAC-GATCGTCGAATCATCATGTGCGCTTGGAATCCTTCTGA 1923853
Query 111662 ATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGC-CAGTTTTATGTACACGACG 111720
| || |||||||| || ||||| || || | || ||||||| || || |
Sbjct 1923854 TATTCCTAACATGGCACTACCGCCATGCCA-CTGCTTGGCACAGTTTTTCGTTAGTGATG 1923912
Query 111721 GGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTA 111780
| ||| || || || |||||||| || || || || | ||||| || || || ||||
Sbjct 1923913 GAGAGCTGTCGTGTCAGATGTATCAACGTTCGGCCGACGTAGGTCTGGGCGTGCCCTTTA 1923972
Query 111781 ATATTGCAAGTTAC 111794
| ||||| || |||
Sbjct 1923973 ACATTGCCAGCTAC 1923986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303177907527422
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